Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0532.Seq
(570 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin rece... 28 0.25
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 1.3
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 25 1.7
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 25 1.7
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 25 2.3
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 4.0
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 4.0
AF515524-1|AAM61891.1| 218|Anopheles gambiae glutathione S-tran... 24 4.0
AY994090-1|AAX86003.1| 85|Anopheles gambiae hyp6.2 precursor p... 23 5.3
X98186-1|CAA66861.1| 269|Anopheles gambiae put. S3a ribosomal p... 23 9.3
AY146743-1|AAO12103.1| 192|Anopheles gambiae odorant-binding pr... 23 9.3
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 9.3
>AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin
receptor protein.
Length = 427
Score = 27.9 bits (59), Expect = 0.25
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 245 VFHSVL-RWCAS-SLWRTVTVFLHRLVAVRLPQ 337
+FHS+ + C + S+W TVT+ + R +AV PQ
Sbjct: 132 MFHSIFAQICHTISIWLTVTLAIWRYIAVAYPQ 164
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.4 bits (53), Expect = 1.3
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 385 PPGPRASRGVRGP 423
PPGP+ + G+RGP
Sbjct: 105 PPGPKGNPGLRGP 117
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 25.0 bits (52), Expect = 1.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 383 DHLDPVPRVECVVLHEPPSPTLDVIFVHGLYGSLSNT 493
DHL P P +C +L P+ T+ + + +S+T
Sbjct: 223 DHLLPSPAEQCRILASKPAETIKIDTSGRAFDRMSST 259
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 25.0 bits (52), Expect = 1.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 383 DHLDPVPRVECVVLHEPPSPTLDVIFVHGLYGSLSNT 493
DHL P P +C +L P+ T+ + + +S+T
Sbjct: 224 DHLLPSPAEQCRILASKPAETIKIDTSGRAFDRMSST 260
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 325 QTAANQSETSQNEAQGAGDRPPGPRASR 408
+ AA ++ T Q +A+ PP PR R
Sbjct: 1062 RNAARRAATQQRQAERLPPPPPSPRTER 1089
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.8 bits (49), Expect = 4.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 313 ISRRQTAANQSETSQNEAQGAGDRPPGPRASRGVRGPARAAFSYPRRH 456
++RRQ +E+S +E G+G G + G G A S P H
Sbjct: 1490 LNRRQRKKQHTESSDDENGGSGG---GSGSGAGGAGSAGPNHSSPSNH 1534
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.8 bits (49), Expect = 4.0
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Frame = +1
Query: 364 AQGAGD-RP--PGPRASRGVRGP 423
A G G+ RP PGP+ RG GP
Sbjct: 402 APGGGEGRPGAPGPKGPRGYEGP 424
>AF515524-1|AAM61891.1| 218|Anopheles gambiae glutathione
S-transferase u3 protein.
Length = 218
Score = 23.8 bits (49), Expect = 4.0
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 466 WAIRILKQHLASRRWKP---TYKSEPELKTLINH 558
W + + +LA + +KP Y SEP+ + LINH
Sbjct: 66 WESKAIVTYLAEQ-YKPGCTLYPSEPKKRGLINH 98
>AY994090-1|AAX86003.1| 85|Anopheles gambiae hyp6.2 precursor
protein.
Length = 85
Score = 23.4 bits (48), Expect = 5.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 232 SDCTRISFGATVVCFELMEDGHRFPASISRR 324
+D R++ GAT + + G RF +SRR
Sbjct: 46 ADIGRLATGATKLFGQFWNTGTRFGTELSRR 76
>X98186-1|CAA66861.1| 269|Anopheles gambiae put. S3a ribosomal
protein homologue protein.
Length = 269
Score = 22.6 bits (46), Expect = 9.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 58 DQTNIELDNVFRLYQQGQTIVNVISG 135
D +++ N+F+ Q G+T+VN G
Sbjct: 29 DWYDVKAPNMFKNRQSGKTLVNRTQG 54
>AY146743-1|AAO12103.1| 192|Anopheles gambiae odorant-binding
protein AgamOBP11 protein.
Length = 192
Score = 22.6 bits (46), Expect = 9.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 232 TLPCPPFCGSISRDAAILFKPSVGYLD 152
+LPCP C + + +P YLD
Sbjct: 142 SLPCPDRCTAAYKQELCFQEPIAKYLD 168
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 22.6 bits (46), Expect = 9.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 176 KQDGGVT*NTSTKWRTR 226
+Q+G T + T+WRTR
Sbjct: 223 RQEGPSTRESGTRWRTR 239
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,342
Number of Sequences: 2352
Number of extensions: 12235
Number of successful extensions: 26
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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