Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0532.Seq
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69794-5|CAA93682.1| 506|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z69789-6|CAA93652.1| 506|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 31 0.77
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 30 1.3
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70782-10|CAN86639.1| 456|Caenorhabditis elegans Hypothetical p... 28 5.4
Z70782-9|CAA94840.1| 453|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z93381-1|CAB07604.1| 509|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z69794-5|CAA93682.1| 506|Caenorhabditis elegans Hypothetical
protein F17H10.1 protein.
Length = 506
Score = 37.5 bits (83), Expect = 0.007
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 440 PTLDVIFVHGLYGSLSNTWRQGDGNQH 520
P +D++ +HGL GS++ TWRQ D +++
Sbjct: 265 PEIDIVLIHGLRGSVAYTWRQKDSDEN 291
>Z69789-6|CAA93652.1| 506|Caenorhabditis elegans Hypothetical
protein F17H10.1 protein.
Length = 506
Score = 37.5 bits (83), Expect = 0.007
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 440 PTLDVIFVHGLYGSLSNTWRQGDGNQH 520
P +D++ +HGL GS++ TWRQ D +++
Sbjct: 265 PEIDIVLIHGLRGSVAYTWRQKDSDEN 291
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 349 TSQNEAQGAGDRPPGPRASRGVRGPARAAFSYPRRH 456
TS+ + +G+RPP PR G + P R A Y + H
Sbjct: 143 TSRTSTRDSGNRPPPPRERSGTQ-PVRQAAGYDQGH 177
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 13 RNLNYQFKSYFVS*IDQTNIELDNVFRLYQQGQTIVNVISGFASTLCQDNQRLA*T--RW 186
+N +Y F +Y ++Q + + D F ++ G +VISG + QD A T W
Sbjct: 785 QNKDYDFMNYITKLLNQFSTQDDTHFSMFAYGAFKTSVISGLSVHSSQDISNFAVTYEDW 844
Query: 187 R 189
R
Sbjct: 845 R 845
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 13 RNLNYQFKSYFVS*IDQTNIELDNVFRLYQQGQTIVNVISGFASTLCQDNQRLA*T--RW 186
+N +Y F +Y ++Q + + D F ++ G +VISG + QD A T W
Sbjct: 798 QNKDYDFMNYITKLLNQFSTQDDTHFSMFAYGAFKTSVISGLSVHSSQDISNFAVTYEDW 857
Query: 187 R 189
R
Sbjct: 858 R 858
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 304 PASISRRQTAANQSETSQNEAQGAGDRPPGPRASRGVRGPARAAFSYPRRHLRP 465
P + RR +A++S + A+ PP PR R P+++ PRR P
Sbjct: 407 PPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRR---RSPSQSKSPAPRRRRSP 457
>Z70782-10|CAN86639.1| 456|Caenorhabditis elegans Hypothetical
protein R04B5.4b protein.
Length = 456
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 61 QTNIELDNVFRLYQQGQTIVNVISG 135
Q +IE+ N+F +Y + VN+I+G
Sbjct: 429 QEDIEMANIFNIYALPENFVNIING 453
>Z70782-9|CAA94840.1| 453|Caenorhabditis elegans Hypothetical
protein R04B5.4a protein.
Length = 453
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 61 QTNIELDNVFRLYQQGQTIVNVISG 135
Q +IE+ N+F +Y + VN+I+G
Sbjct: 426 QEDIEMANIFNIYALPENFVNIING 450
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 212 KWRTRQRQTAPVFHSVLRWCASSLWRTVTVFLHRLVAVRLPQI-KAR-PVKTKLRVPGTD 385
+W+ + + +H R CA+ +++ L ++ + P I + R PV T + V ++
Sbjct: 8 RWKEAKERIGNAYHDYGRLCAAHPKACLSMSLLTMIVLSYPTITRLRLPVSTPIDVFWSE 67
Query: 386 HLDPVPRVECVVLHEPPSPTLDVIFV 463
HL ++ ++E P+ + V
Sbjct: 68 HLHVNDKIAPFWINENPASYIQQFIV 93
>Z93381-1|CAB07604.1| 509|Caenorhabditis elegans Hypothetical
protein F28G4.1 protein.
Length = 509
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 188 GVT*NTSTKWRTRQRQTAPVFH 253
G+ +T +KWR R++ P FH
Sbjct: 125 GLLTSTGSKWRQRRKMLTPAFH 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,876,972
Number of Sequences: 27780
Number of extensions: 270774
Number of successful extensions: 953
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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