Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0517.Seq
(680 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38392 Cluster: Superinfection exclusion protein B; n=3... 130 3e-29
UniRef50_UPI0000047C99 Cluster: UPI0000047C99 related cluster; n... 111 2e-23
UniRef50_P76061 Cluster: Uncharacterized protein ydaG; n=2; Esch... 94 3e-18
UniRef50_P0ACW1 Cluster: Uncharacterized protein ydaF; n=10; Ent... 87 4e-16
UniRef50_Q3Z435 Cluster: Hypothetical prophage protein; n=3; Ent... 76 7e-13
UniRef50_P0ACW9 Cluster: Uncharacterized protein ydfA; n=17; Ent... 76 7e-13
UniRef50_Q8X2Z5 Cluster: Putative uncharacterized protein ECs106... 73 6e-12
UniRef50_A0IWM5 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q573B9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q11RH6 Cluster: UDP-N-acetylmuramate--L-alanine ligase;... 33 6.4
UniRef50_A3VI94 Cluster: NADH:ubiquinone oxidoreductase 41 kD co... 33 6.4
UniRef50_UPI0000E46CE1 Cluster: PREDICTED: hypothetical protein;... 33 8.5
>UniRef50_P38392 Cluster: Superinfection exclusion protein B; n=3;
Escherichia coli|Rep: Superinfection exclusion protein B
- Escherichia coli (strain K12)
Length = 162
Score = 130 bits (314), Expect = 3e-29
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +3
Query: 3 SEKEIAVFKDFLKTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMK 182
SEKEIAVFKDFLKTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMK
Sbjct: 91 SEKEIAVFKDFLKTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMK 150
>UniRef50_UPI0000047C99 Cluster: UPI0000047C99 related cluster; n=1;
unknown|Rep: UPI0000047C99 UniRef100 entry - unknown
Length = 58
Score = 111 bits (266), Expect = 2e-23
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +1
Query: 256 SFGFKCFAFGIRHGSERSILVGEHAAHQGFVVAEVDFLHFANLTSCCYV 402
SFGFKCFAFGIRHGSERSILVGEHAAHQGFVVAEVDFLHFANLTSCCYV
Sbjct: 10 SFGFKCFAFGIRHGSERSILVGEHAAHQGFVVAEVDFLHFANLTSCCYV 58
>UniRef50_P76061 Cluster: Uncharacterized protein ydaG; n=2;
Escherichia coli|Rep: Uncharacterized protein ydaG -
Escherichia coli (strain K12)
Length = 44
Score = 93.9 bits (223), Expect = 3e-18
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 508 YEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM 386
YEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM
Sbjct: 4 YEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM 44
>UniRef50_P0ACW1 Cluster: Uncharacterized protein ydaF; n=10;
Enterobacteriaceae|Rep: Uncharacterized protein ydaF -
Escherichia coli O157:H7
Length = 51
Score = 87.0 bits (206), Expect = 4e-16
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -3
Query: 372 MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTET 256
MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTET
Sbjct: 1 MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTET 39
>UniRef50_Q3Z435 Cluster: Hypothetical prophage protein; n=3;
Enterobacteriaceae|Rep: Hypothetical prophage protein -
Shigella sonnei (strain Ss046)
Length = 51
Score = 76.2 bits (179), Expect = 7e-13
Identities = 35/38 (92%), Positives = 35/38 (92%)
Frame = -3
Query: 372 MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTE 259
M IDLGNNESLV GVFPNQDGTFTAMTYTKSKTFKTE
Sbjct: 1 MNTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTE 38
>UniRef50_P0ACW9 Cluster: Uncharacterized protein ydfA; n=17;
Enterobacteriaceae|Rep: Uncharacterized protein ydfA -
Escherichia coli O157:H7
Length = 51
Score = 76.2 bits (179), Expect = 7e-13
Identities = 35/38 (92%), Positives = 35/38 (92%)
Frame = -3
Query: 372 MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTE 259
M IDLGNNESLV GVFPNQDGTFTAMTYTKSKTFKTE
Sbjct: 1 MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTE 38
>UniRef50_Q8X2Z5 Cluster: Putative uncharacterized protein ECs1066;
n=1; Escherichia coli O157:H7|Rep: Putative
uncharacterized protein ECs1066 - Escherichia coli
O157:H7
Length = 72
Score = 72.9 bits (171), Expect = 6e-12
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -1
Query: 677 TTNPAPQNAGQYFELPGSGKGLSSQPEAYEHDGGIQI 567
TT+PAPQNAGQYFELP SG+G+SSQPEAYEHDG +Q+
Sbjct: 36 TTHPAPQNAGQYFELPSSGQGVSSQPEAYEHDGRVQL 72
>UniRef50_A0IWM5 Cluster: Putative uncharacterized protein; n=1;
Serratia proteamaculans 568|Rep: Putative
uncharacterized protein - Serratia proteamaculans 568
Length = 74
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = -3
Query: 369 QKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTET 256
+ +D GNNE + GVFPN DGTFTAMTYT+S+TFKTE+
Sbjct: 25 ETLDCGNNERVKMGVFPNGDGTFTAMTYTQSRTFKTES 62
>UniRef50_Q573B9 Cluster: Putative uncharacterized protein; n=1;
Acidianus filamentous virus 2|Rep: Putative
uncharacterized protein - Acidianus filamentous virus 2
Length = 116
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 290 RIPKAKHLKPKLCAPMVGEAHSKLTIKTSTPAVPE*LHKMGVFFGDEIIR 141
R+ KA H +C P+V E H I PE + + +FGD+I R
Sbjct: 19 RVYKAIHELSMICKPVVKETHKGYHIYCDIELSPEKIMNLRYYFGDDIWR 68
>UniRef50_Q11RH6 Cluster: UDP-N-acetylmuramate--L-alanine ligase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
UDP-N-acetylmuramate--L-alanine ligase - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 466
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 253 HSFGFKCFAF--GIRHGSERSILVGEHAAHQGFVVAEVD 363
H G C AF GI +IL+G H G+VVAE D
Sbjct: 135 HESGMPCSAFLGGITQNYNTNILIGNHGDGAGWVVAEAD 173
>UniRef50_A3VI94 Cluster: NADH:ubiquinone oxidoreductase 41 kD
complex I subunit; n=1; Rhodobacterales bacterium
HTCC2654|Rep: NADH:ubiquinone oxidoreductase 41 kD
complex I subunit - Rhodobacterales bacterium HTCC2654
Length = 298
Score = 33.1 bits (72), Expect = 6.4
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = -1
Query: 374 KCKKSTSATTNPWCAACSPTRMERSLP*RIPKAKHLKPKLC-APMVGEAHSKLTIKTSTP 198
K +K SA ++ E + P P A P+L P G A IK P
Sbjct: 165 KYEKEPSAKPAAKTKTAKTSKAETAKPAAAPVAAGEGPELLDGPKGGVADDLKLIKGVGP 224
Query: 197 AVPE*LHKMGVFFGDEIIRTVCAITLMLNDALPF 96
+ + LH GVF D+I + A +++D L F
Sbjct: 225 GIEKKLHDAGVFHYDQIAQWTDADIAVMDDKLSF 258
>UniRef50_UPI0000E46CE1 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 405
Score = 32.7 bits (71), Expect = 8.5
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 680 YTTNPAPQNAGQYFELPGSGKGLSSQ-PEAY 591
Y+TNP P +A Y+ PG G G ++ P AY
Sbjct: 12 YSTNPPPSSAQAYYSPPGPGGGYATDYPNAY 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,394,278
Number of Sequences: 1657284
Number of extensions: 15268689
Number of successful extensions: 35292
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 34158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35285
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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