Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0520.Seq
(741 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57314-1|AAB49926.1| 624|Drosophila melanogaster LAMA protein. 51 2e-06
BT001475-1|AAN71230.1| 658|Drosophila melanogaster LD13253p pro... 51 2e-06
AE014296-945|AAN12118.2| 658|Drosophila melanogaster CG10645-PC... 51 2e-06
AE014296-944|AAF50787.3| 658|Drosophila melanogaster CG10645-PB... 51 2e-06
AE014296-943|AAG22333.2| 658|Drosophila melanogaster CG10645-PA... 51 2e-06
AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p pro... 33 0.41
AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family sp... 33 0.41
AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB... 33 0.41
AF495541-1|AAM18063.1| 540|Drosophila melanogaster prolyl 4-hyd... 29 5.0
AY094937-1|AAM11290.1| 394|Drosophila melanogaster RH54416p pro... 29 8.8
AE014298-3099|AAN09667.1| 388|Drosophila melanogaster CG32521-P... 29 8.8
AE014298-3098|AAF50844.2| 388|Drosophila melanogaster CG32521-P... 29 8.8
>U57314-1|AAB49926.1| 624|Drosophila melanogaster LAMA protein.
Length = 624
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 73 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYC 249
V + Y + + GWA +E+ T R D QAY+AG LEG LT I+ W N + C
Sbjct: 40 VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTISSSC 98
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 267 CALIEDYLDNNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 434
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 108 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 167
Query: 435 TVRDILWINMLGDLDDL 485
D L +N D+ DL
Sbjct: 168 PFSDFLLMNAAADIQDL 184
Score = 33.1 bits (72), Expect = 0.41
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 566 PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSS*PGL 724
P + L T SY SMLRIQK Y +Y +S +PG ++ + PG+
Sbjct: 229 PQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGI 282
>BT001475-1|AAN71230.1| 658|Drosophila melanogaster LD13253p
protein.
Length = 658
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 73 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYC 249
V + Y + + GWA +E+ T R D QAY+AG LEG LT I+ W N + C
Sbjct: 74 VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTISSSC 132
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 267 CALIEDYLDNNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 434
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 142 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 201
Query: 435 TVRDILWINMLGDLDDL 485
D L +N D+ DL
Sbjct: 202 PFSDFLLMNAAADIQDL 218
Score = 33.1 bits (72), Expect = 0.41
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 566 PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSS*PGL 724
P + L T SY SMLRIQK Y +Y +S +PG ++ + PG+
Sbjct: 263 PQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGI 316
>AE014296-945|AAN12118.2| 658|Drosophila melanogaster CG10645-PC,
isoform C protein.
Length = 658
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 73 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYC 249
V + Y + + GWA +E+ T R D QAY+AG LEG LT I+ W N + C
Sbjct: 74 VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTISSSC 132
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 267 CALIEDYLDNNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 434
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 142 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 201
Query: 435 TVRDILWINMLGDLDDL 485
D L +N D+ DL
Sbjct: 202 PFSDFLLMNAAADIQDL 218
Score = 33.1 bits (72), Expect = 0.41
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 566 PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSS*PGL 724
P + L T SY SMLRIQK Y +Y +S +PG ++ + PG+
Sbjct: 263 PQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGI 316
>AE014296-944|AAF50787.3| 658|Drosophila melanogaster CG10645-PB,
isoform B protein.
Length = 658
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 73 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYC 249
V + Y + + GWA +E+ T R D QAY+AG LEG LT I+ W N + C
Sbjct: 74 VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTISSSC 132
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 267 CALIEDYLDNNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 434
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 142 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 201
Query: 435 TVRDILWINMLGDLDDL 485
D L +N D+ DL
Sbjct: 202 PFSDFLLMNAAADIQDL 218
Score = 33.1 bits (72), Expect = 0.41
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 566 PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSS*PGL 724
P + L T SY SMLRIQK Y +Y +S +PG ++ + PG+
Sbjct: 263 PQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGI 316
>AE014296-943|AAG22333.2| 658|Drosophila melanogaster CG10645-PA,
isoform A protein.
Length = 658
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +1
Query: 73 VAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLKGYC 249
V + Y + + GWA +E+ T R D QAY+AG LEG LT I+ W N + C
Sbjct: 74 VGRICYKDSVYENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTWRNIYNQWSNTISSSC 132
Score = 46.4 bits (105), Expect = 4e-05
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 267 CALIEDYLDNNEDYIASMVQEHYEDPYWYQIKLYYIQLEGLAAGY----NDATKSMYEWL 434
C + D L N + ++ D YW+Q+ L+ QLEGL GY + A + E +
Sbjct: 142 CGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEI 201
Query: 435 TVRDILWINMLGDLDDL 485
D L +N D+ DL
Sbjct: 202 PFSDFLLMNAAADIQDL 218
Score = 33.1 bits (72), Expect = 0.41
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 566 PDLSDLYTAQVTWNSYQSMLRIQKMYVMNY-MTSPGSGVLIPGRKMSLSS*PGL 724
P + L T SY SMLRIQK Y +Y +S +PG ++ + PG+
Sbjct: 263 PQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGI 316
>AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p
protein.
Length = 195
Score = 33.1 bits (72), Expect = 0.41
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 55 DIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 192
++ D+Y+ + YT E + G+AF+ + RD+ D +A L+G
Sbjct: 48 EVGDIYIPRDRYTRE--SRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
>AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family
splicing factor SC35 protein.
Length = 195
Score = 33.1 bits (72), Expect = 0.41
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 55 DIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 192
++ D+Y+ + YT E + G+AF+ + RD+ D +A L+G
Sbjct: 48 EVGDIYIPRDRYTRE--SRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
>AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB,
isoform B protein.
Length = 195
Score = 33.1 bits (72), Expect = 0.41
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 55 DIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 192
++ D+Y+ + YT E + G+AF+ + RD+ D +A L+G
Sbjct: 48 EVGDIYIPRDRYTRE--SRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
>AF495541-1|AAM18063.1| 540|Drosophila melanogaster prolyl
4-hydroxylase alpha-relatedprotein PH4[alpha]SG1
protein.
Length = 540
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 614 QSMLRIQKMYVMNYMTSPGSGVLIPGRKMSLSS 712
+++LR+Q MY +N SGVL+PG K L++
Sbjct: 136 RALLRLQNMYQLN-TDHLASGVLLPGEKSPLAT 167
>AY094937-1|AAM11290.1| 394|Drosophila melanogaster RH54416p
protein.
Length = 394
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 597 TCAVYRSERSGSSFTSPEQCSPNIRPSGVS-SAWTARTPGRPSHP 466
TC S +S +SP +P+ PS VS +A+ P PS P
Sbjct: 62 TCKRRSGGGSSASNSSPNLAAPSANPSEVSHNAYAPNAPSAPSAP 106
>AE014298-3099|AAN09667.1| 388|Drosophila melanogaster CG32521-PB,
isoform B protein.
Length = 388
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 597 TCAVYRSERSGSSFTSPEQCSPNIRPSGVS-SAWTARTPGRPSHP 466
TC S +S +SP +P+ PS VS +A+ P PS P
Sbjct: 62 TCKRRSGGGSSASNSSPNLAAPSANPSEVSHNAYAPNAPSAPSAP 106
>AE014298-3098|AAF50844.2| 388|Drosophila melanogaster CG32521-PA,
isoform A protein.
Length = 388
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 597 TCAVYRSERSGSSFTSPEQCSPNIRPSGVS-SAWTARTPGRPSHP 466
TC S +S +SP +P+ PS VS +A+ P PS P
Sbjct: 62 TCKRRSGGGSSASNSSPNLAAPSANPSEVSHNAYAPNAPSAPSAP 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,222,769
Number of Sequences: 53049
Number of extensions: 663063
Number of successful extensions: 1735
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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