Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0526.Seq
(670 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 167 3e-40
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 119 6e-26
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 117 2e-25
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 117 3e-25
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 99 8e-20
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 99 8e-20
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 99 1e-19
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 98 2e-19
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 94 2e-18
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 84 3e-15
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 75 2e-12
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 8e-11
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 69 1e-10
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 66 5e-10
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 66 7e-10
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 66 7e-10
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 64 2e-09
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 64 4e-09
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 63 7e-09
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 62 9e-09
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 62 1e-08
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 62 2e-08
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 61 2e-08
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 61 3e-08
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 59 1e-07
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 58 3e-07
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 57 3e-07
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 55 2e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 53 5e-06
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 52 2e-05
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 51 3e-05
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 48 2e-04
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 46 8e-04
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 46 0.001
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 45 0.001
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 42 0.018
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 38 0.17
UniRef50_A6RU12 Cluster: Putative uncharacterized protein; n=1; ... 38 0.22
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 38 0.29
UniRef50_Q980D5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.67
UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 36 1.2
UniRef50_A0MNG0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 35 2.0
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 35 2.0
UniRef50_Q6ABZ1 Cluster: Serine/threonine kinase; n=1; Leifsonia... 34 2.7
UniRef50_A2Y1D8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 34 3.6
UniRef50_UPI00005A065A Cluster: PREDICTED: similar to interferon... 33 4.7
UniRef50_A7EZE6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_UPI0000EBDEE2 Cluster: PREDICTED: hypothetical protein;... 33 6.2
UniRef50_Q287X1 Cluster: Large protein; n=1; Beilong virus|Rep: ... 33 6.2
UniRef50_A3ZPF5 Cluster: DNA polymerase III gamma and tau subuni... 33 6.2
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 33 6.2
UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1; ... 33 6.2
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 33 8.2
UniRef50_A4J9V1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin... 33 8.2
UniRef50_Q2HB43 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 8.2
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 167 bits (405), Expect = 3e-40
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
KVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKS
Sbjct: 90 KVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKS 149
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
MKFVDGLMIHSGDP N YV+TA RH
Sbjct: 150 MKFVDGLMIHSGDPVNYYVDTAVRH 174
Score = 153 bits (372), Expect = 3e-36
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 182
SKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRR
Sbjct: 6 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 65
Query: 183 IRELTSVVQKRFNIPEQSVELYAER 257
IRELT+VVQKRF PE SVELYAE+
Sbjct: 66 IRELTAVVQKRFGFPEGSVELYAEK 90
Score = 84.2 bits (199), Expect = 3e-15
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = +1
Query: 508 LLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 660
+LLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 175 VLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 119 bits (287), Expect = 6e-26
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 182
SKKRKF DGVF A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGEKG++
Sbjct: 6 SKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGKK 65
Query: 183 IRELTSVVQKRFNIPEQSVELYAER 257
I+ELTSVVQKRF E SVEL AE+
Sbjct: 66 IKELTSVVQKRFEFLENSVELCAEK 90
Score = 58.8 bits (136), Expect = 1e-07
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
KV RG AIAQAESLRYKL+GGLA+ L QRAKS
Sbjct: 90 KVNNRGFYAIAQAESLRYKLLGGLAM--------------------------LCAQRAKS 123
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
MKF DG +I SG P DY++ A RH
Sbjct: 124 MKFKDGYLISSGQPVKDYIDLAVRH 148
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +1
Query: 511 LLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEP 624
+LRQGVLGIKVKIM WD +GK P PD + + P
Sbjct: 149 VLRQGVLGIKVKIMFNWDPKGKQSLTTPLPDLVTIQTP 186
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 117 bits (282), Expect = 2e-25
Identities = 53/86 (61%), Positives = 67/86 (77%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
+V RGL A+AQAESLR+KL+ L VRRA G++R++MESGA+GCEV + GK++GQRAKS
Sbjct: 141 RVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKIKGQRAKS 200
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRHC 511
M F DG MI SG +V+TATRHC
Sbjct: 201 MTFRDGYMIKSGTAHKHFVDTATRHC 226
Score = 116 bits (279), Expect = 5e-25
Identities = 56/85 (65%), Positives = 70/85 (82%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 182
SKKR V DGVF AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGRR
Sbjct: 57 SKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRR 116
Query: 183 IRELTSVVQKRFNIPEQSVELYAER 257
IRELT+ +Q+RFN E ++L+AER
Sbjct: 117 IRELTACLQQRFNYKEGKLQLFAER 141
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 117 bits (281), Expect = 3e-25
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 182
SKK+K V DGVF AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GRR
Sbjct: 7 SKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66
Query: 183 IRELTSVVQKRFNIPEQSVELYAER 257
I ELTS++ KRF + + + +YAER
Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAER 91
Score = 111 bits (267), Expect = 1e-23
Identities = 51/85 (60%), Positives = 63/85 (74%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
+V RGL A QAE+L+ KL+ GL +RRA YGVLRF M +GA+G EVV+SGKLR RAKS
Sbjct: 91 RVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLRAARAKS 150
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
K+ DG MIHSG P D+++ A RH
Sbjct: 151 QKYADGFMIHSGQPTRDFIDIAIRH 175
Score = 37.5 bits (83), Expect = 0.29
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +1
Query: 508 LLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRS 669
+L+RQGVLGIKVKIM + GP + PD + + E KDE + P V+S
Sbjct: 176 VLMRQGVLGIKVKIMKD-PAANRFGP-RALPDAVKIAEAKDEDEVI-PAPTVKS 226
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 99.1 bits (236), Expect = 8e-20
Identities = 43/85 (50%), Positives = 59/85 (69%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
++ +GL A+ Q ESLRYKLI + RRA Y ++RF+M++GARGCEV +SGKLRG RA +
Sbjct: 91 RIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKLRGARAST 150
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
K+ +G M+ SGD +V A H
Sbjct: 151 SKYKEGYMVKSGDVTKQFVTQAVGH 175
Score = 89.8 bits (213), Expect = 5e-17
Identities = 40/85 (47%), Positives = 60/85 (70%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 182
+K R+ + G+F AELNE LTREL ++GY G EVR TP R+EIII A T+ + GRR
Sbjct: 7 TKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDNHGRR 66
Query: 183 IRELTSVVQKRFNIPEQSVELYAER 257
++E+ ++QKR+ + E S+E++ +R
Sbjct: 67 LQEVRMMIQKRWRLKEDSLEIFIDR 91
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 514 LRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 630
++Q +GI+V IML D G +GPK+ QPD I V E KD
Sbjct: 178 MKQATIGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 99.1 bits (236), Expect = 8e-20
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +2
Query: 242 IVC*KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 421
IV KV +GLCA+ QA +R K++GG+ RRA L+ + A+GC+++VSGKL+GQ
Sbjct: 97 IVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQ 156
Query: 422 RAKSMKFVDGLMIHSGDPCNDYVNT 496
RAKS+KF DG++IHSGD DY+NT
Sbjct: 157 RAKSVKFQDGVLIHSGDAVKDYINT 181
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/81 (30%), Positives = 48/81 (59%)
Frame = +3
Query: 15 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 194
+F+ +G+ AEL EF + L +G+S +E+R+ +II+ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 195 TSVVQKRFNIPEQSVELYAER 257
+ +R +P++SVE+ E+
Sbjct: 81 QHLAAQRLEVPDESVEIVVEK 101
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +1
Query: 499 YQTLLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 630
Y T+ +QGV+GI+V+IMLP+D +G GP P PD I + EP +
Sbjct: 183 YATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +2
Query: 329 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRH 508
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF DG MI SG+P DY+ + TRH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +1
Query: 496 CYQTLLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 651
C + LLRQG +G++VKIML D +G++GP P PD +++ PK++ +P
Sbjct: 86 CTRHALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAKP 137
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 97.9 bits (233), Expect = 2e-19
Identities = 41/83 (49%), Positives = 61/83 (73%)
Frame = +2
Query: 266 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFV 445
+GLCA AQ E++ YKL+ + VR A +++ +++ GA+GCE+++SGKL+ QRAK+MKF
Sbjct: 107 KGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISGKLKQQRAKTMKFK 166
Query: 446 DGLMIHSGDPCNDYVNTATRHCF 514
G MI +G P NDY++ A RH F
Sbjct: 167 QGYMICTGQPKNDYIDVAVRHVF 189
Score = 93.1 bits (221), Expect = 6e-18
Identities = 40/84 (47%), Positives = 62/84 (73%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 182
+KK+KFV DGVF AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G++
Sbjct: 19 NKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGKK 78
Query: 183 IRELTSVVQKRFNIPEQSVELYAE 254
+ELT +QKRF + ++++AE
Sbjct: 79 HKELTQFLQKRFGYSDDQIQIWAE 102
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Frame = +1
Query: 508 LLLRQGVLGIKVKIMLPWDQQ--GKNGPKKPQPDHILVTEPK 627
+ +QG++G+KVKIMLP++ K G K P PD++++ PK
Sbjct: 188 VFFKQGIMGVKVKIMLPYEPNPAKKFGVKTPIPDNVIIHPPK 229
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 173
SKKR+FV DG+F+AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK
Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62
Score = 75.8 bits (178), Expect = 9e-13
Identities = 39/77 (50%), Positives = 48/77 (62%)
Frame = +2
Query: 362 IMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHCFSGKEY*ESR 541
+ ESGA+G E +VSGKL+GQRAKS KFVD MIHS D N YV+T+ H + S+
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139
Query: 542 SKSCCRGTSKARTARRS 592
+SC GT A RS
Sbjct: 140 CRSCFPGTQAVTLALRS 156
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
K+ RGL A ++LR KL + +RRA Y ++R M +GA GCEV+V+GKLR QRA++
Sbjct: 96 KIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGKLRAQRARA 155
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
KF +G +I +G P ++ ATRH
Sbjct: 156 NKFKEGCLISTGHPKRIFLAEATRH 180
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/81 (24%), Positives = 44/81 (54%)
Frame = +3
Query: 15 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 194
K++ D + +AEL+EF +REL + GY+ + T +II + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 195 TSVVQKRFNIPEQSVELYAER 257
++ RF ++ ++ ++
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDK 96
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/85 (49%), Positives = 50/85 (58%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
K R AIAQAESLR+KL+GGL VRRA YGVL F+MESG +GCEV
Sbjct: 144 KFNNRVFYAIAQAESLRFKLLGGLVVRRAGYGVLSFVMESGTKGCEV------------- 190
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
+ +I SG P DY+N+ RH
Sbjct: 191 ---IGWYIISSGQPVKDYINSVVRH 212
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = +3
Query: 126 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERWLLVVF 275
EIII AT+TQ+VLG+KGR+IRELTSVVQKRF E +VELYAE++ VF
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVF 150
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 436 EVCRWTHDPLWRPLQ*LRQHCYQTLLLRQGVLGIKVKIMLPWDQQGKNGP 585
EV W +P++ + +LL+QGVL IKVKI++ QG+ GP
Sbjct: 189 EVIGWYIISSGQPVKDYINSVVRHVLLKQGVLSIKVKIIVRLGSQGQAGP 238
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +3
Query: 69 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 203
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK RRIREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
+R F+ + V + ++EFL +EL GY G++++ TP+ +++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 189 ELTSVVQKRFNIPEQSVEL 245
ELT +++K+F + +E+
Sbjct: 64 ELTRILEKQFGLENPQIEV 82
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +2
Query: 272 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 451
L A QA L L G+ RRA Y LR IM +GARG E+ +SGKL G+RAKS++F G
Sbjct: 90 LNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQG 149
Query: 452 LMIHSGDPCNDYVN 493
+ G+P V+
Sbjct: 150 YLAKVGNPAETLVS 163
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +3
Query: 69 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 206
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3
Query: 69 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 203
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGRRIRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +3
Query: 69 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 164
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 66.1 bits (154), Expect = 7e-10
Identities = 25/79 (31%), Positives = 54/79 (68%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
+++F+ DG+ + +++EF EL GY G++V TP+ ++I++ A + V+G+ G+ IR
Sbjct: 4 EQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIR 63
Query: 189 ELTSVVQKRFNIPEQSVEL 245
++T+ ++ RFN+ + V++
Sbjct: 64 KITTELEDRFNLDDPQVDV 82
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = +2
Query: 290 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 469
A+ L L G R+A + + IMESGA G E+V+SGK+ G R++ KF G + H+G
Sbjct: 96 ADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNG 155
Query: 470 DPCNDYVNT 496
+P + V++
Sbjct: 156 EPAEEIVDS 164
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2
Query: 272 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 451
L A A L + G R+A + LR +M +GA GCEVV+SGKL G R++ KFVDG
Sbjct: 90 LNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARSRVEKFVDG 149
Query: 452 LMIHSGDPCNDYVN 493
+ HSG+P + V+
Sbjct: 150 YIKHSGNPVEEVVD 163
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/78 (32%), Positives = 50/78 (64%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
++KFV DG KA ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 189 ELTSVVQKRFNIPEQSVE 242
+LT V ++++ ++
Sbjct: 64 KLTRDVANKYSLENPQID 81
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +2
Query: 290 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 469
A L L G RRA Y L IME+GA+GCE+ +SGKL +RA++ KFV G ++H+G
Sbjct: 95 ASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTG 154
Query: 470 DPCNDYV 490
DP V
Sbjct: 155 DPAESMV 161
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
+RKFV + + K + E++ E+ G+ GV++ TP+ +++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 189 ELTSVVQKRFNI--PEQSVE 242
LT + K F I P+ SV+
Sbjct: 64 ALTEKL-KDFGIENPQVSVD 82
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEII 134
SK+RKFV GVF A LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 86 SKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +2
Query: 290 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 469
A L L G+ RRA YG LR IM +GA+G +++SGKL G RA++ KF++G + + G
Sbjct: 104 ARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCG 163
Query: 470 DPCNDYV 490
+P ++Y+
Sbjct: 164 EPGDEYM 170
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +3
Query: 12 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 191
+KFV G+ K EL+E+L EL GY G+ ++ P ++II R +G +GR IR
Sbjct: 12 KKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRR 71
Query: 192 LTSVVQKRF 218
+ VQ+RF
Sbjct: 72 VEEEVQERF 80
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/79 (32%), Positives = 50/79 (63%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
++KF+ DGV + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 189 ELTSVVQKRFNIPEQSVEL 245
+LT + ++I VE+
Sbjct: 64 QLTQDLATDYDIESPQVEV 82
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2
Query: 290 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 469
AE L L G R+A +R IMESGA GCEV+V+GKL G R+++ KF +G + H G
Sbjct: 96 AERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCG 155
Query: 470 DPCNDYV 490
+P V
Sbjct: 156 EPSETIV 162
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 508 LLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 627
+LLRQGVLGIKVKIML WD GK GPK P PD++++ PK
Sbjct: 32 VLLRQGVLGIKVKIMLDWDPTGKLGPKTPLPDNVVIHMPK 71
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2
Query: 419 QRAKSMKFVDGLMIHSGDPCNDYVNTATRH 508
QRAKSMKF DG M+ SG P +Y+++A RH
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRH 31
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/79 (30%), Positives = 51/79 (64%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
++ FV +G+ + ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 189 ELTSVVQKRFNIPEQSVEL 245
+T ++ +F++ VE+
Sbjct: 63 AITQKLKNKFDLENPQVEV 81
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +2
Query: 290 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 469
A + L G+ RR Y +R IM +GA+G EV +SGK+RG R+ + KF DG + G
Sbjct: 95 AHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCG 154
Query: 470 DPCNDYV 490
+P +V
Sbjct: 155 EPSVKHV 161
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +2
Query: 320 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVN 493
G+ R+ + +R +M SGA+G ++VSGKL G+R+++ KF+DG M H G+P VN
Sbjct: 105 GMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVN 162
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/79 (29%), Positives = 46/79 (58%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
+R FVG+ V + ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 189 ELTSVVQKRFNIPEQSVEL 245
ELT + +++ +E+
Sbjct: 63 ELTETLATEYSVKNPQIEV 81
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
+V + L A A + L+ G+ RRA L IM +GARG E+V+SGKL QR ++
Sbjct: 85 EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRT 144
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
KF G + SG+P + V+ A H
Sbjct: 145 EKFTRGYVPKSGEPGEELVDEAIVH 169
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/78 (29%), Positives = 41/78 (52%)
Frame = +3
Query: 12 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 191
RK + G+ LNE+L R+L Y + TPI +++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 192 LTSVVQKRFNIPEQSVEL 245
+ V+++ F I +++
Sbjct: 66 IAEVLEREFGIENPQIDV 83
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
KR F+ + K +++E+L ++ Y+GVEV TPI + +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 189 ELTSVVQKRFNIPEQSVEL 245
+L + +K F + + +
Sbjct: 65 QLAQIFEKVFGLENPQITI 83
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +2
Query: 272 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 451
L A A L L G RRA + +R IM +GA G E+++SGKL +RA+ K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEG 150
Query: 452 LMIHSGDPCNDYVNTA 499
++ SG ++ A
Sbjct: 151 IVYKSGQQLEKMIDRA 166
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/77 (31%), Positives = 50/77 (64%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
K+ F+ + + +++E+L + GYS VE++ TP+ + +II A R+ +++G +G+ I+
Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68
Query: 189 ELTSVVQKRFNIPEQSV 239
++T V+++ F IP V
Sbjct: 69 QITKVLEEWFGIPNPQV 85
Score = 54.4 bits (125), Expect = 2e-06
Identities = 35/85 (41%), Positives = 44/85 (51%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
KV L A A L L G RRA Y LR IM +GA G +V VSGKLRG+RA+
Sbjct: 89 KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARF 148
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
K++ G + SG+ + A H
Sbjct: 149 EKYIAGKVYKSGNQVVRLTDRAIAH 173
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/81 (30%), Positives = 46/81 (56%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
KR F+ K ++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 189 ELTSVVQKRFNIPEQSVELYA 251
+L V++K F + + + A
Sbjct: 65 QLAQVLEKFFGLENPQITVTA 85
Score = 50.4 bits (115), Expect = 4e-05
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = +2
Query: 272 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 451
L A A L L G RRA + +R IM SGA G EV+VSGKL +RAK K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEG 150
Query: 452 LMIHSGDPCNDYVNTA 499
+ SG ++ A
Sbjct: 151 TVYKSGQQLEKIIDRA 166
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 53.2 bits (122), Expect = 5e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +3
Query: 69 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 209
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3
Query: 45 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 224
+L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 225 PEQSVEL 245
V++
Sbjct: 76 KSPQVDV 82
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 320 GLAVRRACYGVLRFIMES-GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 469
G A RRA ++ IME A G ++ +SGKLRG R+ K G++ +G
Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAG 156
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 332 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNT 496
R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG ND++++
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDS 212
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 50.8 bits (116), Expect = 3e-05
Identities = 19/80 (23%), Positives = 46/80 (57%)
Frame = +3
Query: 6 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 185
K+RKF+ + V + + E++ +E G+ + ++ TP + I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 186 RELTSVVQKRFNIPEQSVEL 245
+++T ++K++ I +E+
Sbjct: 62 QQMTDTLEKKYGIETPQIEV 81
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 290 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 469
A+ + L G + R+A L +++GA+G + +SGK+ G+RA+ KF+ G + +SG
Sbjct: 95 AKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYSG 154
Query: 470 DP 475
+P
Sbjct: 155 EP 156
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +2
Query: 332 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 490
RR +LR +ME+GA G E+++SGKLR +RA+ K G + +GD DYV
Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMV-DYV 164
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +3
Query: 9 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 188
K F+ + K L+EFL + GY+G+E+ TP ++I A ++G G IR
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66
Query: 189 ELTSVVQKRFNIPEQSV 239
+L +++Q F + ++
Sbjct: 67 KLMTIMQTHFGLENVNI 83
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/78 (24%), Positives = 43/78 (55%)
Frame = +3
Query: 12 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 191
+K + + K + EFL L++ GY E+ TP+ + I+I A R ++G KG ++E
Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71
Query: 192 LTSVVQKRFNIPEQSVEL 245
+++++ + + +++
Sbjct: 72 ISNILTTKLGVENPQIDV 89
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 320 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 499
G+ RR + +R +ME+GA+G E+VVSGKL +RA+ K G + G + V A
Sbjct: 116 GVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRA 175
Query: 500 TRH 508
H
Sbjct: 176 VVH 178
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/86 (26%), Positives = 50/86 (58%)
Frame = -1
Query: 523 LA*EAMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTI 344
L+ + +S +V+ ++ ++RVDHE++ L G+ ++Q +N T T H ++++T+
Sbjct: 92 LSHQHVSDGNVNKVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLSTSSHGKSQHTV 151
Query: 343 ASTTYSETSDKLVS*RFGLGDSAKTT 266
+++ +T +L FGL S +T+
Sbjct: 152 GGSSHWQTVQQLGFQGFGLDSSGQTS 177
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +2
Query: 272 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 451
L A A L L G RRA + + IM++GARGC +++SGK+ G R + KF G
Sbjct: 94 LNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSGKISGPRHRVQKFQQG 153
Query: 452 LMIHSGDPCNDYVN 493
+ G+ +++
Sbjct: 154 HIKFCGETALQFMD 167
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = +3
Query: 12 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 191
R F+ V + + E+L RE G+ G+E TP +++ + A + V+G +G+ I E
Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68
Query: 192 LTSVVQKRFNIPEQSVEL 245
L ++ F + +E+
Sbjct: 69 LQYRLKSDFKLENPRLEV 86
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 320 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 499
G+ RRA LR + E+ +G EV++SGKL +R++ K+ G++I +G + V A
Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEA 163
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/81 (20%), Positives = 44/81 (54%)
Frame = +3
Query: 12 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 191
++ + D K + E+L L + Y ++ T + + I+I+A + ++G KG++++
Sbjct: 3 KRIIDDNKKKWMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKA 62
Query: 192 LTSVVQKRFNIPEQSVELYAE 254
L +++ +FN+ +++ E
Sbjct: 63 LADILKSKFNLDNVVIDVIQE 83
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 41.5 bits (93), Expect = 0.018
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 326 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 469
A RR L IM +GA G E+V++G+L GQR K+ +F G + +G
Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 155
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 38.3 bits (85), Expect = 0.17
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 326 AVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG 451
A RRA + +MESGARG +V++SG+L G ++A++ K ++G
Sbjct: 130 AFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEG 172
>UniRef50_A6RU12 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 4066
Score = 37.9 bits (84), Expect = 0.22
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +3
Query: 489 STLLPDIASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRA 650
++L PD+A+QAR R +GQ+ A P R P RP PG+ ++G + PRA
Sbjct: 3062 ASLPPDLAAQARQLR-RGQSDHAGHPGRA--PVGVIRRPAPGEESRGAPQQPRA 3112
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 37.5 bits (83), Expect = 0.29
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 272 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 448
L A AE++ +L G +A RRA + M GA G ++ VSG+L G + A+S F +
Sbjct: 110 LDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKE 169
Query: 449 G 451
G
Sbjct: 170 G 170
>UniRef50_Q980D5 Cluster: Putative uncharacterized protein; n=1;
Sulfolobus solfataricus|Rep: Putative uncharacterized
protein - Sulfolobus solfataricus
Length = 496
Score = 36.3 bits (80), Expect = 0.67
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = -1
Query: 424 TLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSDKLVS*RFGLGDSAKTTSSHLSAY 245
T TT + TTT T T ++ STT S +S S + +T+S S
Sbjct: 394 TTTTTSSTTTTSTTTSTTSTTSTSSSTTSTTTSSSSTTTTSSSITSSSTTSSTTSSTSTT 453
Query: 244 NSTDCSGMLNRFCTTEVSSRILRPFS-PSTLCVLVAIIMISER 119
T S T+ VS+ ++ + + V+VA++++ R
Sbjct: 454 TPTSTSSSTTSVTTSGVSTSVIIGIAIVVIIIVIVAVVLLRRR 496
>UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC
precursor - Enterococcus faecalis (Streptococcus
faecalis)
Length = 545
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 18 FVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIII 137
FVGDG F+ + EFL +L E+ G++V +TP+ + + +
Sbjct: 397 FVGDGEFEKKAGEFLQGQL-EENLEGLKVNITPVPANVFM 435
>UniRef50_A0MNG0 Cluster: Putative uncharacterized protein; n=1;
Thermus phage phiYS40|Rep: Putative uncharacterized
protein - Thermus phage phiYS40
Length = 1014
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +3
Query: 21 VGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTS 200
+ + +FK+E FL+R L+E Y+ ++ RS I R L +K + E+
Sbjct: 224 ISERIFKSEREIFLSRTLSEF-YNESLNAISIARSNFIAQLNRVNESL-QKAQSPEEVAR 281
Query: 201 VVQKRFNIPEQSVELYAE 254
+ ++RFN + +LYAE
Sbjct: 282 LQEERFNYLKSLTQLYAE 299
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 250 LKGGYSWSLRYRPGRISKIQAYRRSRCTSCLLWCSPFHH 366
L GG PGR +A RRSRC+ C W HH
Sbjct: 228 LGGGRHCDRFTAPGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 34.7 bits (76), Expect = 2.0
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 ERTQNP*ADFRSTEAIQHSRAICRIVC*KVATRGLCAIAQAESLRYKLIGGLAVRRACYG 349
ER ++ + T QH R IV ++ L A + + L +A RRA G
Sbjct: 86 ERLRSELSKIVDTYKGQHKRVNINIV--EIRKPDLNAHLVGQQIAADLERRVAFRRAMRG 143
Query: 350 VLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG 451
++ + +GA+G +VSG+L G A+ ++ +G
Sbjct: 144 AIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEG 178
>UniRef50_Q6ABZ1 Cluster: Serine/threonine kinase; n=1; Leifsonia
xyli subsp. xyli|Rep: Serine/threonine kinase -
Leifsonia xyli subsp. xyli
Length = 974
Score = 34.3 bits (75), Expect = 2.7
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 537 QGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPR 647
+G A G A + PE R H GD A G RAPR
Sbjct: 830 RGARDAAAGAAERHGPEWGPARDHGGDAAAGAVRAPR 866
>UniRef50_A2Y1D8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 137
Score = 34.3 bits (75), Expect = 2.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 292 GLGDSAKTTSSHLSAYNSTDCSGMLNRFCTTEVSS 188
GLG S T++HL A +S+ C G L R C+ V +
Sbjct: 37 GLGYSQLLTTAHLGAISSSSCGGRLGRQCSAAVGA 71
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 33.9 bits (74), Expect = 3.6
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 272 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 448
L AI AE + KL R A +R M+SGA+G + VSG+L G A+S + +
Sbjct: 115 LNAIILAEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSE 174
Query: 449 GLM 457
G M
Sbjct: 175 GEM 177
>UniRef50_UPI00005A065A Cluster: PREDICTED: similar to
interferon-induced protein with tetratricopeptide
repeats 1-like; n=4; Eutheria|Rep: PREDICTED: similar to
interferon-induced protein with tetratricopeptide
repeats 1-like - Canis familiaris
Length = 464
Score = 33.5 bits (73), Expect = 4.7
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +1
Query: 208 RSDSTFQSNL*NCMLKGGYSWSLRYRPGRISKIQAYRRSRCTSCLLWCSPFHHGIWCP 381
+ + QS++ + + G Y+W L Y GR+++ QAY +C+ + +P + + CP
Sbjct: 73 QQEHDIQSDVRSLVTWGNYAW-LYYHMGRLAEAQAYLDKVENTCMKFAAPSCYRMECP 129
>UniRef50_A7EZE6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 4172
Score = 33.5 bits (73), Expect = 4.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 489 STLLPDIASQARSTRNQGQNHVAVGPARQER-PEEATTRPHPGDRAQGRARAPRA 650
++L PD+A+QAR R +H P R P RP PG+ +G + PRA
Sbjct: 3172 ASLPPDLAAQARQLRRGQPDH----PGHSGRAPVGVIRRPAPGEEIRGAPQQPRA 3222
>UniRef50_UPI0000EBDEE2 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 180
Score = 33.1 bits (72), Expect = 6.2
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 555 AVGP-ARQERPEEATTRPHPGDRAQGRARAPRADQRSA 665
AV P AR+ A T P PG RA GR RAP A + SA
Sbjct: 78 AVSPGARKPHFGAAATHPAPGGRAGGRGRAPGACRGSA 115
>UniRef50_Q287X1 Cluster: Large protein; n=1; Beilong virus|Rep: Large
protein - Beilong virus
Length = 2172
Score = 33.1 bits (72), Expect = 6.2
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -1
Query: 424 TLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSDKLVS*RFGLGDSAKTTSSHLSAY 245
+L +L Y ++ + + DETE + S + KL+ + G + S +L AY
Sbjct: 1988 SLVNELKLYGDYLQSTLQSLDETEKLLMSYGFQINGPKLI--KQVTGHDVGSGSHNLKAY 2045
Query: 244 NSTDCSGMLNRFCTTE-VSSRILRPF 170
++ + ++N +C TE +S L P+
Sbjct: 2046 INSSVNNIIN-YCDTERTTSHFLEPY 2070
>UniRef50_A3ZPF5 Cluster: DNA polymerase III gamma and tau subunits;
n=1; Blastopirellula marina DSM 3645|Rep: DNA polymerase
III gamma and tau subunits - Blastopirellula marina DSM
3645
Length = 618
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 489 STLLPDIASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRAD 653
ST+ D+A++ +R + + GP RQ P E T+ D G + PR +
Sbjct: 425 STVQTDVAAERTESRVNSSDPASSGPVRQASPSEVTSYVEEPDPELGLSEPPRTN 479
>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
carota|Rep: Glycine-rich protein - Daucus carota
(Carrot)
Length = 111
Score = 33.1 bits (72), Expect = 6.2
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 346 WCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRW 450
W P G WC W C IW S C+ RW
Sbjct: 32 WWIPPRRGRWCWWRCRCWIWSRLRSWCRSRRRIRW 66
>UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1;
n=9; Endopterygota|Rep: Drosophila dodeca-satellite
protein 1 - Drosophila melanogaster (Fruit fly)
Length = 1301
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 111 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVE 242
T ++ + + +LG+ G+R+RE+ V R NIP QS E
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE 210
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 32.7 bits (71), Expect = 8.2
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 290 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIH 463
AE + +L ++ RRA + M GA G +++ SG+L G + A+S ++ +G + +H
Sbjct: 116 AEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLH 175
Query: 464 SGDPCNDY 487
+ DY
Sbjct: 176 TFRADIDY 183
>UniRef50_A4J9V1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia vietnamiensis G4|Rep: Putative
uncharacterized protein - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 106
Score = 32.7 bits (71), Expect = 8.2
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 522 RSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRADQRSAL 668
R TRN ++ GP R +E T P D A AR PRA +R+A+
Sbjct: 44 RFTRNPIRDGHISGPYCSARADEVTQNLPPDDAATKVARQPRASERNAV 92
>UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin H
- Ostreococcus tauri
Length = 322
Score = 32.7 bits (71), Expect = 8.2
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 314 IGGLAVRRACYGVLR----FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 460
+ GL R CYG R F+M+ GC+ S +L R K++ VD LM+
Sbjct: 146 LSGLKFRLVCYGATRPLDGFLMDVEDGGCKGATSKQLIECRKKALDIVDRLML 198
>UniRef50_Q2HB43 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 2225
Score = 32.7 bits (71), Expect = 8.2
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +3
Query: 492 TLLPDIASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARA 641
T L + S+ S N G +H GP Q E TT PH AQ R A
Sbjct: 1002 TFLASVPSKPPSANNTGLSHEKTGPNVQLGAESGTTEPHAAS-AQNRDAA 1050
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 341 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 439
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,106,617
Number of Sequences: 1657284
Number of extensions: 15033267
Number of successful extensions: 51910
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 48705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51759
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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