Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0519X.Seq
(436 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.37
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.48
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.48
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 1.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.9
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.0 bits (52), Expect = 0.37
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 234 IRVKTKPFPRGSQFHGAYENEGNCRSLSWRNCAE--CSYHGSR 356
+R +++ F R S H YE+ + S+RN E CS SR
Sbjct: 217 LRSRSRSFQRTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRSR 259
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 234 IRVKTKPFPRGSQFHGAYENEGNCRSLSWRNCAE--CSYHGSR 356
+R +++ F R S H YE+ + S+RN E CS SR
Sbjct: 217 LRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 234 IRVKTKPFPRGSQFHGAYENEGNCRSLSWRNCAE--CSYHGSR 356
+R +++ F R S H YE+ + S+RN E CS SR
Sbjct: 217 LRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 234 IRVKTKPFPRGSQFHGAYENEGNCRSLSWRNCAE--CSYHGSR 356
+R +++ F R S H YE+ + S+RN E CS SR
Sbjct: 217 LRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 234 IRVKTKPFPRGSQFHGAYENEGNCRSLSWRNCAE--CSYHGSR 356
+R +++ F R S H YE+ + S+RN E CS SR
Sbjct: 217 LRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 234 IRVKTKPFPRGSQFHGAYENEGNCRSLSWRNCAE--CSYHGSR 356
+R +++ F R S H YE+ + S+RN E CS SR
Sbjct: 217 LRSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.1
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 234 IRVKTKPFPRGSQFHGAYENEGNCRSLSWRNCAE--CSYHGSR 356
+R +++ F R S H YE+ + S+RN E CS SR
Sbjct: 217 LRSRSRSFQRTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRSR 259
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.0
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 243 KTKPFPRGSQFHGAYENEGNCRSLSWRNCAE--CSYHGSR 356
+++ F R S H YE+ + S+RN E CS SR
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 103 QQHNIRCQTSHR 138
Q H RC+T HR
Sbjct: 203 QIHGYRCRTMHR 214
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 103 QQHNIRCQTSHR 138
Q H RC+T HR
Sbjct: 203 QIHGYRCRTMHR 214
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 7.9
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -2
Query: 315 ISFGSFLHFRKHHGTDFLGEKVLSSPLYATLILGLPPSLTTS 190
+S + H R+H SS +L + +PPS+ S
Sbjct: 23 VSVAGYKHSRRHRDFTVAESYDASSSNSDSLSMTIPPSIDRS 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,572
Number of Sequences: 438
Number of extensions: 2393
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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