Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0519X.Seq
(436 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 155 1e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 8e-38
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 150 6e-37
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 116 6e-27
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 85 3e-17
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 3e-10
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 60 8e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 4e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 36 0.011
SB_24060| Best HMM Match : GED (HMM E-Value=0.52) 31 0.41
SB_20011| Best HMM Match : GED (HMM E-Value=0.65) 30 0.95
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 1.3
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 1.3
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 1.7
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 1.7
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 28 2.9
SB_54876| Best HMM Match : EHN (HMM E-Value=3.8) 28 2.9
SB_47034| Best HMM Match : GED (HMM E-Value=0.52) 28 2.9
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 28 2.9
SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_19038| Best HMM Match : GED (HMM E-Value=0.52) 28 2.9
SB_46953| Best HMM Match : DUF1014 (HMM E-Value=0.83) 28 3.8
SB_39413| Best HMM Match : GED (HMM E-Value=0.81) 28 3.8
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 3.8
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 3.8
SB_51718| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 27 5.0
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_10449| Best HMM Match : Ribosomal_L22 (HMM E-Value=7.8) 27 6.7
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 27 6.7
SB_54912| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14) 27 8.8
SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39) 27 8.8
SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5) 27 8.8
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 155 bits (377), Expect = 1e-38
Identities = 68/86 (79%), Positives = 79/86 (91%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNRTTPSYV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK
Sbjct: 30 ANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKL 89
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFS 259
WPF+++SD KPKI+V YKGE KTF+
Sbjct: 90 WPFKIISDNNKPKIQVEYKGERKTFA 115
Score = 106 bits (255), Expect = 7e-24
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLN 417
G R+ EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLN
Sbjct: 109 GERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLN 168
Query: 418 VLRIIN 435
VLR+IN
Sbjct: 169 VLRVIN 174
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 153 bits (370), Expect = 8e-38
Identities = 68/85 (80%), Positives = 76/85 (89%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKH
Sbjct: 30 ANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKH 89
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTF 256
W FEVV++ G+PK+KV YKGE KTF
Sbjct: 90 WSFEVVNEAGRPKVKVEYKGETKTF 114
Score = 99.1 bits (236), Expect = 1e-21
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +1
Query: 265 EVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 435
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIIN
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIIN 267
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/54 (75%), Positives = 45/54 (83%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAG 399
G + F EE+SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 134 GETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 150 bits (363), Expect = 6e-37
Identities = 66/89 (74%), Positives = 76/89 (85%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM H
Sbjct: 30 ANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTH 89
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFSPRK 268
WPF V+ +G +PKI+V +KGE K+F P +
Sbjct: 90 WPFHVIREGERPKIQVEFKGEKKSFFPEE 118
Score = 111 bits (268), Expect = 2e-25
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLN 417
G +++ FPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLN
Sbjct: 109 GEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLN 168
Query: 418 VLRIIN 435
VLRIIN
Sbjct: 169 VLRIIN 174
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 116 bits (280), Expect = 6e-27
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMK 178
ANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K
Sbjct: 727 ANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLK 786
Query: 179 HWPFEVVSDGGKPKIKVAYKGEDKTFS 259
+PF+VV KP ++V K E KTF+
Sbjct: 787 FFPFKVVDKNKKPHVQVKVKDEIKTFA 813
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = +1
Query: 262 EEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 435
EE+S+MVLTKMKETAEAYLG+ V +AV+TVPAYFND+QRQATKDAG I+GL V+RIIN
Sbjct: 815 EEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIIN 872
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 84.6 bits (200), Expect = 3e-17
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLN 417
G +++ PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 8 GEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLD 67
Query: 418 VL 423
VL
Sbjct: 68 VL 69
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 61.3 bits (142), Expect = 3e-10
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 244 RQNLF-PEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNV 420
+Q +F PE+V +M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN
Sbjct: 167 KQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNC 226
Query: 421 LRIIN 435
LR++N
Sbjct: 227 LRLMN 231
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 98 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFSPRK 268
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + FSP +
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQ 175
Score = 35.5 bits (78), Expect = 0.019
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQ 88
AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 27 ANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 60.1 bits (139), Expect = 8e-10
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
+++ ++ PS VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F + K
Sbjct: 59 SDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKL 118
Query: 182 WPFEVVSD-GGKPKIKVAYKGEDKTFSPRK 268
+ F V +D G V KG +P +
Sbjct: 119 YQFRVTTDKRGNAGFLVGKKGNFTVITPEE 148
Score = 56.8 bits (131), Expect = 7e-09
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +1
Query: 259 PEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 435
PEE+ V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+IN
Sbjct: 146 PEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVIN 204
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +1
Query: 259 PEEVSSMVLTKMKETAEAYLGETVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIIN 435
PEE+ M+L + E + +++ V+TVP +FN ++R+A A + GLNVL+I+N
Sbjct: 82 PEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMN 140
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 36.3 bits (80), Expect = 0.011
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLI 67
AND G+R TP+ VAF+DTE+LI
Sbjct: 89 ANDAGDRVTPAMVAFSDTEKLI 110
>SB_24060| Best HMM Match : GED (HMM E-Value=0.52)
Length = 297
Score = 31.1 bits (67), Expect = 0.41
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = -2
Query: 423 ENVQARDGTGIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLS 244
EN+++ T IFCG + I +RG RD+ ++ +F + L FR G L + + +
Sbjct: 73 ENLRSLFKTIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLEN 130
Query: 243 SPLYATLI 220
+P AT I
Sbjct: 131 APRNATYI 138
>SB_20011| Best HMM Match : GED (HMM E-Value=0.65)
Length = 427
Score = 29.9 bits (64), Expect = 0.95
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -2
Query: 399 TGIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 174 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 231
Query: 219 L 217
L
Sbjct: 232 L 232
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 171
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 101 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 3
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 1.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 119 RILCCWGSSPPGSWRH 72
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 1.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 119 RILCCWGSSPPGSWRH 72
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 399 TGIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 351 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 408
>SB_54876| Best HMM Match : EHN (HMM E-Value=3.8)
Length = 226
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 399 TGIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 126 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 183
>SB_47034| Best HMM Match : GED (HMM E-Value=0.52)
Length = 238
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 399 TGIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 34 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 91
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 5 NDQGNRTTPSYVAFT-DTERL 64
N +G+RTTPS VAFT + ERL
Sbjct: 11 NAEGSRTTPSVVAFTPEGERL 31
>SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/59 (23%), Positives = 21/59 (35%)
Frame = +3
Query: 240 VKTKPFPRGSQFHGAYENEGNCRSLSWRNCAECSYHGSRVLQ*LSKTSHKRCRYHLWLE 416
V PF +HG CR + W+ V++ + K S C +LE
Sbjct: 19 VSCSPFCEQVVYHGIKRKADECRQVEWQFSKHQKALTGHVIKTIDKPSESACETECYLE 77
>SB_19038| Best HMM Match : GED (HMM E-Value=0.52)
Length = 250
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 399 TGIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 34 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 91
>SB_46953| Best HMM Match : DUF1014 (HMM E-Value=0.83)
Length = 284
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 149 EDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFSPRKSVP 277
+DA A +H+ F K K + A+K + SP+K VP
Sbjct: 238 KDAYYDAFSRHYSFSAKHSSNKAKHQRAHKAITPSTSPKKHVP 280
>SB_39413| Best HMM Match : GED (HMM E-Value=0.81)
Length = 300
Score = 27.9 bits (59), Expect = 3.8
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -2
Query: 399 TGIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 81 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATSI 138
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 46 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 186
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 183 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 37
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
>SB_51718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1602
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 125 KRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFS 259
KR+I EDA D PF D IKV GE+ +S
Sbjct: 1452 KRMIFGLVEDAAYNGDYTKNPFNFQLDSKLTDIKVTVDGEETPYS 1496
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 125 KRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFS 259
KR+I EDA D PF D IKV GE+ +S
Sbjct: 1407 KRMIFGLVEDAAYNGDYTKNPFNFQLDSKLTDIKVTVDGEETPYS 1451
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 46 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRH 174
H R +R+ + GG +EP + R T T C+CA R+
Sbjct: 1181 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDAETCFCAKRY 1226
>SB_33718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 279 GAYENEGNC-RSLSWRNCAECSYHGSRVLQ*LSKTSHKRCRYH 404
G +N C SL W C + +HG +V++ S ++ C +H
Sbjct: 537 GKTQNPNECINSLVWARCPKHKHHGPKVVRFASASA--VCHFH 577
>SB_10449| Best HMM Match : Ribosomal_L22 (HMM E-Value=7.8)
Length = 274
Score = 27.1 bits (57), Expect = 6.7
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +2
Query: 125 KRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFS 259
KRLI EDA D P+ D IKV GE+ +S
Sbjct: 128 KRLIFGLVEDAAYNGDYTKNPYNFQLDSKLTDIKVTVDGEETPYS 172
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 77 AKNQVAMNPNNTIFDAKRLIGRKFEDATVQAD 172
AKNQ+ NP N + + L FED+ ++ D
Sbjct: 429 AKNQIGQNPTNHAKNQRYLKSIVFEDSLIRND 460
>SB_54912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 398 PASFVACL*ESLKYAGTVITAFCTVSPR*ASAVSFIFV 285
P S CL S++Y+ +T T+SP +++ ++FV
Sbjct: 63 PNSLCTCLLASMRYSAFHMTTQLTLSPYYHNSLQYLFV 100
>SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)
Length = 1624
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 46 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRH 174
H R +R+ + GG DEP + R T T C+CA ++
Sbjct: 705 HGERHGYRKLSRVCGGRRPDEPYERTARVHTILSTYAGACFCAKQY 750
>SB_43343| Best HMM Match : fn3 (HMM E-Value=3.4e-39)
Length = 2865
Score = 26.6 bits (56), Expect = 8.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 125 WHRILCCWGSSPPGSW 78
WH + W SS GSW
Sbjct: 511 WHHVCATWNSSALGSW 526
>SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1830
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 49 RHRASHRRCRQEPGGDEPQQHNI-RCQTSHR 138
R RASHR C + P P++H + R + +H+
Sbjct: 808 RGRASHRACARAPKMPPPERHALTRLRHTHQ 838
>SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5)
Length = 572
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 19 QDHSVLCCVHRHR-ASHRRCRQEPGGDEPQQHNIRCQTSHR 138
++H+ C HR R ++ GG EPQ CQ H+
Sbjct: 340 REHANTTCFENHRRVKPRGTKKRGGGGEPQVSWSYCQRYHK 380
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,725,453
Number of Sequences: 59808
Number of extensions: 310442
Number of successful extensions: 930
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 834771332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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