Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0519X.Seq
(436 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 161 4e-41
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 157 9e-40
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 134 6e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 118 3e-28
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 91 5e-20
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 54 9e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 51 9e-08
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 38 5e-04
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.18
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 25 3.8
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 5.0
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 25 5.0
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 6.7
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 25 6.7
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 24 8.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 161 bits (391), Expect = 4e-41
Identities = 72/89 (80%), Positives = 81/89 (91%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKH
Sbjct: 28 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKH 87
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFSPRK 268
WPF+V+S GKP ++V YKGE KTF+P +
Sbjct: 88 WPFKVISKDGKPVLQVEYKGETKTFTPEE 116
Score = 102 bits (245), Expect = 2e-23
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +1
Query: 259 PEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 435
PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIIN
Sbjct: 114 PEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIIN 172
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 157 bits (380), Expect = 9e-40
Identities = 70/89 (78%), Positives = 79/89 (88%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKH
Sbjct: 28 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKH 87
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFSPRK 268
WPF+V+ GKP I+V +KGE KTF+P +
Sbjct: 88 WPFKVIEKDGKPLIQVEFKGETKTFTPEE 116
Score = 99.5 bits (237), Expect = 2e-22
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1
Query: 259 PEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 435
PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIIN
Sbjct: 114 PEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIIN 172
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 134 bits (324), Expect = 6e-33
Identities = 58/88 (65%), Positives = 72/88 (81%)
Frame = +2
Query: 5 NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHW 184
NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KHW
Sbjct: 33 NDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHW 92
Query: 185 PFEVVSDGGKPKIKVAYKGEDKTFSPRK 268
PF+V+ + G P I+V Y GE K F+ ++
Sbjct: 93 PFKVIDNNGIPTIEVNYLGEKKQFTAQE 120
Score = 90.6 bits (215), Expect = 9e-20
Identities = 44/66 (66%), Positives = 54/66 (81%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLN 417
G ++ +E+S+MVLTKMKE +EA L + V+ AVITVPAYF+DSQR ATKDAG I+GLN
Sbjct: 111 GEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLN 170
Query: 418 VLRIIN 435
VLRIIN
Sbjct: 171 VLRIIN 176
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 118 bits (285), Expect = 3e-28
Identities = 52/89 (58%), Positives = 68/89 (76%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+ D+K
Sbjct: 61 ANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKS 120
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFSPRK 268
+PF +V+D +P ++V G+ K F+P +
Sbjct: 121 FPFHIVNDKNRPLVEVNVGGKKKKFTPEE 149
Score = 104 bits (249), Expect = 7e-24
Identities = 46/66 (69%), Positives = 60/66 (90%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLN 417
G ++ PEE+S+M+L+KMK+TAEAYLG+ V +AV+TVPAYFND+QRQATKDAGTI+GLN
Sbjct: 140 GKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLN 199
Query: 418 VLRIIN 435
V+RI+N
Sbjct: 200 VIRIVN 205
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 91.5 bits (217), Expect = 5e-20
Identities = 39/59 (66%), Positives = 50/59 (84%)
Frame = +1
Query: 259 PEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 435
P ++ +L+KM+ETA YLG+ V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++N
Sbjct: 160 PSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVN 218
Score = 81.0 bits (191), Expect = 7e-17
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMK 178
AN +G RTTPS VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K
Sbjct: 76 ANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIK 135
Query: 179 HWPFEVVSDGGKPKIKVAYKGEDKTFSP 262
P+++V + KT+SP
Sbjct: 136 EVPYKIVEHSNG---DAWLEARGKTYSP 160
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 54.0 bits (124), Expect = 9e-09
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKH 181
N+ NR+TPS V++ + R +G+AAK+ A N NT+ KRL GR ++D ++ +
Sbjct: 32 NEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNF 91
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFS 259
++ G KV Y E+ FS
Sbjct: 92 ISAKLTEVDGFVGAKVQYLNEETAFS 117
Score = 52.0 bits (119), Expect = 4e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +1
Query: 286 TKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 435
TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N
Sbjct: 127 TKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMN 176
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 50.8 bits (116), Expect = 9e-08
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +1
Query: 253 LFPEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRII 432
L E S L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I
Sbjct: 138 LTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLI 197
Query: 433 N 435
+
Sbjct: 198 H 198
Score = 41.9 bits (94), Expect = 4e-05
Identities = 22/91 (24%), Positives = 49/91 (53%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
AN++GNR PS +++ + G A+ Q+ N +N++ + + L+G+ ++ T+ H
Sbjct: 50 ANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNSVTNFRDLLGKSHDELTLH--HCH 107
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFSPRKSV 274
+ V+ G+ K+ + ED+ P++ +
Sbjct: 108 YSANPVNVEGQIGFKITVQ-EDEESDPKEKI 137
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 38.3 bits (85), Expect = 5e-04
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 247 QNLFPEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 426
+N EE+ +M + AE E + + V+TVP +FN+ QR +A I +VL
Sbjct: 133 ENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLA 192
Query: 427 IIN 435
+I+
Sbjct: 193 LID 195
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 20 RTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKHWP 187
R S VAF ER+ G A N P ++I + K L+ E VQ +P
Sbjct: 55 RKEQSAVAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 29.9 bits (64), Expect = 0.18
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 38 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 217
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 218 KIKVAYKGEDKTF 256
+K+ G + F
Sbjct: 185 -LKLMIDGTVRNF 196
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 3.8
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = +3
Query: 315 SWRNCAECSYHG---SRVLQ*LSKTS--HKRC 395
+WRNC SY G SR+L L++ HKRC
Sbjct: 394 NWRNCIFYSYAGESESRMLVDLNELDLVHKRC 425
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 5.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 241 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 119
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 25.0 bits (52), Expect = 5.0
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 262 EEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQA--TKDAG 399
EE++S + +K+ E E + ET+ V + P +SQ+Q+ TK G
Sbjct: 679 EEITSTINSKISEKQENNVAETILE-VTSSPKSSENSQKQSEITKKRG 725
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 211 ASITDNLERPVLHVGLHSS 155
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 24.6 bits (51), Expect = 6.7
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 350 FPRTSMTLKDKPQKMPVPS 406
+P +++ + DKP K PVP+
Sbjct: 338 YPGSNLVVVDKPYKCPVPN 356
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 24.2 bits (50), Expect = 8.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 306 GSFLHFRKHHGTDFLGEKVLSSPL 235
GS LH++ + LG+ LSSP+
Sbjct: 35 GSLLHYQISENPELLGKYDLSSPI 58
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,878,924
Number of Sequences: 5004
Number of extensions: 36648
Number of successful extensions: 110
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 156095170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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