Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0532.Seq
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.40 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     24   0.92 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   6.5  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   8.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   8.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 188 GVT*NTSTKWRTRQRQTAPVFH 253
           G+  +T  KWR  ++  AP FH
Sbjct: 125 GLLISTGQKWRNHRKLIAPTFH 146


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 25  YQFKSYFVS*IDQTNIELDNVFRLYQQGQTIVNVISGFASTLCQDNQ 165
           + FK Y ++  + TN +  N+F+L Q  +  +N I   A TL +D +
Sbjct: 151 WPFKEYQMNGNNITNFKNSNIFQLKQHMRDTMNKI---AETLDEDTK 194


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -1

Query: 222 VRHFVEVFHVTPPSCLSQAL 163
           +RH    +H   P C+ + L
Sbjct: 322 IRHIKSPYHTPEPDCIHELL 341


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 554 FIRVFNSGSLLY 519
           +IR+F +GS+LY
Sbjct: 139 YIRIFPNGSVLY 150


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 554 FIRVFNSGSLLY 519
           +IR+F +GS+LY
Sbjct: 139 YIRIFPNGSVLY 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,256
Number of Sequences: 438
Number of extensions: 3435
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)