Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0525.Seq
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 84 1e-17
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 53 4e-08
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 46 5e-06
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 44 2e-05
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 31 0.14
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 29 0.43
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 29 0.76
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 29 0.76
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 1.8
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 1.8
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 27 2.3
SPAC23H4.10c |thi4||thiamine-phosphate dipyrophosphorylase/hydro... 27 3.1
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 7.1
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 25 7.1
SPAC17G8.11c |||mannosyltransferase complex subunit |Schizosacch... 25 9.3
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 25 9.3
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 25 9.3
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 9.3
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 84.2 bits (199), Expect = 1e-17
Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +3
Query: 267 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISR 446
RCY C GH AREC + CYNCN+TGH A C E +E +TCY C +GH+ R
Sbjct: 18 RCYNCGENGHQARECTKGS---ICYNCNQTGHKASECTEPQQE---KTCYACGTAGHLVR 71
Query: 447 NCPDGTK-----TCYVXGKPGHISRDATRRG 524
+CP CY G+ GHI+RD G
Sbjct: 72 DCPSSPNPRQGAECYKCGRVGHIARDCRTNG 102
Score = 79.0 bits (186), Expect = 5e-16
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Frame = +3
Query: 270 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 449
CY CN TGH A EC + E +CY C GH+ R+CP CY C + GHI+R+
Sbjct: 38 CYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARD 97
Query: 450 C-PDGTKT------------CYVXGKPGHISRDAT 515
C +G ++ CY G GH +RD T
Sbjct: 98 CRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCT 132
Score = 76.6 bits (180), Expect = 3e-15
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Frame = +3
Query: 240 CEGLQEEADRCYRCNGTGHIARECAQSPDE---PSCYNCNKTGHIARNCPEGGRES---- 398
C Q+E CY C GH+ R+C SP+ CY C + GHIAR+C G++S
Sbjct: 51 CTEPQQEKT-CYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRF 109
Query: 399 ----ATQTCYNCNKSGHISRNCPDGTKTCYVXGKPGHIS 503
+ CY C GH +R+C G K CY GK GH S
Sbjct: 110 GGHRSNMNCYACGSYGHQARDCTMGVK-CYSCGKIGHRS 147
Score = 66.5 bits (155), Expect = 3e-12
Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +3
Query: 330 PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC--PDGTKTCYVXGKPGHIS 503
P CYNC + GH AR C +G CYNCN++GH + C P KTCY G GH+
Sbjct: 17 PRCYNCGENGHQARECTKG------SICYNCNQTGHKASECTEPQQEKTCYACGTAGHLV 70
Query: 504 RD 509
RD
Sbjct: 71 RD 72
Score = 58.8 bits (136), Expect = 6e-10
Identities = 26/61 (42%), Positives = 32/61 (52%)
Frame = +3
Query: 270 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 449
CY C GH AR+C CY+C K GH + C + S Q CY CN+ GHI+ N
Sbjct: 118 CYACGSYGHQARDCTMGV---KCYSCGKIGHRSFECQQA---SDGQLCYKCNQPGHIAVN 171
Query: 450 C 452
C
Sbjct: 172 C 172
Score = 53.2 bits (122), Expect = 3e-08
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 85 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDS-GFNRQREKCFKCNRTGHFARDC 252
S P + CYKC R GH AR+C G S G +R C+ C GH ARDC
Sbjct: 75 SSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDC 131
Score = 52.4 bits (120), Expect = 5e-08
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 15/64 (23%)
Frame = +1
Query: 109 SVCYKCNRTGHFARECTQ------------GGVVSRD---SGFNRQREKCFKCNRTGHFA 243
S+CY CN+TGH A ECT+ G + RD S RQ +C+KC R GH A
Sbjct: 36 SICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIA 95
Query: 244 RDCK 255
RDC+
Sbjct: 96 RDCR 99
Score = 50.8 bits (116), Expect = 2e-07
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 267 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 377
+CY C GH + EC Q+ D CY CN+ GHIA NC
Sbjct: 136 KCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNC 172
Score = 44.8 bits (101), Expect = 1e-05
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Frame = +1
Query: 115 CYKCNRTGHFARECTQGGVV--SRDSGFN-------RQREKCFKCNRTGHFARDC 252
CY C GH ARECT+G + +G +Q + C+ C GH RDC
Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDC 73
Score = 40.3 bits (90), Expect = 2e-04
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Frame = +1
Query: 103 SSSVCYKCNRTGHFARECTQG------GVVSRDSGFNRQR----EKCFKCNRTGHFARDC 252
S+ CY C GH AR+CT G G + S F Q+ + C+KCN+ GH A +C
Sbjct: 114 SNMNCYACGSYGHQARDCTMGVKCYSCGKIGHRS-FECQQASDGQLCYKCNQPGHIAVNC 172
Score = 31.9 bits (69), Expect = 0.081
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 97 AMSSSVCYKCNRTGHFARECT 159
A +CYKCN+ GH A CT
Sbjct: 153 ASDGQLCYKCNQPGHIAVNCT 173
Score = 27.9 bits (59), Expect = 1.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 196 RQREKCFKCNRTGHFARDCKK 258
R +C+ C GH AR+C K
Sbjct: 14 RPGPRCYNCGENGHQARECTK 34
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 228 HRTLCEGLQEEADRCYRCNGTGHIAREC 311
HR+ + CY+CN GHIA C
Sbjct: 145 HRSFECQQASDGQLCYKCNQPGHIAVNC 172
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 52.8 bits (121), Expect = 4e-08
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 252 QEEADR-CYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRESATQTCYNCN 425
Q D+ C+ C GHI ++C ++ D S C+ C H C + G + C+ C+
Sbjct: 72 QRNRDKFCFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAK-CFICH 130
Query: 426 KSGHISRNCPDGTKTCYVXG 485
++GH+S C K Y G
Sbjct: 131 ENGHLSGQCEQNPKGLYPKG 150
Score = 39.1 bits (87), Expect = 5e-04
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 303 RECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC----PDGTKT 470
R Q + C+ C + GHI ++CPE + C+ C H C P
Sbjct: 68 RRINQRNRDKFCFACRQQGHIVQDCPEA--KDNVSICFRCGSKEHSLNACSKKGPLKFAK 125
Query: 471 CYVXGKPGHIS 503
C++ + GH+S
Sbjct: 126 CFICHENGHLS 136
Score = 33.9 bits (74), Expect = 0.020
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +3
Query: 267 RCYRCNGTGHIARECAQSPD--EPS---CYNCNKTGHIARNCPEGGRESAT 404
+C+ C+ GH++ +C Q+P P C C+ H+A++C + ++ +
Sbjct: 125 KCFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQVNKDDVS 175
Score = 31.1 bits (67), Expect = 0.14
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 109 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKK 258
S+C++C H C++ G + + KCF C+ GH + C++
Sbjct: 100 SICFRCGSKEHSLNACSKKGPL--------KFAKCFICHENGHLSGQCEQ 141
Score = 29.9 bits (64), Expect = 0.33
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +1
Query: 85 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 252
SK + + C+ C+ GH + +C Q G + C C+ H A+DC
Sbjct: 116 SKKGPLKFAKCFICHENGHLSGQCEQ-----NPKGLYPKGGCCKFCSSVHHLAKDC 166
Score = 27.9 bits (59), Expect = 1.3
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 196 RQREK-CFKCNRTGHFARDC 252
R R+K CF C + GH +DC
Sbjct: 73 RNRDKFCFACRQQGHIVQDC 92
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 115 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKKR 261
C+ C + GH ++C + ++D+ CF+C H C K+
Sbjct: 79 CFACRQQGHIVQDCPE----AKDN-----VSICFRCGSKEHSLNACSKK 118
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 46.0 bits (104), Expect = 5e-06
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 16/78 (20%)
Frame = +3
Query: 270 CYRCNGTGHIAREC----------------AQSPDEPSCYNCNKTGHIARNCPEGGRESA 401
C+ C G GHI+++C + P C NC GHIA C E R+
Sbjct: 89 CHNCKGNGHISKDCPHVLCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSE-PRKRG 147
Query: 402 TQTCYNCNKSGHISRNCP 455
+ C C+ H S CP
Sbjct: 148 PRVCRTCHTDTHTSSTCP 165
Score = 39.5 bits (88), Expect = 4e-04
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 336 CYNCNKTGHIARNCPEGGRESATQTCYNCNK-SGHISRNCPDGTKTCYVXGKPGHIS 503
C+NC GHI+++CP C C HIS CP TK C G GHI+
Sbjct: 89 CHNCKGNGHISKDCPH-------VLCTTCGAIDDHISVRCP-WTKKCMNCGLLGHIA 137
Score = 33.1 bits (72), Expect = 0.035
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Frame = +1
Query: 106 SSVCYKCNRTGHFAREC------TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKK 258
S VC+ C GH +++C T G + S +KC C GH A C +
Sbjct: 86 SIVCHNCKGNGHISKDCPHVLCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSE 142
Score = 32.3 bits (70), Expect = 0.062
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 384 GGRESATQTCYNCNKSGHISRNCP 455
G S + C+NC +GHIS++CP
Sbjct: 80 GSDPSESIVCHNCKGNGHISKDCP 103
Score = 31.9 bits (69), Expect = 0.081
Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Frame = +3
Query: 267 RCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHI 440
+C C GHIA C++ C C+ H + CP R Y K +
Sbjct: 126 KCMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTCPLIWR-------YYVEKEHPV 178
Query: 441 SRNCPDGTKTCYVXGKPGHISRDATRRGTSRSN 539
+ + K CY H D T SRSN
Sbjct: 179 RIDVSEVRKFCYNCASDEHFGDDCTL--PSRSN 209
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 44.0 bits (99), Expect = 2e-05
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 336 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 455
C NC GH +CPE + C +C GHI+R+CP
Sbjct: 311 CQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCP 350
Score = 33.5 bits (73), Expect = 0.027
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Frame = +3
Query: 390 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVXGKPGHISRDATRR 521
R+ Q C NC GH +CP+ C G GHI+RD R
Sbjct: 304 RDDENQVCQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCPVR 352
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = +1
Query: 106 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKKR 261
+ VC C GH +C + ++ C C GH ARDC R
Sbjct: 308 NQVCQNCGNVGHRRFDCPER--INHTMNI-----VCRHCGSIGHIARDCPVR 352
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 270 CYRCNGTGHIARECAQSPDEP 332
C C GHIAR+C +P
Sbjct: 336 CRHCGSIGHIARDCPVRDQQP 356
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 31.1 bits (67), Expect = 0.14
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -1
Query: 486 CRTRSTSWCRRDSCGRCGRTCCSYSRSASQTLAPPR---DSSVRCGPSCCSCNTTARPGS 316
CRT T R+ C CG C ++ +S+TL+ P + VR SC S T +
Sbjct: 179 CRTPFTFTNRKHHCRNCGGVFC--NQCSSKTLSLPHLGINQPVRVCDSCYSLRTKPKGSK 236
Query: 315 VRTR 304
R R
Sbjct: 237 SRAR 240
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 29.5 bits (63), Expect = 0.43
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 387 GRESATQTCYNCNKSGHISRNCPDGTKTCYVXGKP 491
GR+ T+ C NC + GH+ N K C + G+P
Sbjct: 939 GRKPTTRKCSNCGQVGHMKTN-----KICPLFGRP 968
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +3
Query: 315 QSPDEPSCYNCNKTGHIARN--CPEGGR 392
+ P C NC + GH+ N CP GR
Sbjct: 940 RKPTTRKCSNCGQVGHMKTNKICPLFGR 967
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 28.7 bits (61), Expect = 0.76
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +3
Query: 372 NCPEGGRESATQTCYN----CNKSGHISRNCP 455
+CP+G E T C+N C +G+IS P
Sbjct: 66 DCPDGSDEPGTSACHNGKFFCKNTGYISSYIP 97
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 28.7 bits (61), Expect = 0.76
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +1
Query: 91 PIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFAR 246
P A +V K N GH E G V +S + K + +R G F+R
Sbjct: 384 PKAAPKAVSQKTNVDGHRNHEAKHGNTVQNESKSQKSSNKEGRSSRGGFFSR 435
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 275 VATVSLFLQSLAKCPVRLHLKHFSRCRLKPES 180
+ + + L +C L+ KH C LKPE+
Sbjct: 799 IVVIKSITRQLIQCLTLLNEKHVIHCDLKPEN 830
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 109 SVCYKCNRTGHFAREC 156
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 27.1 bits (57), Expect = 2.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 211 CFKCNRTGHFARDCKKRL 264
C+KC + H R+CK R+
Sbjct: 1806 CYKCGKADHNLRECKLRI 1823
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 435 HISRNCPDGTKTCYVXGKPGHISRDATRR 521
H + CP TCY GK H R+ R
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLRECKLR 1822
Score = 25.0 bits (52), Expect = 9.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 408 TCYNCNKSGHISRNC 452
TCY C K+ H R C
Sbjct: 1805 TCYKCGKADHNLREC 1819
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 109 SVCYKCNRTGHFAREC 156
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 27.1 bits (57), Expect = 2.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 211 CFKCNRTGHFARDCKKRL 264
C+KC + H R+CK R+
Sbjct: 1806 CYKCGKADHNLRECKLRI 1823
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 435 HISRNCPDGTKTCYVXGKPGHISRDATRR 521
H + CP TCY GK H R+ R
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLRECKLR 1822
Score = 25.0 bits (52), Expect = 9.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 408 TCYNCNKSGHISRNC 452
TCY C K+ H R C
Sbjct: 1805 TCYKCGKADHNLREC 1819
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 411 CYNCNKSGHISRNCPDGTKTCYVXGKP 491
CY C + GH + CP Y GKP
Sbjct: 185 CYRCGQKGHWIQACPTNADPNY-DGKP 210
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = +3
Query: 303 RECAQSPDEPS-----CYNCNKTGHIARNCP 380
R A PD+P CY C + GH + CP
Sbjct: 169 RIAASVPDKPPPPGYICYRCGQKGHWIQACP 199
Score = 25.4 bits (53), Expect = 7.1
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 112 VCYKCNRTGHFAREC 156
+CY+C + GH+ + C
Sbjct: 184 ICYRCGQKGHWIQAC 198
>SPAC23H4.10c |thi4||thiamine-phosphate
dipyrophosphorylase/hydroxyethylthiazole kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 525 TSRSNLVSLTINYVYYDATHG 587
T+RS +++ +NY YYD G
Sbjct: 336 TARSKVINTLLNYAYYDIIKG 356
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 486 CRTRSTSWCRRDSCGRCGRTCCSY 415
C T T + R+ C CG+ C Y
Sbjct: 69 CETEFTLFRRKHHCRICGKIICKY 92
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 7.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 384 GGRESATQTCYNCNKSG 434
GG+E + ++C +CN SG
Sbjct: 144 GGKEGSVKSCASCNGSG 160
>SPAC17G8.11c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 621 IVCRAWRPLLIVRAWHH 571
I+ AWR L AWHH
Sbjct: 213 IIWSAWRKLPDAEAWHH 229
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 9.3
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 193 NRQREKCFKCNRTGHFARDCK 255
+RQ KC +C RT + +++C+
Sbjct: 492 SRQFAKCRRCRRTKYCSKECQ 512
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 420 SYSRSASQTLAPPRDSSVRCGPSCCSCN 337
+YS + T APP SS G SC +CN
Sbjct: 417 TYSPTTLSTNAPPSPSS---GRSCSNCN 441
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 409 VCVADSRPPSGQFRAMWP 356
V ++D RPP + RA WP
Sbjct: 302 VSISDYRPPKKRKRAAWP 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,377,673
Number of Sequences: 5004
Number of extensions: 45240
Number of successful extensions: 207
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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