Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0531.Seq
         (763 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            28   0.36 
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   3.4  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    24   5.9  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 419  ITYFHRLAKREAVTHSVHQITDDGFRRNNRV 511
            ++ F  L  +E V    HQIT DGF  N R+
Sbjct: 1056 LSQFGMLTNQEGVLTGNHQITYDGFHWNKRL 1086


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +2

Query: 404 KGIW*ITYFHRLAKREAVTHSVHQITDDGFRRNNRVSVWVYQGPIINLPASTCFFTRSLF 583
           KGI+   Y+    ++E + H V  I  + F R     V   +GP +  P +         
Sbjct: 240 KGIFVEVYYAESPRKEILPHEVGLILSNRFGRYQPFLVGYCKGPELVKPTAALAGGSGTV 299

Query: 584 SGFTRNNLR 610
            G ++ ++R
Sbjct: 300 GGRSKRSVR 308


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 346 FWRGCSERHG 317
           FWR CS  HG
Sbjct: 20  FWRACSNNHG 29


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 470 HQITDDGFRRNNRVSVWVYQGPIINL 547
           H IT DG RRN  V   +  GP I +
Sbjct: 332 HCITGDGVRRNVAVINRMMPGPAIEV 357


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,617
Number of Sequences: 2352
Number of extensions: 19587
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)