Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0533.Seq
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69794-5|CAA93682.1|  506|Caenorhabditis elegans Hypothetical pr...    38   0.010
Z69789-6|CAA93652.1|  506|Caenorhabditis elegans Hypothetical pr...    38   0.010
Z81543-3|CAB04425.1|  322|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical p...    29   4.4  
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti...    28   5.9  
Z81030-6|CAB02710.1|  342|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z70782-10|CAN86639.1|  456|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z70782-9|CAA94840.1|  453|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z69794-5|CAA93682.1|  506|Caenorhabditis elegans Hypothetical
           protein F17H10.1 protein.
          Length = 506

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = +2

Query: 440 PTLDVIFVHGLYGSLSNTWRQGDGNQH 520
           P +D++ +HGL GS++ TWRQ D +++
Sbjct: 265 PEIDIVLIHGLRGSVAYTWRQKDSDEN 291


>Z69789-6|CAA93652.1|  506|Caenorhabditis elegans Hypothetical
           protein F17H10.1 protein.
          Length = 506

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = +2

Query: 440 PTLDVIFVHGLYGSLSNTWRQGDGNQH 520
           P +D++ +HGL GS++ TWRQ D +++
Sbjct: 265 PEIDIVLIHGLRGSVAYTWRQKDSDEN 291


>Z81543-3|CAB04425.1|  322|Caenorhabditis elegans Hypothetical
           protein F49B2.3 protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 349 TSQNEAQGAGDRPPGPRASRGVRGPARAAFSYPRRH 456
           TS+   + +G+RPP PR   G + P R A  Y + H
Sbjct: 143 TSRTSTRDSGNRPPPPRERSGTQ-PVRQAAGYDQGH 177


>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
           protein T19D12.4b protein.
          Length = 1015

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +1

Query: 13  RNLNYQFKSYFVS*IDQTNIELDNVFRLYQQGQTIVNVISGFASTLCQDNQRLA*T--RW 186
           +N +Y F +Y    ++Q + + D  F ++  G    +VISG +    QD    A T   W
Sbjct: 785 QNKDYDFMNYITKLLNQFSTQDDTHFSMFAYGAFKTSVISGLSVHSSQDISNFAVTYEDW 844

Query: 187 R 189
           R
Sbjct: 845 R 845


>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
           protein T19D12.4a protein.
          Length = 1028

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +1

Query: 13  RNLNYQFKSYFVS*IDQTNIELDNVFRLYQQGQTIVNVISGFASTLCQDNQRLA*T--RW 186
           +N +Y F +Y    ++Q + + D  F ++  G    +VISG +    QD    A T   W
Sbjct: 798 QNKDYDFMNYITKLLNQFSTQDDTHFSMFAYGAFKTSVISGLSVHSSQDISNFAVTYEDW 857

Query: 187 R 189
           R
Sbjct: 858 R 858


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 304 PASISRRQTAANQSETSQNEAQGAGDRPPGPRASRGVRGPARAAFSYPRRHLRP 465
           P +  RR  +A++S  +   A+     PP PR     R P+++    PRR   P
Sbjct: 407 PPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRR---RSPSQSKSPAPRRRRSP 457


>Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical
           protein F35E12.10 protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 517 TYKSEPELKTLINHTSKTLDNADSVKTNNAIADNDNVTAGNEV 645
           T+ S P  K  + H  KT D  D+      + D DN+T    +
Sbjct: 160 TFNSSPNDKVRVAHGKKTSDAEDNALDQIFVYDGDNLTTAKMI 202


>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
           protein 5 protein.
          Length = 1198

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 604 AIADNDNVTAGNEVNGSFKRILPNEEAL 687
           A  D D++  GNE  G+  RILP E  L
Sbjct: 400 ATNDVDSIGQGNETGGTSMRILPRESQL 427


>Z81030-6|CAB02710.1|  342|Caenorhabditis elegans Hypothetical
           protein C01G10.8 protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +1

Query: 472 IRILKQHLASRRWKPTYKSEPELKTLINHTSKTLDNADSVKTNNAIADNDNVTAGNEV 645
           IR LK+  +     PT K +P++ T    T KT         N  +A+ D  T+GNEV
Sbjct: 154 IRELKEEFSKGLILPTDKVKPQVVT----TGKTSVVDKRQFQNTVVAEKDASTSGNEV 207


>Z70782-10|CAN86639.1|  456|Caenorhabditis elegans Hypothetical
           protein R04B5.4b protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 61  QTNIELDNVFRLYQQGQTIVNVISG 135
           Q +IE+ N+F +Y   +  VN+I+G
Sbjct: 429 QEDIEMANIFNIYALPENFVNIING 453


>Z70782-9|CAA94840.1|  453|Caenorhabditis elegans Hypothetical
           protein R04B5.4a protein.
          Length = 453

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 61  QTNIELDNVFRLYQQGQTIVNVISG 135
           Q +IE+ N+F +Y   +  VN+I+G
Sbjct: 426 QEDIEMANIFNIYALPENFVNIING 450


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,705,726
Number of Sequences: 27780
Number of extensions: 333211
Number of successful extensions: 1209
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)