Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0531.Seq
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   5.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.1  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   7.1  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 509 VSVWVYQGPIINLPASTCF 565
           V+VWV  G I + P   CF
Sbjct: 161 VAVWVLAGAITSPPLLGCF 179


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 27  IPLQSGSSQTYVEGRSHVAYPSLR 98
           + L+SG   T+++   H A+ S+R
Sbjct: 187 VTLESGERVTFLDTPGHAAFISMR 210


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 411 IPLACPGNCRISTMDLAL 358
           IP  C GNC+++ + L +
Sbjct: 238 IPQVCSGNCKLNDILLTV 255


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 411 IPLACPGNCRISTMDLAL 358
           IP  C GNC+++ + L +
Sbjct: 238 IPQVCSGNCKLNDILLTV 255


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 478 NLMYGMRDCLAFGEPMKIGY 419
           +LMY ++ C  F EP+ + Y
Sbjct: 71  DLMYQIQQCGKFKEPVAVFY 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,605
Number of Sequences: 438
Number of extensions: 5602
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)