Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0526.Seq
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 151 6e-37
05_02_0069 - 6324082-6324495 34 0.089
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 31 1.1
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 30 1.9
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 30 1.9
02_05_0237 + 27095817-27097433 30 1.9
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414... 29 2.5
03_02_0750 + 10909130-10909616,10912257-10912916,10913139-109135... 29 2.5
01_05_0762 + 24990915-24990970,24991076-24991592,24991676-249917... 29 2.5
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 29 3.3
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 29 4.4
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 28 5.9
03_05_0400 - 23815408-23815589,23815706-23816020,23816203-238162... 28 5.9
10_01_0017 - 218188-218261,219262-219379,220348-220932,220996-22... 28 7.7
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 7.7
08_01_0346 - 3063440-3064189 28 7.7
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 28 7.7
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 28 7.7
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 151 bits (365), Expect = 6e-37
Identities = 74/85 (87%), Positives = 78/85 (91%)
Frame = +3
Query: 3 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 182
SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGRR
Sbjct: 8 SKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 67
Query: 183 IRELTSVVQKRFNIPEQSVELYAER 257
IRELTSVVQKRFN PE VELYAE+
Sbjct: 68 IRELTSVVQKRFNFPENGVELYAEK 92
Score = 145 bits (351), Expect = 3e-35
Identities = 68/85 (80%), Positives = 75/85 (88%)
Frame = +2
Query: 254 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 433
KV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRF+MESGA+GCEV+VSGKLR QRAKS
Sbjct: 92 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKS 151
Query: 434 MKFVDGLMIHSGDPCNDYVNTATRH 508
MKF DG MI SG P N Y+++A RH
Sbjct: 152 MKFKDGYMISSGYPVNLYIDSAVRH 176
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +1
Query: 508 LLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP-TSEV 663
+LLRQGVLGIKVKIML WD +GK GP P PD + + PKDE +P T+E+
Sbjct: 177 VLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEI 229
>05_02_0069 - 6324082-6324495
Length = 137
Score = 34.3 bits (75), Expect = 0.089
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 292 GLGDSAKTTSSHLSAYNSTDCSGMLNRFCTTEVSS 188
GLG S T++HL A +S+ C G L R C+ V +
Sbjct: 37 GLGYSQLLTTAHLGAISSSSCGGRLGRQCSAAVGA 71
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 573 QERPEEATTRPHPGDRAQGRARAPR 647
Q R + +T RP PG R++GR+R PR
Sbjct: 194 QLRSDYSTHRPPPGGRSRGRSRHPR 218
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 510 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRADQRS 662
A + S R G++ + P R+E + T RP PG + R+ A A+ S
Sbjct: 455 AERTMSLRGGGESAGSDSPCRREEAKSRTPRPQPGSAGE-RSAAASAEMSS 504
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 510 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRADQRSA 665
A + R+TRN G A + RP + T + + G A AP + +A
Sbjct: 1161 AEERRATRNAGGGAAPNKAAPKRRPRKTATNTQAAESSDGNAAAPAVPKPAA 1212
>02_05_0237 + 27095817-27097433
Length = 538
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 635 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPS 528
G+ L +V R GCG+FG + W G + L+PS
Sbjct: 152 GAHLPAVIRALVGCGWFG--IESWIGGRAVFLLLPS 185
>05_04_0322 +
20239793-20240127,20240176-20240728,20241317-20241425,
20244456-20244723,20244943-20245197,20245594-20246539
Length = 821
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 256 GGYSWSLRYRPG-RISKIQAYRRSRCTSCLLWC 351
G SWS RY+ ISK Y RC C++ C
Sbjct: 665 GALSWSRRYQIAIGISKGLPYLHERCRDCIIHC 697
>03_02_0750 +
10909130-10909616,10912257-10912916,10913139-10913544,
10914376-10914757,10914918-10915679,10916106-10916165,
10916695-10917105
Length = 1055
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +2
Query: 332 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGL--MIHSGDPCNDYVNTATR 505
R G++ ++ES VV+G+ KS+ V L ++H G ND V T +
Sbjct: 493 RLVAAGLVSRLVESDDDWETAVVTGRSCPDALKSLLSVAPLNDILHEGSAANDAVETMIK 552
Query: 506 HCFSGKEY*ESRSKSCCRGTSKA-RTARRSH 595
S KE +++S S G R R +H
Sbjct: 553 ILNSPKEETQAKSASALAGLFHCRRDLRETH 583
>01_05_0762 +
24990915-24990970,24991076-24991592,24991676-24991753,
24993678-24993743,24994819-24994943,24995414-24995612,
24995909-24996137,24996259-24996425,24996526-24996735,
24997245-24997355,24997436-24997612,24997826-24998284,
24998676-24998966
Length = 894
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = -1
Query: 364 DETENTIASTTYSETSDKLVS*RFGLGDSAKTTS--SHLSAYNS-TDCSG--MLNRFCTT 200
+ TENTI++ Y E+ + L+ D+A TS S S YN+ +D SG +L+ +
Sbjct: 673 ETTENTISAQRYQESDNDLLLSTSDKEDNATATSNGSSASTYNAPSDLSGPSLLSSQIPS 732
Query: 199 EVSSRILRPFSPS 161
E S ++ P +P+
Sbjct: 733 ETS--LINPGAPT 743
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -3
Query: 440 TSLIWHVDHAACQIQQLHNHGHQIP**NGEHHSKH 336
T L H AA Q H HGH G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 520 QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 663
Q VL I+ K ++ + P P P +EP+ EP P++ S V
Sbjct: 283 QAVLAIEYKRKPEDEESSSSAPLPPPPVSTSESEPEPEPEPVKEVSPV 330
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = -1
Query: 508 MSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTY 329
+ GS +++ V R D +++Y+ G ++ +NN +++G HD N I
Sbjct: 746 IDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGNVIGQGDQ 805
Query: 328 SETSDKLVS 302
++ +S
Sbjct: 806 DSEKNRYLS 814
>03_05_0400 -
23815408-23815589,23815706-23816020,23816203-23816277,
23816377-23816530
Length = 241
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 670 GSALRWSARGARARPWALSPGCGLVVASSG 581
GS+ R + GARA A P CG +V +G
Sbjct: 17 GSSARMAGAGARAEEAACEPPCGGLVVGAG 46
>10_01_0017 -
218188-218261,219262-219379,220348-220932,220996-221163,
221331-221333
Length = 315
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 501 PDIASQARSTRNQGQNHVAVGPARQERPE-EATTRPHPGDRAQGRAR 638
PD+ + R + Q N+V V P+R+++ + + R GD+ R R
Sbjct: 248 PDMKEEERKMKKQTTNNVIVFPSRKKKQKRKEDGRRFSGDQTAARVR 294
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 483 ITSTLLPDIASQARSTRNQGQNHVAVGPARQERPEEATTRPH 608
+ T LP + AR ++Q + + + P +RP ++R H
Sbjct: 798 VKGTTLPVVKINARVVKDQSSSELRIKPKVADRPPSRSSRSH 839
>08_01_0346 - 3063440-3064189
Length = 249
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 290 AESLRYKLIGGLAVRRACYGVLR 358
A S L+GG A ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 620 SVTRMWSGCGFFGPFLPCWSH 558
S T M S CGF G CW+H
Sbjct: 211 SSTGMQSNCGFEGQVNACWTH 231
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 583 PKKPQPDHILVTEPKDEPVPLEPTS 657
P+ +PD +LV P P PL P +
Sbjct: 129 PRADEPDVVLVLPPSQRPPPLSPAA 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,718,500
Number of Sequences: 37544
Number of extensions: 438688
Number of successful extensions: 1475
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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