Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0533.Seq
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    28   0.34 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   1.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   2.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   2.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   3.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   5.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.5  
AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione S-tran...    24   5.5  
AY994090-1|AAX86003.1|   85|Anopheles gambiae hyp6.2 precursor p...    23   7.2  

>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +2

Query: 245 VFHSVL-RWCAS-SLWRTVTVFLHRLVAVRLPQ 337
           +FHS+  + C + S+W TVT+ + R +AV  PQ
Sbjct: 132 MFHSIFAQICHTISIWLTVTLAIWRYIAVAYPQ 164


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 385 PPGPRASRGVRGP 423
           PPGP+ + G+RGP
Sbjct: 105 PPGPKGNPGLRGP 117


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 383 DHLDPVPRVECVVLHEPPSPTLDVIFVHGLYGSLSNT 493
           DHL P P  +C +L   P+ T+ +      +  +S+T
Sbjct: 223 DHLLPSPAEQCRILASKPAETIKIDTSGRAFDRMSST 259


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 383 DHLDPVPRVECVVLHEPPSPTLDVIFVHGLYGSLSNT 493
           DHL P P  +C +L   P+ T+ +      +  +S+T
Sbjct: 224 DHLLPSPAEQCRILASKPAETIKIDTSGRAFDRMSST 260


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 325  QTAANQSETSQNEAQGAGDRPPGPRASR 408
            + AA ++ T Q +A+     PP PR  R
Sbjct: 1062 RNAARRAATQQRQAERLPPPPPSPRTER 1089


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 313  ISRRQTAANQSETSQNEAQGAGDRPPGPRASRGVRGPARAAFSYPRRH 456
            ++RRQ     +E+S +E  G+G    G  +  G  G A    S P  H
Sbjct: 1490 LNRRQRKKQHTESSDDENGGSGG---GSGSGAGGAGSAGPNHSSPSNH 1534


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 493 LASRRWKPTYKSEPELKTLINHTSKTLDNADSVKTNNAIADNDN 624
           L S R + +      L    ++ S   +N+ S   NN I+ N+N
Sbjct: 177 LRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNN 220


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 493 LASRRWKPTYKSEPELKTLINHTSKTLDNADSVKTNNAIADNDN 624
           L S R + +      L    ++ S   +N+ S   NN I+ N+N
Sbjct: 177 LRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNN 220


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 493 LASRRWKPTYKSEPELKTLINHTSKTLDNADSVKTNNAIADNDN 624
           L S R + +      L    ++ S   +N+ S   NN I+ N+N
Sbjct: 129 LRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNN 172


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +1

Query: 364 AQGAGD-RP--PGPRASRGVRGP 423
           A G G+ RP  PGP+  RG  GP
Sbjct: 402 APGGGEGRPGAPGPKGPRGYEGP 424


>AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione
           S-transferase u3 protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +1

Query: 466 WAIRILKQHLASRRWKP---TYKSEPELKTLINH 558
           W  + +  +LA + +KP    Y SEP+ + LINH
Sbjct: 66  WESKAIVTYLAEQ-YKPGCTLYPSEPKKRGLINH 98


>AY994090-1|AAX86003.1|   85|Anopheles gambiae hyp6.2 precursor
           protein.
          Length = 85

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 232 SDCTRISFGATVVCFELMEDGHRFPASISRR 324
           +D  R++ GAT +  +    G RF   +SRR
Sbjct: 46  ADIGRLATGATKLFGQFWNTGTRFGTELSRR 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,493
Number of Sequences: 2352
Number of extensions: 15510
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)