Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0521.Seq
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_24326| Best HMM Match : DENN (HMM E-Value=0) 29 3.1
SB_5269| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_40568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_44342| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-05) 28 7.1
SB_32453| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_48146| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 28 9.4
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -3
Query: 112 SWIFARRTSAKAFAKGVFINQERKLEVRRRLDTALVL 2
SWI+ RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 4 SWIYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 40
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -3
Query: 106 IFARRTSAKAFAKGVFINQERKLEVRRRLDTALVL 2
++ RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 8 LYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 42
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = -3
Query: 103 FARRTSAKAFAKGVFINQERKLEVRRRLDTALVL 2
+ RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 7 YERRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 40
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = -3
Query: 103 FARRTSAKAFAKGVFINQERKLEVRRRLDTALVL 2
+ RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 7 YERRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 40
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = -3
Query: 103 FARRTSAKAFAKGVFINQERKLEVRRRLDTALVL 2
+ RRT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 7 YERRTTAKAFAKNVFINQERKLEDRRRSDTVLVL 40
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 94 RTSAKAFAKGVFINQERKLEVRRRLDTALVL 2
RT+AKAFAK VFINQERKLE RRR DT LVL
Sbjct: 29 RTTAKAFAKNVFINQERKLEDRRRSDTVLVL 59
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 94 RTSAKAFAKGVFINQERKLEVRRRLDT 14
RT+AKAFAK VFINQERKLE RRR DT
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 658 DVVAVSQAPSPESNPDSPLPVTTM 729
DVVAVSQAPSPESNP+SP PV TM
Sbjct: 105 DVVAVSQAPSPESNPNSPSPVVTM 128
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -2
Query: 119 VKFLDLRKTNFSESICQRCFHQSRTKV 39
VKFLDLRKTN+ ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -3
Query: 97 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 2
R+T+ ++ + FINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVL 40
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -2
Query: 119 VKFLDLRKTNFSESICQRCFHQSRTKV 39
VKFLDLRKTN+ ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -3
Query: 97 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 2
R+T+ ++ + FINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVL 40
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Frame = -3
Query: 97 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 2
R+T+ ++ AK VFINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESIAKNVFINQERKLEDRRRSDTVLVL 40
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 119 VKFLDLRKTNFSESICQRCFHQSRTKV 39
VKFLDLRKTN+ ESI + F K+
Sbjct: 2 VKFLDLRKTNYCESIAKNVFINQERKL 28
>SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +1
Query: 613 SPCREWVIARLLPSLDVV--AVSQAPSPESNPDSPLPVTTM 729
S R ++A +P + + AVSQAPSPESNP+SP PV TM
Sbjct: 32 SRARGRIVATRIPHMLLKGRAVSQAPSPESNPNSPSPVVTM 72
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Frame = -3
Query: 97 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVL 2
R+T+ ++ + VFINQERKLE RRR DT LVL
Sbjct: 8 RKTNYCESICQDVFINQERKLEDRRRSDTVLVL 40
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2
Query: 119 VKFLDLRKTNFSESICQRCFHQSRTKV 39
VKFLDLRKTN+ ESICQ F K+
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKL 28
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = -3
Query: 103 FARRTSAKAFAKGVFINQERKLEVRRRLDTALVL 2
F + ++ + FINQERKLE RRR DT LVL
Sbjct: 7 FRKTNYCESICQECFINQERKLEDRRRSDTVLVL 40
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 116 KFLDLRKTNFSESICQRCFHQSRTKV 39
+ L RKTN+ ESICQ CF K+
Sbjct: 3 EILGFRKTNYCESICQECFINQERKL 28
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 668 PFLRLPLRNRTLIPRYP 718
PFLRLPLRNRTLI R+P
Sbjct: 224 PFLRLPLRNRTLILRHP 240
>SB_24326| Best HMM Match : DENN (HMM E-Value=0)
Length = 1281
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -2
Query: 713 NGESGFDSGEGA*ETATTSKEGSRRAITHSRHGEVVTKNND 591
NGES DSG G E T R SRH V N+D
Sbjct: 1076 NGESDRDSGHGGSEIETVMMPSHRSHDDVSRHNPVSRANSD 1116
>SB_5269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 618 VPGVGNCAPAAFLGCGSRFSGSLSGI-EP*FP 710
VP + N AP AFL CG +GS I P FP
Sbjct: 171 VPTLYNGAPRAFLHCGGMITGSAGEITSPYFP 202
>SB_40568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 691 PEREPEKRLPHPRKAAGAQLPTPGT 617
P+ PE P RKAA + P PGT
Sbjct: 167 PQTNPEDSSPGNRKAANRETPPPGT 191
>SB_44342| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-05)
Length = 608
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -2
Query: 674 ETATTSKEGSRRAITHSRHGEVVTKNNDTGLLR 576
E A K+ S+RAI H R VT N +TG+LR
Sbjct: 369 EKAPEDKQRSKRAIPHMRR---VTTNFETGVLR 398
>SB_32453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 519 PSN--CSSLKYLKCTHSDYEAS*ESRIVIFRHYL 614
PSN CS L YL+C +R+++F H L
Sbjct: 523 PSNLRCSILSYLRCNKPPVTIRWRTRLIVFTHLL 556
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 181 KTNKIEPRSYSIIPCTKYSSSIFSPFEHSNLFKVKLSAHL 300
K + ++ Y+ + +S F FEH+N ++KL+ ++
Sbjct: 725 KNHSVDKHDYNNVTPLLFSQERFERFEHNNSLEIKLTVNI 764
>SB_48146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 810
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 112 NLTSNVAIRMHPVIPINHYLGVLKTNKIEPRSYSIIPC 225
N ++ + R+H IP ++YL + N + ++ PC
Sbjct: 637 NRSALIGKRLHSPIPADYYLNAICRNTVNMKTRGFYPC 674
>SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2496
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 470 SIRYWSWNYRGCWTRLALQLFLVKIFKVYS 559
S+R W + +R C + LA QLF V + + S
Sbjct: 1135 SLRLWGYKWRKCDSTLAKQLFSVLVQAILS 1164
>SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 441
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 649 PSLDVVAVSQAPSPESNPDSPLP 717
P+ DV+A Q P P S D PLP
Sbjct: 75 PAEDVMAAHQEPKPTSAIDQPLP 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,555,388
Number of Sequences: 59808
Number of extensions: 464374
Number of successful extensions: 1228
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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