Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0535.Seq
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 136 1e-32
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 2e-30
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 119 2e-27
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 103 1e-22
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 6e-21
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 62 4e-10
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 52 3e-07
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 29 3.3
SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 5.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 136 bits (328), Expect = 1e-32
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = +2
Query: 254 LKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQ 433
+KRN YSDNQPGVLIQVFEGER+MT NNLLGKFELT IPPAPRGVPQ
Sbjct: 416 IKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQ 475
Query: 434 IEVTFDIDANGILNVSAIEKSTNKETRSTLPTIK 535
IEVTFDIDANGILNVSA++KST KE + T+ K
Sbjct: 476 IEVTFDIDANGILNVSAVDKSTGKENKITITNDK 509
Score = 102 bits (244), Expect = 2e-22
Identities = 50/83 (60%), Positives = 56/83 (67%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQD 185
IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINPDE ILHGDK + V+D
Sbjct: 333 IHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKD 392
Query: 186 XXXXXXXXXXXGIETAGGVMTTL 254
GIETAGGVM+ L
Sbjct: 393 LLLLDVAPLSMGIETAGGVMSVL 415
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 508 DKINITNDKGRLSK 549
+KI ITNDKGRLSK
Sbjct: 501 NKITITNDKGRLSK 514
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 128 bits (310), Expect = 2e-30
Identities = 60/94 (63%), Positives = 72/94 (76%)
Frame = +2
Query: 254 LKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQ 433
+KRN YSDNQ VLIQV+EGER++TKDNNLLGKFEL+ IPPAPRGVPQ
Sbjct: 508 IKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQ 567
Query: 434 IEVTFDIDANGILNVSAIEKSTNKETRSTLPTIK 535
I+VTFD+D+NGILNVSA++KST KE + T+ K
Sbjct: 568 IDVTFDVDSNGILNVSAVDKSTGKENKITITNDK 601
Score = 102 bits (244), Expect = 2e-22
Identities = 52/93 (55%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPDE ILHGDKSE Q
Sbjct: 424 KIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQ 483
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
D G+ETAGGVMT + T+P+
Sbjct: 484 DLLLLDVAPLTLGLETAGGVMTAAIKRNTTIPT 516
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 508 DKINITNDKGRLSK 549
+KI ITNDKGRLSK
Sbjct: 593 NKITITNDKGRLSK 606
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 119 bits (286), Expect = 2e-27
Identities = 59/94 (62%), Positives = 67/94 (71%)
Frame = +2
Query: 254 LKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQ 433
++RN YSDNQP V I+VFEGER +TK NNLLGKF+L+ IPPAPRGVPQ
Sbjct: 415 IERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQ 474
Query: 434 IEVTFDIDANGILNVSAIEKSTNKETRSTLPTIK 535
IEVTFDIDANGILNVSA +KST K T+ K
Sbjct: 475 IEVTFDIDANGILNVSAKDKSTGKTGSITITNDK 508
Score = 96.7 bits (230), Expect = 1e-20
Identities = 46/83 (55%), Positives = 57/83 (68%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQD 185
IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE IL GDKS+EV+D
Sbjct: 332 IHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKD 391
Query: 186 XXXXXXXXXXXGIETAGGVMTTL 254
GIETAG VMT L
Sbjct: 392 VLLVDVAPLSLGIETAGEVMTKL 414
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 103 bits (247), Expect = 1e-22
Identities = 49/72 (68%), Positives = 57/72 (79%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+DNQ V IQVFEGER MTKDN+ LGKF+L IPPAPRGVPQIEVTF+ID NGIL VSA
Sbjct: 1127 ADNQNTVTIQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAE 1186
Query: 488 EKSTNKETRSTL 523
+K T + + T+
Sbjct: 1187 DKGTGNKEKITI 1198
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/86 (48%), Positives = 53/86 (61%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE +L G+ E+
Sbjct: 1027 EIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGE--EDTG 1084
Query: 183 DXXXXXXXXXXXGIETAGGVMTTLSS 260
+ GIET GGVMT L S
Sbjct: 1085 EVVLLDVNPLTLGIETVGGVMTKLIS 1110
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 97.5 bits (232), Expect = 6e-21
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+D Q V I+VF+GER M DN LLG+F+L IPPAPRGVPQ+EVTFDIDANGI+NVSA
Sbjct: 238 ADGQTQVEIKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSAR 297
Query: 488 EKSTNKE 508
+K T +E
Sbjct: 298 DKGTGRE 304
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE +L GD V+
Sbjct: 141 EIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VK 195
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
D GIET GGV T L + T+P+
Sbjct: 196 DVLLLDVTPLSLGIETLGGVFTKLITRNTTIPT 228
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE +L GD V+
Sbjct: 86 EIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQGGVLAGD----VK 140
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
D GIET GGV T L + T+P+
Sbjct: 141 DVLLLDVTPLSLGIETLGGVFTKLITRNTTIPT 173
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFEL 397
+D Q V I+VF+GER M DN LLG+F+L
Sbjct: 183 ADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 52.0 bits (119), Expect = 3e-07
Identities = 19/37 (51%), Positives = 33/37 (89%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 113
++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 363 EVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 51.6 bits (118), Expect = 4e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +3
Query: 15 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEV 179
++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K ++
Sbjct: 43 VILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKEADM 97
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
I +VLVGG R+PKVQ L EL K+IN DE
Sbjct: 315 IDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_29552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +2
Query: 338 VFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKETR 514
+FE ++ + + + G EL PPA V ++E +F+ +G+++ + S+ +E +
Sbjct: 125 IFEPRESVPRQSQVPGAMELLPPPPAVFNVNEVETSFEELKSGLMSSGNSDMSSLEELK 183
>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -1
Query: 472 EDTVGIDVEGDLNLRHATRRRWDXGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGEC 293
ED VGID EG+L++R R Q + T + TLK L + ++ G+
Sbjct: 402 EDDVGIDDEGNLHIRSVGRFNEGTYQCKATRLAGASSTAAFTLKILALNTPTILSAKGKA 461
Query: 292 LSLFSGDGSVTL 257
S D VT+
Sbjct: 462 -SFGPRDADVTI 472
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 221 TEGKGCYIKQQQILHLLRLVTVQDSSLYSCTISYGLVRVNRFVELLSIKEIL 66
T G I+QQQ LRLVT Q + + + L ++ FV LL K ++
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60
>SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 197 KQQQILHLLRLVTVQDSSLYSCTISYGLVRVNRFVELLSIKEILQELLHLGDTSGATHQ 21
KQ + LL + + + C +YG+V + L S +E L+ LHL T T Q
Sbjct: 473 KQVLVTSLLSAILAVQVASFDCAKNYGVVSWLNCLALQSGRESLETTLHLLQTMWETMQ 531
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 267 LPSPLNRLRHSPPTLITNP 323
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,201,967
Number of Sequences: 59808
Number of extensions: 332339
Number of successful extensions: 865
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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