Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0535.Seq
(550 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 130 1e-31
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 129 2e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 107 1e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 94 1e-20
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 79 4e-16
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 41 1e-04
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 35 0.007
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 26 3.2
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 3.2
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 3.2
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 26 4.2
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 25 5.6
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 25 7.3
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 9.7
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 25 9.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 130 bits (315), Expect = 1e-31
Identities = 64/94 (68%), Positives = 70/94 (74%)
Frame = +2
Query: 254 LKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQ 433
+KRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+ IPPAPRGVPQ
Sbjct: 412 IKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQ 471
Query: 434 IEVTFDIDANGILNVSAIEKSTNKETRSTLPTIK 535
IEVTFD+DANGILNVSA+EK T K + T+ K
Sbjct: 472 IEVTFDVDANGILNVSALEKGTGKTQKITITNDK 505
Score = 93.1 bits (221), Expect = 2e-20
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQD 185
+++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE +L GD SE+ QD
Sbjct: 329 VNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQD 388
Query: 186 XXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
GIETAGGVMT L + T+P+
Sbjct: 389 LLLLDVAPLSMGIETAGGVMTPLIKRNTTIPT 420
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 511 KINITNDKGRLSK 549
KI ITNDKGRLSK
Sbjct: 498 KITITNDKGRLSK 510
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 129 bits (312), Expect = 2e-31
Identities = 63/94 (67%), Positives = 70/94 (74%)
Frame = +2
Query: 254 LKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQ 433
+KRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+ IPPAPRGVPQ
Sbjct: 412 IKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQ 471
Query: 434 IEVTFDIDANGILNVSAIEKSTNKETRSTLPTIK 535
IEVTFD+DANGILNVSA+EK T K + T+ K
Sbjct: 472 IEVTFDVDANGILNVSALEKGTGKTQKITITNDK 505
Score = 92.7 bits (220), Expect = 3e-20
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQD 185
+++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE IL GD SE+ QD
Sbjct: 329 VNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQD 388
Query: 186 XXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
GIETAGGVMT L + T+P+
Sbjct: 389 LLLLDVAPLSLGIETAGGVMTPLIKRNTTIPT 420
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 511 KINITNDKGRLSK 549
KI ITNDKGRLSK
Sbjct: 498 KITITNDKGRLSK 510
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 107 bits (257), Expect = 1e-24
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = +2
Query: 311 DNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAIE 490
DNQ VLIQV+EGER +TKDNNLLGKF+L IPPAPRGVPQIEVTF++DANG+L VSA++
Sbjct: 460 DNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVD 519
Query: 491 KS 496
KS
Sbjct: 520 KS 521
Score = 74.1 bits (174), Expect = 1e-14
Identities = 42/95 (44%), Positives = 53/95 (55%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE +L G++ +
Sbjct: 360 EIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD-- 416
Query: 183 DXXXXXXXXXXXGIETAGGVMTTLSSVTLPSPLNR 287
+ GIET GGVMT L P P +
Sbjct: 417 NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRK 451
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 94.3 bits (224), Expect = 1e-20
Identities = 41/72 (56%), Positives = 58/72 (80%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+D Q V I+VF+GER + +DN L+G F+LT I PAP+G PQIEV+FD+DA+GI+NVSA
Sbjct: 473 ADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSAR 532
Query: 488 EKSTNKETRSTL 523
+K+TNK++ T+
Sbjct: 533 DKATNKDSSITV 544
Score = 52.4 bits (120), Expect = 4e-08
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+I++++LVGG TR+P+V + ++ F +E KS+NPDE +L G V+
Sbjct: 376 EINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG----HVK 430
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
D GIET GGV T L + T+P+
Sbjct: 431 DLVLLDVTPLSLGIETLGGVFTRLINRNTTIPT 463
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 79.0 bits (186), Expect = 4e-16
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+DNQ V V++GER +N LG+F+LT IPP PRG ++E TF++DANGIL V+A+
Sbjct: 435 ADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAV 494
Query: 488 EKSTNK 505
EK+T +
Sbjct: 495 EKTTGR 500
Score = 74.1 bits (174), Expect = 1e-14
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQ 182
+HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE +L + S++ Q
Sbjct: 333 VHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQ 392
Query: 183 DXXXXXXXXXXXGIETAGGVMTTLSSVTLPSPLNRLR 293
D G+ G V + P P + R
Sbjct: 393 DLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKR 429
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 40.7 bits (91), Expect = 1e-04
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
+I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 364 EINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.1 bits (77), Expect = 0.007
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 337 LYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 101
I +++L GG++ PK+ L++ F + + +S
Sbjct: 355 ISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.2 bits (55), Expect = 3.2
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -2
Query: 495 DFSIAETLRIPLASMSKVTSI*GTPRGAGGIXVSSNLPSKLLSLVIARSPSNTWMSTPGW 316
+ S L IP+AS K S T G G S + P L++ + R+ S +
Sbjct: 479 NLSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERNSFRETESPKPF 538
Query: 315 LS 310
LS
Sbjct: 539 LS 540
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 264 TLPSPLNRLRHSPPTLITNPEYSSKYLR 347
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 392 ELTXIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKETRSTLPT 529
E+ PP PR VP + + + +++ K +++ R +LPT
Sbjct: 75 EIPSDPPLPRAVPTVRLGRSTSSRSRNSLNLDMKDPSEKPRRSLPT 120
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 409 WDXGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLS 287
WD G+ ++ I GHS +L L+ S L +S
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLENGSVLTANYNSASIS 101
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -1
Query: 346 LKYLDEYSGLVIRVGGECLSLFSGDGSVTLESVVMTPPAVSIP 218
L ++ SG + +C ++FS G +TL P S+P
Sbjct: 190 LGIVENMSGYICPHCADCTNIFSSGGGLTLSEKYKLPFLGSVP 232
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 16 LYWWVAPLVSPRCRSSCKISLMERSSTNLL 105
LYW V C+S IS + SST+LL
Sbjct: 540 LYWDVQAAKDVDCKSVVDISQLRVSSTSLL 569
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +1
Query: 439 GHLRHRCQRYPQRFRYREVHQQGDKINITNDKGRL 543
G + CQ+Y + YR+ +++ ++ ND ++
Sbjct: 27 GDVCFECQKYNENCVYRQFYRKIKRLKYNNDNSKI 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,196,963
Number of Sequences: 5004
Number of extensions: 38926
Number of successful extensions: 163
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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