Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0518.Seq
(720 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 155 3e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 2e-37
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 150 1e-36
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 137 7e-33
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 98 7e-21
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 84 1e-16
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 55 5e-08
SB_24060| Best HMM Match : GED (HMM E-Value=0.52) 33 0.31
SB_20011| Best HMM Match : GED (HMM E-Value=0.65) 31 0.94
SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52) 29 2.9
SB_54876| Best HMM Match : EHN (HMM E-Value=3.8) 29 2.9
SB_47034| Best HMM Match : GED (HMM E-Value=0.52) 29 2.9
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 2.9
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.9
SB_19038| Best HMM Match : GED (HMM E-Value=0.52) 29 2.9
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.9
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.8
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.8
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 3.8
SB_39413| Best HMM Match : GED (HMM E-Value=0.81) 29 3.8
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 28 6.6
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 6.6
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 28 6.6
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 6.6
SB_46953| Best HMM Match : DUF1014 (HMM E-Value=0.83) 28 8.8
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 8.8
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.8
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 8.8
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 8.8
SB_7006| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 155 bits (377), Expect = 3e-38
Identities = 68/86 (79%), Positives = 79/86 (91%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNRTTPSYV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK
Sbjct: 30 ANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKL 89
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFS 259
WPF+++SD KPKI+V YKGE KTF+
Sbjct: 90 WPFKIISDNNKPKIQVEYKGERKTFA 115
Score = 145 bits (351), Expect = 4e-35
Identities = 71/90 (78%), Positives = 80/90 (88%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 417
G R+ EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLN
Sbjct: 109 GERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLN 168
Query: 418 VLRIINEPTAAAIAYGLDKKGTGERNVLIF 507
VLR+INEPTAAA+AYGLDK +GE+NVLIF
Sbjct: 169 VLRVINEPTAAALAYGLDKSLSGEKNVLIF 198
Score = 133 bits (321), Expect = 2e-31
Identities = 61/71 (85%), Positives = 67/71 (94%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 LGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKR 686
LGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N R
Sbjct: 200 LGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSR 259
Query: 687 ALRRLRTACER 719
A+RRLRTACER
Sbjct: 260 AMRRLRTACER 270
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 153 bits (370), Expect = 2e-37
Identities = 68/85 (80%), Positives = 76/85 (89%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKH
Sbjct: 30 ANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKH 89
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTF 256
W FEVV++ G+PK+KV YKGE KTF
Sbjct: 90 WSFEVVNEAGRPKVKVEYKGETKTF 114
Score = 138 bits (334), Expect = 4e-33
Identities = 69/81 (85%), Positives = 73/81 (90%)
Frame = +1
Query: 265 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 444
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 445 AAAIAYGLDKKGTGERNVLIF 507
AAAIAYGLDKK ERNVLIF
Sbjct: 271 AAAIAYGLDKKVGQERNVLIF 291
Score = 129 bits (311), Expect = 3e-30
Identities = 58/70 (82%), Positives = 65/70 (92%)
Frame = +3
Query: 510 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRA 689
LGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+ NKRA
Sbjct: 293 LGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRA 352
Query: 690 LRRLRTACER 719
LRRLRTACER
Sbjct: 353 LRRLRTACER 362
Score = 85.0 bits (201), Expect = 5e-17
Identities = 41/54 (75%), Positives = 45/54 (83%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 399
G + F EE+SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 134 GETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 150 bits (363), Expect = 1e-36
Identities = 66/89 (74%), Positives = 76/89 (85%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
ANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM H
Sbjct: 30 ANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTH 89
Query: 182 WPFEVVSDGGKPKIKVAYKGEDKTFSPRK 268
WPF V+ +G +PKI+V +KGE K+F P +
Sbjct: 90 WPFHVIREGERPKIQVEFKGEKKSFFPEE 118
Score = 149 bits (361), Expect = 2e-36
Identities = 73/90 (81%), Positives = 82/90 (91%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 417
G +++ FPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLN
Sbjct: 109 GEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLN 168
Query: 418 VLRIINEPTAAAIAYGLDKKGTGERNVLIF 507
VLRIINEPTAAAIAYGLDKK ERNVLI+
Sbjct: 169 VLRIINEPTAAAIAYGLDKKVGVERNVLIY 198
Score = 136 bits (330), Expect = 1e-32
Identities = 60/70 (85%), Positives = 68/70 (97%)
Frame = +3
Query: 510 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRA 689
LGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ NKRA
Sbjct: 200 LGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRA 259
Query: 690 LRRLRTACER 719
+RRLRTACER
Sbjct: 260 MRRLRTACER 269
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 137 bits (332), Expect = 7e-33
Identities = 65/82 (79%), Positives = 76/82 (92%)
Frame = +1
Query: 262 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEP 441
EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEP
Sbjct: 815 EEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEP 874
Query: 442 TAAAIAYGLDKKGTGERNVLIF 507
TAAAIAYG+DKK GE+N+L+F
Sbjct: 875 TAAAIAYGMDKK-EGEKNILVF 895
Score = 116 bits (280), Expect = 1e-26
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMK 178
ANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K
Sbjct: 727 ANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLK 786
Query: 179 HWPFEVVSDGGKPKIKVAYKGEDKTFS 259
+PF+VV KP ++V K E KTF+
Sbjct: 787 FFPFKVVDKNKKPHVQVKVKDEIKTFA 813
Score = 91.1 bits (216), Expect = 8e-19
Identities = 38/70 (54%), Positives = 56/70 (80%)
Frame = +3
Query: 510 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRA 689
LGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++ + RA
Sbjct: 897 LGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRA 956
Query: 690 LRRLRTACER 719
+++LR E+
Sbjct: 957 VQKLRREVEK 966
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 97.9 bits (233), Expect = 7e-21
Identities = 59/112 (52%), Positives = 75/112 (66%), Gaps = 26/112 (23%)
Frame = +1
Query: 238 G*RQNLFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 417
G +++ PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 8 GEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLD 67
Query: 418 ------------------------VLRIINEPTAAAIAYGLDKK--GTGERN 495
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 68 VLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/70 (57%), Positives = 54/70 (77%)
Frame = +3
Query: 510 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRA 689
LGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+ + A
Sbjct: 7 LGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLSKDSMA 66
Query: 690 LRRLRTACER 719
L+RLR A E+
Sbjct: 67 LQRLREAAEK 76
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/82 (51%), Positives = 57/82 (69%)
Frame = +1
Query: 259 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 438
PEE+ V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INE
Sbjct: 146 PEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINE 205
Query: 439 PTAAAIAYGLDKKGTGERNVLI 504
PTAAA+AYGL KK G NV++
Sbjct: 206 PTAAALAYGLHKK-EGVANVMV 226
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKH 181
+++ ++ PS VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F + K
Sbjct: 59 SDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKL 118
Query: 182 WPFEVVSD-GGKPKIKVAYKGEDKTFSPRK 268
+ F V +D G V KG +P +
Sbjct: 119 YQFRVTTDKRGNAGFLVGKKGNFTVITPEE 148
Score = 57.6 bits (133), Expect = 9e-09
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +3
Query: 510 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRA 689
LGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L T
Sbjct: 229 LGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TCSED 287
Query: 690 LRRLRTACE 716
++RLR E
Sbjct: 288 IQRLRQEVE 296
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 75.4 bits (177), Expect = 4e-14
Identities = 35/79 (44%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +1
Query: 244 RQNLF-PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 420
+Q +F PE+V +M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN
Sbjct: 167 KQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNC 226
Query: 421 LRIINEPTAAAIAYGLDKK 477
LR++N+ TA ++AYG+ K+
Sbjct: 227 LRLMNDTTAVSLAYGIYKQ 245
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +3
Query: 501 YLCLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 680
++ +G + V I G +V STA + +LGG DFD +V HF QEFK KYK D+ ++
Sbjct: 257 FVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSS 316
Query: 681 KRALRRLRTACER 719
+A +L CE+
Sbjct: 317 IKAKIKLGAECEK 329
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 98 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFSPRK 268
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + FSP +
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQ 175
Score = 35.5 bits (78), Expect = 0.044
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLIGDAAKNQ 88
AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 27 ANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 259 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 438
PEE+ M+L + E + +++ V+TVP +FN ++R+A A + GLNVL+I+N
Sbjct: 82 PEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNS 141
Query: 439 PTAAAIAYGL 468
TA A+ YGL
Sbjct: 142 NTAVALNYGL 151
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 567 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRR 698
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ +
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAK 246
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Frame = +3
Query: 510 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KYKKDLA 674
LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR K+K D
Sbjct: 161 LGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWKIDPL 220
Query: 675 TNKRALRRLRTACER 719
TNKR+ +L+T+ E+
Sbjct: 221 TNKRSKTKLQTSAEQ 235
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 2 ANDQGNRTTPSYVAFTDTERLI 67
AND G+R TP+ VAF+DTE+LI
Sbjct: 89 ANDAGDRVTPAMVAFSDTEKLI 110
>SB_24060| Best HMM Match : GED (HMM E-Value=0.52)
Length = 297
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -1
Query: 462 VSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRK 283
++N + + EN+++ T IFCG + I +RG RD+ ++ +F + L FR
Sbjct: 60 LNNIVQQQIARNRENLRSLFKTIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRV 117
Query: 282 HHGTDFLGEKVLSSPLYATLI 220
G L + + ++P AT I
Sbjct: 118 DSGDQILEQHLENAPRNATYI 138
>SB_20011| Best HMM Match : GED (HMM E-Value=0.65)
Length = 427
Score = 31.1 bits (67), Expect = 0.94
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -1
Query: 399 TCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 174 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 231
Query: 219 L 217
L
Sbjct: 232 L 232
>SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Frame = +1
Query: 466 LDKKGTGERNVLIFASAAVPSTCPSLPSRMVSSR*NPPPATPTW-EVRTLTIAWSTTLSR 642
L KK + ++L A V S L + SS + PP TPT T++ STT S
Sbjct: 10 LVKKDSKGGDMLCMAMPPVSSQDELLLTSAASSPSHTPPGTPTTPTTSTVSFLPSTTPSS 69
Query: 643 SSRGNT-------KRTSLPTRELLGVCVLHVR 717
SS+G + KR S T ++ V L ++
Sbjct: 70 SSQGTSSTSKSKKKRKSKKTTPIIAVIALFIQ 101
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 623 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 712
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/59 (25%), Positives = 21/59 (35%)
Frame = +3
Query: 240 VKTKPFPRGSQFHGAYENEGNCRSLSWQNCAECSYHGSRVLQ*LSKTSHKRCRYHLWLE 416
V PF +HG CR + WQ V++ + K S C +LE
Sbjct: 19 VSCSPFCEQVVYHGIKRKADECRQVEWQFSKHQKALTGHVIKTIDKPSESACETECYLE 77
>SB_56721| Best HMM Match : DUF755 (HMM E-Value=0.52)
Length = 516
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 399 TCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 351 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 408
>SB_54876| Best HMM Match : EHN (HMM E-Value=3.8)
Length = 226
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 399 TCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 126 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 183
>SB_47034| Best HMM Match : GED (HMM E-Value=0.52)
Length = 238
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 399 TCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 34 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 91
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 171
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 574 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 690
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_19038| Best HMM Match : GED (HMM E-Value=0.52)
Length = 250
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 399 TCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 34 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATYI 91
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 101 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 3
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 119 RILCCWGSSPPGSWRH 72
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 119 RILCCWGSSPPGSWRH 72
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +1
Query: 280 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 429
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 430 INEPTAAAIAYGLDKKGTG 486
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_39413| Best HMM Match : GED (HMM E-Value=0.81)
Length = 300
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -1
Query: 399 TCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKVLSSPLYATLI 220
T IFCG + I +RG RD+ ++ +F + L FR G L + + ++P AT I
Sbjct: 81 TIIFCGKNN--IPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQILEQHLENAPRNATSI 138
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 513 GGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 611
G GT VS + +E+G +++ D H+ G F
Sbjct: 1528 GDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 519 GTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 611
G+F VS E+GI ++ GD H+ G F
Sbjct: 1437 GSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 511 SAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 648
S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 99 SSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 632 LCPGVQEEIQKGPRYQQESS*AFAYCM 712
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 5 NDQGNRTTPSYVAFT-DTERL 64
N +G+RTTPS VAFT + ERL
Sbjct: 11 NAEGSRTTPSVVAFTPEGERL 31
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 632 LCPGVQEEIQKGPRYQQESS*AFAYCM 712
LCP ++ + GP +++E AFA C+
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCV 195
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 632 LCPGVQEEIQKGPRYQQESS*AFAYCM 712
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_46953| Best HMM Match : DUF1014 (HMM E-Value=0.83)
Length = 284
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 149 EDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFSPRKSVP 277
+DA A +H+ F K K + A+K + SP+K VP
Sbjct: 238 KDAYYDAFSRHYSFSAKHSSNKAKHQRAHKAITPSTSPKKHVP 280
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 526 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 690
S CPSLP+ S TP + TI T + SS T TS PT ++
Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 504 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 418
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 46 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 186
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 183 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 37
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
>SB_7006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +1
Query: 325 TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI--AYGLDKKGTGERNV 498
T A I + + D TI+ + V+ I TA I A + T +
Sbjct: 37 TTATATIAIAIAIAITMTDTMTDTITITIIIVITITTNTTAITITTAIIITTAITITTAI 96
Query: 499 LIFASAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL 612
+IF ++++P P LP +V R + W++ T+
Sbjct: 97 IIFTASSLPWLSPPLPLNIVFLRNKQTFRSENWQLATI 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,343,624
Number of Sequences: 59808
Number of extensions: 544926
Number of successful extensions: 2054
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2048
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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