Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0533.Seq
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.55 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     24   1.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   8.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 188 GVT*NTSTKWRTRQRQTAPVFH 253
           G+  +T  KWR  ++  AP FH
Sbjct: 125 GLLISTGQKWRNHRKLIAPTFH 146


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 25  YQFKSYFVS*IDQTNIELDNVFRLYQQGQTIVNVISGFASTLCQDNQ 165
           + FK Y ++  + TN +  N+F+L Q  +  +N I   A TL +D +
Sbjct: 151 WPFKEYQMNGNNITNFKNSNIFQLKQHMRDTMNKI---AETLDEDTK 194


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 577 NADSVKTNNAIADNDNVTAGN 639
           NAD+   NN  ADN N    N
Sbjct: 436 NADNQNANNQNADNQNANKQN 456


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 663 PFKAPVDFIPGRYVIVIGYSVISFNAV 583
           PF+  +D   G  V V+G+   SFN +
Sbjct: 279 PFQHFLDSFAGSDVTVLGWGHTSFNGM 305


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -2

Query: 222 VRHFVEVFHVTPPSCLSQAL 163
           +RH    +H   P C+ + L
Sbjct: 322 IRHIKSPYHTPEPDCIHELL 341


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,846
Number of Sequences: 438
Number of extensions: 4070
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)