Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0535.Seq
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 136 7e-33
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 134 3e-32
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 122 1e-28
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 122 1e-28
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 122 2e-28
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 108 3e-24
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 108 3e-24
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 95 2e-20
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 93 9e-20
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 93 9e-20
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 61 6e-10
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 53 1e-07
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 40 0.001
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 30 1.3
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 30 1.3
Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical pr... 28 3.9
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 27 8.9
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 136 bits (330), Expect = 7e-33
Identities = 66/94 (70%), Positives = 73/94 (77%)
Frame = +2
Query: 254 LKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQ 433
+KRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+ IPPAPRGVPQ
Sbjct: 415 IKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQ 474
Query: 434 IEVTFDIDANGILNVSAIEKSTNKETRSTLPTIK 535
IEVTFDIDANGILNVSA +KST K+ + T+ K
Sbjct: 475 IEVTFDIDANGILNVSATDKSTGKQNKITITNDK 508
Score = 108 bits (259), Expect = 3e-24
Identities = 57/93 (61%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE IL GDKSE VQ
Sbjct: 331 QVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQ 390
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
D GIETAGGVMT L + T+P+
Sbjct: 391 DLLLLDVAPLSLGIETAGGVMTALIKRNTTIPT 423
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 508 DKINITNDKGRLSK 549
+KI ITNDKGRLSK
Sbjct: 500 NKITITNDKGRLSK 513
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 134 bits (325), Expect = 3e-32
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = +2
Query: 254 LKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQ 433
+KRN YSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+ IPPAPRGVPQ
Sbjct: 415 IKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQ 474
Query: 434 IEVTFDIDANGILNVSAIEKSTNKETRSTLPTIK 535
IEVTFDIDANGILNVSA +KST K + T+ K
Sbjct: 475 IEVTFDIDANGILNVSATDKSTGKAKQITITNDK 508
Score = 108 bits (259), Expect = 3e-24
Identities = 57/93 (61%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE IL GDKSE VQ
Sbjct: 331 QVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSEAVQ 390
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
D GIETAGGVMT L + T+P+
Sbjct: 391 DLLLLDVAPLSLGIETAGGVMTALIKRNTTIPT 423
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 122 bits (295), Expect = 1e-28
Identities = 58/77 (75%), Positives = 65/77 (84%)
Frame = +2
Query: 305 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSA 484
Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+ IPPAPRGVPQIEVTFDIDANGILNVSA
Sbjct: 432 YADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSA 491
Query: 485 IEKSTNKETRSTLPTIK 535
+KST K R T+ K
Sbjct: 492 EDKSTGKSNRITIQNEK 508
Score = 93.9 bits (223), Expect = 7e-20
Identities = 46/84 (54%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE +L G K E ++
Sbjct: 331 KIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIK 390
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL 254
D GIETAGGVMT L
Sbjct: 391 DVLLVDVAPLSLGIETAGGVMTNL 414
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 122 bits (295), Expect = 1e-28
Identities = 58/77 (75%), Positives = 65/77 (84%)
Frame = +2
Query: 305 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSA 484
Y+DNQPGV IQV+EGERAMT+DN+ LG FEL+ IPPAPRGVPQIEVTFDIDANGILNVSA
Sbjct: 432 YADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSA 491
Query: 485 IEKSTNKETRSTLPTIK 535
+KST K R T+ K
Sbjct: 492 EDKSTGKSNRITIQNEK 508
Score = 93.9 bits (223), Expect = 7e-20
Identities = 46/84 (54%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE +L G K E ++
Sbjct: 331 KIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIK 390
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL 254
D GIETAGGVMT L
Sbjct: 391 DVLLVDVAPLSLGIETAGGVMTNL 414
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 122 bits (293), Expect = 2e-28
Identities = 55/73 (75%), Positives = 64/73 (87%)
Frame = +2
Query: 305 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSA 484
Y+DNQPGV IQV+EGERAMT+DN+ LG FELT IPPAPRGVPQ++VTFDIDANGILNVSA
Sbjct: 432 YADNQPGVSIQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGILNVSA 491
Query: 485 IEKSTNKETRSTL 523
+KST + R T+
Sbjct: 492 ADKSTGRSNRITI 504
Score = 90.2 bits (214), Expect = 8e-19
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
+I ++VLVGGSTRIPK+QKLL++FFNGK+LN SINPDE +L G K + ++
Sbjct: 331 RIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLSGVKDDTIK 390
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL 254
D GIETAGGVMT L
Sbjct: 391 DVLLVDVVPLSHGIETAGGVMTNL 414
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 108 bits (259), Expect = 3e-24
Identities = 49/72 (68%), Positives = 60/72 (83%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+DNQP V IQVFEGER MTKDN+ LGKF+LT +PPAPRGVPQIEVTF+ID NGIL+V+A
Sbjct: 460 ADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAE 519
Query: 488 EKSTNKETRSTL 523
+K T + + T+
Sbjct: 520 DKGTGNKNKITI 531
Score = 78.6 bits (185), Expect = 3e-15
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQD 185
+H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE ++ G+ E+ +
Sbjct: 361 VHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGE 418
Query: 186 XXXXXXXXXXXGIETAGGVMTTL 254
GIET GGVMT L
Sbjct: 419 IVLLDVNPLTMGIETVGGVMTKL 441
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 108 bits (259), Expect = 3e-24
Identities = 49/72 (68%), Positives = 60/72 (83%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+DNQP V IQVFEGER MTKDN+ LGKF+LT +PPAPRGVPQIEVTF+ID NGIL+V+A
Sbjct: 460 ADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAE 519
Query: 488 EKSTNKETRSTL 523
+K T + + T+
Sbjct: 520 DKGTGNKNKITI 531
Score = 78.6 bits (185), Expect = 3e-15
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQD 185
+H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE ++ G+ E+ +
Sbjct: 361 VHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGE 418
Query: 186 XXXXXXXXXXXGIETAGGVMTTL 254
GIET GGVMT L
Sbjct: 419 IVLLDVNPLTMGIETVGGVMTKL 441
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 95.5 bits (227), Expect = 2e-20
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+D Q V I+VF+GER M N LLG+F L IPPAPRGVPQ+EVTFDIDANGI+NVSA
Sbjct: 455 ADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSAR 514
Query: 488 EKSTNKE 508
++ T KE
Sbjct: 515 DRGTGKE 521
Score = 60.9 bits (141), Expect = 6e-10
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE +L GD V
Sbjct: 358 QIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD----VT 412
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
D GIET GG+MT L + T+P+
Sbjct: 413 DVLLLDVTPLSLGIETLGGIMTKLITRNTTIPT 445
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 93.5 bits (222), Expect = 9e-20
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+D+Q V I ++EGER M DN+ LG F++T IPPAPRGVPQIEVTF+ID NGIL+VSA
Sbjct: 88 ADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAE 147
Query: 488 EKSTNKETRSTL 523
+K T + + T+
Sbjct: 148 DKGTGNKNKLTI 159
Score = 55.6 bits (128), Expect = 2e-08
Identities = 30/71 (42%), Positives = 38/71 (53%)
Frame = +3
Query: 42 IPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXG 221
IPKVQ+L++D+FNGKE ++ INPDE ++ G E D G
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLG 58
Query: 222 IETAGGVMTTL 254
IET GGVMT L
Sbjct: 59 IETVGGVMTKL 69
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 93.5 bits (222), Expect = 9e-20
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAI 487
+D+Q V I ++EGER M DN+ LG F++T IPPAPRGVPQIEVTF+ID NGIL+VSA
Sbjct: 457 ADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAE 516
Query: 488 EKSTNKETRSTL 523
+K T + + T+
Sbjct: 517 DKGTGNKNKLTI 528
Score = 77.8 bits (183), Expect = 5e-15
Identities = 40/83 (48%), Positives = 50/83 (60%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQD 185
+H+IVLVGGSTRIPKVQ+L++D+FNGKE ++ INPDE ++ G E D
Sbjct: 358 VHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGD 415
Query: 186 XXXXXXXXXXXGIETAGGVMTTL 254
GIET GGVMT L
Sbjct: 416 VVLLDVNPLTLGIETVGGVMTKL 438
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 60.9 bits (141), Expect = 6e-10
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQ 182
QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE +L GD V
Sbjct: 358 QIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD----VT 412
Query: 183 DXXXXXXXXXXXGIETAGGVMTTL--SSVTLPS 275
D GIET GG+MT L + T+P+
Sbjct: 413 DVLLLDVTPLSLGIETLGGIMTKLITRNTTIPT 445
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 308 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTXI 406
+D Q V I+VF+GER M N LLG+F L I
Sbjct: 455 ADGQTQVQIKVFQGEREMATSNKLLGQFSLVGI 487
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +2
Query: 311 DNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAIE 490
D Q + + V+EGER + N LG+ L I P RG +++T ++D NGIL +A++
Sbjct: 429 DFQTSINVPVYEGERVLCSHNRQLGEISL-PIQPKRRGESVVDITLEVDYNGILQATALD 487
Query: 491 KSTNKETRSTL 523
+T K +T+
Sbjct: 488 LNTKKAITTTI 498
Score = 48.0 bits (109), Expect = 4e-06
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEV 179
QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PDE +L G +EEV
Sbjct: 327 QINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG--AEEV 384
Query: 180 QDXXXXXXXXXXXGIETAGGVMTTL 254
QD G++ M+ L
Sbjct: 385 QDMRLIDVIPMSIGVQCNRDYMSVL 409
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +2
Query: 311 DNQPGVLIQVFEGERAMTKDNNLLGKFELTXIPPAPRGVPQIEVTFDIDANGILNVSAIE 490
D Q + + V+EGER + N LG+ L I P RG +++T ++D NGIL +A++
Sbjct: 429 DFQTSINVPVYEGERVLCSHNRQLGEISL-PIQPKRRGESVVDITLEVDYNGILQATALD 487
Query: 491 KSTNKETRSTL 523
+T K +T+
Sbjct: 488 LNTKKAITTTI 498
Score = 48.0 bits (109), Expect = 4e-06
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEV 179
QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PDE +L G +EEV
Sbjct: 327 QINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG--AEEV 384
Query: 180 QDXXXXXXXXXXXGIETAGGVMTTL 254
QD G++ M+ L
Sbjct: 385 QDMRLIDVIPMSIGVQCNRDYMSVL 409
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
I VL+G TR+PKVQ+++Q KE+ K +N DE
Sbjct: 366 IDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +3
Query: 3 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
+I +I +VGGS+RIP ++++++D F GKE ++N DE
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDE 373
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 15 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
+VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 356 VVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 15 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 116
+VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 372 VVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 6 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 113
+ +IVLVGGST++P V+K++ FF K N ++P+
Sbjct: 363 VDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 416 PRGVPQIEVTFDIDANGILNVSAIEKSTNKETRSTLP 526
P+G+P+IEV D + + + + + N + +S LP
Sbjct: 672 PKGIPEIEVDKDFELHNDIKIPKVPNDDNYKPKSFLP 708
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 416 PRGVPQIEVTFDIDANGILNVSAIEKSTNKETRSTLP 526
P+G+P+IEV D + + + + + N + +S LP
Sbjct: 672 PKGIPEIEVDKDFELHNDIKIPKVPNDDNYKPKSFLP 708
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 416 PRGVPQIEVTFDIDANGILNVSAIEKSTNKETRSTLP 526
P+G+P+IEV D + + + + + N + +S LP
Sbjct: 672 PKGIPEIEVDKDFELHNDIKIPKVPNDDNYKPKSFLP 708
>Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical
protein H12D21.10 protein.
Length = 523
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 116 LVRVNRFVELLSIKEILQELLHLGDTSGATHQYN 15
L R F ++L+IKEIL+ L HL + S YN
Sbjct: 350 LSRSTAFRKILNIKEILRSLGHLPNVSTRVVDYN 383
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 387 LPSKLLSLVIARSPSNTW 334
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 387 LPSKLLSLVIARSPSNTW 334
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 387 LPSKLLSLVIARSPSNTW 334
+P+K+L+L I RSPS W
Sbjct: 26 IPTKMLALQIQRSPSTIW 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,285,570
Number of Sequences: 27780
Number of extensions: 227006
Number of successful extensions: 666
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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