Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0535.Seq
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    68   5e-14
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    63   1e-12
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    63   1e-12
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.4  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 68.1 bits (159), Expect = 5e-14
 Identities = 29/38 (76%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
           QI +IVLVGGSTRIPK+Q+L++DFF+GKELN+ INPDE
Sbjct: 157 QIDEIVLVGGSTRIPKIQQLIKDFFDGKELNRGINPDE 194


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 63.3 bits (147), Expect = 1e-12
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +3

Query: 6   IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
           +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 159 VHEIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 63.3 bits (147), Expect = 1e-12
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +3

Query: 6   IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
           +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 159 VHEIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 60  LLQDFFNGKELNKSINPDE 116
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 185 ILHLLRLVTVQDSSLYSCTISY 120
           IL L + +T   SSLY+C   Y
Sbjct: 229 ILILAKCITSSLSSLYTCIAGY 250


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 397 QLEFTEQVVIFGHSTLTLKYLDEYSGLV 314
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 457 CQRYPQRFRYREVHQQGD 510
           C  Y    RY+E   QGD
Sbjct: 156 CMEYQHLHRYKEEALQGD 173


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 457 CQRYPQRFRYREVHQQGD 510
           C  Y    RY+E   QGD
Sbjct: 156 CMEYQHLHRYKEEALQGD 173


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 457 CQRYPQRFRYREVHQQGD 510
           C  Y    RY+E   QGD
Sbjct: 156 CMEYQHLHRYKEEALQGD 173


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 434 IEVTFDIDANGILNVSAIEKSTNK 505
           I+   D+D NG  N + ++K+  K
Sbjct: 71  IDPELDVDQNGFRNFTNLKKTHPK 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,222
Number of Sequences: 336
Number of extensions: 2267
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)