Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0533.Seq
(724 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051500-1|AAK92924.1| 688|Drosophila melanogaster GH15286p pro... 39 0.006
AE014297-3956|AAN14075.1| 688|Drosophila melanogaster CG5455-PC... 39 0.006
AE014297-3955|AAN14074.1| 688|Drosophila melanogaster CG5455-PB... 39 0.006
AE014297-3954|AAF56596.1| 688|Drosophila melanogaster CG5455-PA... 39 0.006
AY051587-1|AAK93011.1| 523|Drosophila melanogaster GH23377p pro... 35 0.13
AE014134-2961|AAF53691.1| 784|Drosophila melanogaster CG10383-P... 35 0.13
DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 prot... 31 1.2
AE014296-300|AAF47521.2| 1509|Drosophila melanogaster CG12105-PA... 31 1.2
AY089417-1|AAL90155.1| 238|Drosophila melanogaster AT24169p pro... 31 2.1
>AY051500-1|AAK92924.1| 688|Drosophila melanogaster GH15286p
protein.
Length = 688
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Frame = +2
Query: 419 VLHEPP--SPT-LDVIFVHGLYGSLSNTWRQG 505
+L EPP P D++ +HGL+GSL NTW+QG
Sbjct: 265 ILAEPPPGQPIRADIVLIHGLHGSLVNTWKQG 296
>AE014297-3956|AAN14075.1| 688|Drosophila melanogaster CG5455-PC,
isoform C protein.
Length = 688
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Frame = +2
Query: 419 VLHEPP--SPT-LDVIFVHGLYGSLSNTWRQG 505
+L EPP P D++ +HGL+GSL NTW+QG
Sbjct: 265 ILAEPPPGQPIRADIVLIHGLHGSLVNTWKQG 296
>AE014297-3955|AAN14074.1| 688|Drosophila melanogaster CG5455-PB,
isoform B protein.
Length = 688
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Frame = +2
Query: 419 VLHEPP--SPT-LDVIFVHGLYGSLSNTWRQG 505
+L EPP P D++ +HGL+GSL NTW+QG
Sbjct: 265 ILAEPPPGQPIRADIVLIHGLHGSLVNTWKQG 296
>AE014297-3954|AAF56596.1| 688|Drosophila melanogaster CG5455-PA,
isoform A protein.
Length = 688
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Frame = +2
Query: 419 VLHEPP--SPT-LDVIFVHGLYGSLSNTWRQG 505
+L EPP P D++ +HGL+GSL NTW+QG
Sbjct: 265 ILAEPPPGQPIRADIVLIHGLHGSLVNTWKQG 296
>AY051587-1|AAK93011.1| 523|Drosophila melanogaster GH23377p
protein.
Length = 523
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 440 PTLDVIFVHGLYGSLSNTWRQGD 508
P D++FVHGL G + TWRQ D
Sbjct: 92 PKADIVFVHGLLGGVFITWRQRD 114
>AE014134-2961|AAF53691.1| 784|Drosophila melanogaster CG10383-PA
protein.
Length = 784
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 440 PTLDVIFVHGLYGSLSNTWRQGD 508
P D++FVHGL G + TWRQ D
Sbjct: 353 PKADIVFVHGLLGGVFITWRQRD 375
>DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 protein.
Length = 1387
Score = 31.5 bits (68), Expect = 1.2
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = +1
Query: 307 ASISRRQTAANQSETSQNEAQGAGDRPPGPRASRGVRGPARAAFSYPRRHLRPWAIRILK 486
A++ +++ Q S EA AG++PP P S P + P ++P I ++
Sbjct: 1074 ATLVHEESSPEQQSQSSAEATKAGEQPP-PGDSLATM-PELKVLAGP---VQPVKIETVE 1128
Query: 487 Q-HLASRRWKPTYKSEP-ELKTLINHTS-----KTLDNADSVKTNNAIADNDNVTAGNEV 645
Q H A++ + K +P LK L+ S + + DS K +N + D + + NE+
Sbjct: 1129 QPHDAAKNQESLVKKKPTHLKKLVRKNSIDKETEKQEKNDSSKLSNILRDRNKI---NEL 1185
Query: 646 NGSFKRILP 672
+ ++ P
Sbjct: 1186 SSRINKLTP 1194
>AE014296-300|AAF47521.2| 1509|Drosophila melanogaster CG12105-PA
protein.
Length = 1509
Score = 31.5 bits (68), Expect = 1.2
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = +1
Query: 307 ASISRRQTAANQSETSQNEAQGAGDRPPGPRASRGVRGPARAAFSYPRRHLRPWAIRILK 486
A++ +++ Q S EA AG++PP P S P + P ++P I ++
Sbjct: 1168 ATLVHEESSPEQQSQSSAEATKAGEQPP-PGDSLATM-PELKVLAGP---VQPVKIETVE 1222
Query: 487 Q-HLASRRWKPTYKSEP-ELKTLINHTS-----KTLDNADSVKTNNAIADNDNVTAGNEV 645
Q H A++ + K +P LK L+ S + + DS K +N + D + + NE+
Sbjct: 1223 QPHDAAKNQESLVKKKPTHLKKLVRKNSIDKEPEKQEKNDSSKLSNILRDRNKI---NEL 1279
Query: 646 NGSFKRILP 672
+ ++ P
Sbjct: 1280 SSRINKLTP 1288
>AY089417-1|AAL90155.1| 238|Drosophila melanogaster AT24169p
protein.
Length = 238
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +1
Query: 484 KQHLASRRWKPTYKSEPELKTLINHTSKTLDNADSVKTNNAIADNDNVTAG-NEVNGS-- 654
K + +++ KP Y + EL + ++K +ADSVK+ +N+N T G E GS
Sbjct: 11 KDNKKTKKKKPNYLATDELYKTLEESAKLATDADSVKS----MENENRTEGPTESTGSAM 66
Query: 655 ----FKRILPNE 678
F + PNE
Sbjct: 67 KSLEFSLLYPNE 78
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,106,232
Number of Sequences: 53049
Number of extensions: 682381
Number of successful extensions: 3022
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3018
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -