Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0531.Seq
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 33 0.22
AC199169-9|ABO33255.1| 435|Caenorhabditis elegans Hypothetical ... 29 3.6
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 28 6.3
U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 28 6.3
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 28 6.3
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 28 6.3
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 28 6.3
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 28 6.3
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -1
Query: 679 RSCADWNRTTNTNITYSTGKRRSSKIISRETGKQRPCEETGRSRQVDYRPLVYPDRYTIV 500
+ C +++ T+ + YSTG R++ I+R G + P + VD++ L+ T+
Sbjct: 107 KRCEEFDEVTDISKEYSTGTRKTKANIARALGLEPPAQSILDGNFVDFKSLLSNGLKTVK 166
Query: 499 SAE 491
E
Sbjct: 167 DVE 169
>AC199169-9|ABO33255.1| 435|Caenorhabditis elegans Hypothetical
protein F38A1.4 protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 427 IGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQS 287
+ Y+PD S H + FG T FW G S +D F W +
Sbjct: 74 LAYVPDQHTNSFLASHARSVFGTTDGSFWIGLSRNSSSD--SFTWDN 118
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 742 GIESGISPPKSHVFCWSIIWKRSCADWNRTTNTNITYSTGKRRSSK 605
G GI P ++V C + + K CA W R N N+ R SK
Sbjct: 618 GPAEGILPKGTYVICKADMLKEDCAVW-RVDNQNLLQKFPPFRDSK 662
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 742 GIESGISPPKSHVFCWSIIWKRSCADWNRTTNTNITYSTGKRRSSK 605
G GI P ++V C + + K CA W R N N+ R SK
Sbjct: 633 GPAEGILPKGTYVICKADMLKEDCAVW-RVDNQNLLQKFPPFRDSK 677
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 742 GIESGISPPKSHVFCWSIIWKRSCADWNRTTNTNITYSTGKRRSSK 605
G GI P ++V C + + K CA W R N N+ R SK
Sbjct: 618 GPAEGILPKGTYVICKADMLKEDCAVW-RVDNQNLLQKFPPFRDSK 662
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 742 GIESGISPPKSHVFCWSIIWKRSCADWNRTTNTNITYSTGKRRSSK 605
G GI P ++V C + + K CA W R N N+ R SK
Sbjct: 633 GPAEGILPKGTYVICKADMLKEDCAVW-RVDNQNLLQKFPPFRDSK 677
>U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical
protein R151.1 protein.
Length = 377
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 630 EYVIFVFVV--LFQSAQDLFHIIDQQNT*LFGGEIPLSIPV 746
+Y I +F V F QD+FHI + N EIP + P+
Sbjct: 216 QYKISIFAVDDSFCHNQDVFHIFNTTNATFSSSEIPKTTPI 256
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 742 GIESGISPPKSHVFCWSIIWKRSCADWNRTTNTNITYSTGKRRSSK 605
G GI P ++V C + + K CA W R N N+ R SK
Sbjct: 618 GPAEGILPKGTYVICKADMLKEDCAVW-RVDNQNLLQKFPPFRDSK 662
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 742 GIESGISPPKSHVFCWSIIWKRSCADWNRTTNTNITYSTGKRRSSK 605
G GI P ++V C + + K CA W R N N+ R SK
Sbjct: 633 GPAEGILPKGTYVICKADMLKEDCAVW-RVDNQNLLQKFPPFRDSK 677
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 742 GIESGISPPKSHVFCWSIIWKRSCADWNRTTNTNITYSTGKRRSSK 605
G GI P ++V C + + K CA W R N N+ R SK
Sbjct: 633 GPAEGILPKGTYVICKADMLKEDCAVW-RVDNQNLLQKFPPFRDSK 677
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 276 LPSLLCHKNSVLSVPWRSEHPRQNMV 353
+P+ CH+ V W EHP N++
Sbjct: 443 MPNRRCHERMVTCCAWLDEHPANNLL 468
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 276 LPSLLCHKNSVLSVPWRSEHPRQNMV 353
+P+ CH+ V W EHP N++
Sbjct: 441 MPNRRCHERMVTCCAWLDEHPANNLL 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,255,221
Number of Sequences: 27780
Number of extensions: 446931
Number of successful extensions: 1268
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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