Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0521.Seq
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U06469-1|AAA53215.1| 524|Homo sapiens HEAAC1 protein. 34 0.48
U08989-1|AAA68628.1| 524|Homo sapiens glutamate transporter pro... 34 0.64
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 34 0.64
AF074911-1|AAC27511.3| 524|Homo sapiens neuronal and epithelial... 34 0.64
U03506-1|AAA50430.1| 525|Homo sapiens excitatory amino acid tra... 33 1.1
AL162587-1|CAH71965.1| 524|Homo sapiens solute carrier family 1... 33 1.1
AL136231-6|CAI41264.1| 524|Homo sapiens solute carrier family 1... 33 1.1
AB008536-1|BAB83767.1| 524|Homo sapiens excitatory amino acid t... 33 1.1
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 33 1.5
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 33 1.5
BC033040-1|AAH33040.1| 524|Homo sapiens solute carrier family 1... 32 2.6
X80497-1|CAA56662.1| 1235|Homo sapiens phosphorylase kinase prot... 30 7.8
D38616-1|BAA07606.1| 1235|Homo sapiens phosphorylase kinase alph... 30 7.8
BC014036-1|AAH14036.1| 1235|Homo sapiens phosphorylase kinase, a... 30 7.8
AL732509-6|CAI41680.1| 1235|Homo sapiens phosphorylase kinase, a... 30 7.8
AL096700-4|CAB86408.2| 1235|Homo sapiens phosphorylase kinase, a... 30 7.8
AF044572-1|AAD32846.1| 1235|Homo sapiens phosphorylase kinase al... 30 7.8
>U06469-1|AAA53215.1| 524|Homo sapiens HEAAC1 protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.48
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = -2
Query: 254 GLKMLLEYFVHGIIEYDLGSILLVFRTP----R**LIGITGCI-RIATLEVKFLDLRKTN 90
GL+ +L YF +I LG +L+V P + I TG ++T++ LDL +
Sbjct: 91 GLRAVLYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDA-MLDLIRNM 149
Query: 89 FSESICQRCFHQSRTK 42
F E++ Q CF Q +TK
Sbjct: 150 FPENLVQACFQQYKTK 165
>U08989-1|AAA68628.1| 524|Homo sapiens glutamate transporter
protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.64
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = -2
Query: 254 GLKMLLEYFVHGIIEYDLGSILLVFRTP----R**LIGITGCI-RIATLEVKFLDLRKTN 90
GL++++ YF +I LG +L+V P + I TG ++T++ LDL +
Sbjct: 91 GLRVVVYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDA-MLDLIRNM 149
Query: 89 FSESICQRCFHQSRTK 42
F E++ Q CF Q +TK
Sbjct: 150 FPENLVQACFQQYKTK 165
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 580 KSPVSLFFVTTSPCREWV--IARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 738
++P + ++TT P E + + PS+ + + SPES P SPLPVT ++ +
Sbjct: 5614 RTPGDVSWMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668
>AF074911-1|AAC27511.3| 524|Homo sapiens neuronal and epithelial
glutamate transporter protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.64
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = -2
Query: 254 GLKMLLEYFVHGIIEYDLGSILLVFRTP----R**LIGITGCI-RIATLEVKFLDLRKTN 90
GL++++ YF +I LG +L+V P + I TG ++T++ LDL +
Sbjct: 91 GLRVVVYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDA-MLDLIRNM 149
Query: 89 FSESICQRCFHQSRTK 42
F E++ Q CF Q +TK
Sbjct: 150 FPENLVQACFQQYKTK 165
>U03506-1|AAA50430.1| 525|Homo sapiens excitatory amino acid
transporter3 protein.
Length = 525
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = -2
Query: 254 GLKMLLEYFVHGIIEYDLGSILLVFRTP----R**LIGITGCI-RIATLEVKFLDLRKTN 90
GL+ ++ YF +I LG +L+V P + I TG ++T++ LDL +
Sbjct: 92 GLRAVVYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDA-MLDLIRNM 150
Query: 89 FSESICQRCFHQSRTK 42
F E++ Q CF Q +TK
Sbjct: 151 FPENLVQACFQQYKTK 166
>AL162587-1|CAH71965.1| 524|Homo sapiens solute carrier family 1
(neuronal/epithelial highg) 1 protein.
Length = 524
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = -2
Query: 254 GLKMLLEYFVHGIIEYDLGSILLVFRTP----R**LIGITGCI-RIATLEVKFLDLRKTN 90
GL+ ++ YF +I LG +L+V P + I TG ++T++ LDL +
Sbjct: 91 GLRAVVYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDA-MLDLIRNM 149
Query: 89 FSESICQRCFHQSRTK 42
F E++ Q CF Q +TK
Sbjct: 150 FPENLVQACFQQYKTK 165
>AL136231-6|CAI41264.1| 524|Homo sapiens solute carrier family 1
(neuronal/epithelial highde 1 protein.
Length = 524
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = -2
Query: 254 GLKMLLEYFVHGIIEYDLGSILLVFRTP----R**LIGITGCI-RIATLEVKFLDLRKTN 90
GL+ ++ YF +I LG +L+V P + I TG ++T++ LDL +
Sbjct: 91 GLRAVVYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDA-MLDLIRNM 149
Query: 89 FSESICQRCFHQSRTK 42
F E++ Q CF Q +TK
Sbjct: 150 FPENLVQACFQQYKTK 165
>AB008536-1|BAB83767.1| 524|Homo sapiens excitatory amino acid
transporter-3 protein.
Length = 524
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = -2
Query: 254 GLKMLLEYFVHGIIEYDLGSILLVFRTP----R**LIGITGCI-RIATLEVKFLDLRKTN 90
GL+ ++ YF +I LG +L+V P + I TG ++T++ LDL +
Sbjct: 91 GLRAVVYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDA-MLDLIRNM 149
Query: 89 FSESICQRCFHQSRTK 42
F E++ Q CF Q +TK
Sbjct: 150 FPENLVQACFQQYKTK 165
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 691 PEREPEKRLPHPRKAAGAQLPTPGTG 614
PE EPE+ P PR GA P PG+G
Sbjct: 66 PEPEPEEEPPRPRAPPGAPGPGPGSG 91
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 691 PEREPEKRLPHPRKAAGAQLPTPGTG 614
PE EPE+ P PR GA P PG+G
Sbjct: 66 PEPEPEEEPPRPRAPPGAPGPGPGSG 91
>BC033040-1|AAH33040.1| 524|Homo sapiens solute carrier family 1
(neuronal/epithelial high affinity glutamate transporte
protein.
Length = 524
Score = 31.9 bits (69), Expect = 2.6
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = -2
Query: 254 GLKMLLEYFVHGIIEYDLGSILLVFRTP----R**LIGITGCI-RIATLEVKFLDLRKTN 90
G++ ++ YF +I LG +L+V P + I TG ++T++ LDL +
Sbjct: 91 GVRAVVYYFCTTLIAVILGIVLVVSIKPGVTQKVGEIARTGSTPEVSTVDA-MLDLIRNM 149
Query: 89 FSESICQRCFHQSRTK 42
F E++ Q CF Q +TK
Sbjct: 150 FPENLVQACFQQYKTK 165
>X80497-1|CAA56662.1| 1235|Homo sapiens phosphorylase kinase
protein.
Length = 1235
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>D38616-1|BAA07606.1| 1235|Homo sapiens phosphorylase kinase alpha
subunit protein.
Length = 1235
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>BC014036-1|AAH14036.1| 1235|Homo sapiens phosphorylase kinase,
alpha 2 (liver) protein.
Length = 1235
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>AL732509-6|CAI41680.1| 1235|Homo sapiens phosphorylase kinase,
alpha 2 (liver) protein.
Length = 1235
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>AL096700-4|CAB86408.2| 1235|Homo sapiens phosphorylase kinase,
alpha 2 (liver) protein.
Length = 1235
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
>AF044572-1|AAD32846.1| 1235|Homo sapiens phosphorylase kinase alpha
subunit protein.
Length = 1235
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
LN+ + R +LRK+V + A+ACTD +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,330,652
Number of Sequences: 237096
Number of extensions: 2173670
Number of successful extensions: 6062
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6055
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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