Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0513.Seq
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O77435 Cluster: EG:34F3.4 protein; n=2; Drosophila mela...    36   1.3  
UniRef50_A2CF32 Cluster: Novel protein; n=8; Euteleostomi|Rep: N...    33   7.1  
UniRef50_Q0N438 Cluster: IAP-2; n=1; Clanis bilineata nucleopoly...    33   9.4  
UniRef50_Q5KAS0 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_O77435 Cluster: EG:34F3.4 protein; n=2; Drosophila
           melanogaster|Rep: EG:34F3.4 protein - Drosophila
           melanogaster (Fruit fly)
          Length = 1045

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +3

Query: 210 DLLLTFMEEHPDFAAANRQFIHAIVRVSFGGCWRSD*MLLPLILEAQESRLISGLAT 380
           D +L  +EE P+ A  N+  +++++ + F G W      LPL+L AQ  +LI  L T
Sbjct: 145 DRVLAELEESPEVAEHNQGLVNSLINMHFEGRWLVAKEQLPLLL-AQSLQLIQKLVT 200


>UniRef50_A2CF32 Cluster: Novel protein; n=8; Euteleostomi|Rep:
           Novel protein - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 543

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -1

Query: 455 LRQRKGHRGHHLQLIFFVPCILYQPS----SETTYQATFLRLQYQRQQHLVAPPATSKAY 288
           + Q  G  G H   +  VP I  +P+    +E++++A FL+     ++H  APP T    
Sbjct: 163 VEQAHGSSGIHSNKVPSVPHIAEKPTPEGKAESSFEAEFLQTHNAYRKHHGAPPLTININ 222

Query: 287 SNYSVNKLPVCRCKIRVLFHKS 222
            + S  K       IR L H +
Sbjct: 223 LSRSAQKWAEHLLSIRTLMHSN 244


>UniRef50_Q0N438 Cluster: IAP-2; n=1; Clanis bilineata
           nucleopolyhedrosis virus|Rep: IAP-2 - Clanis bilineata
           nucleopolyhedrosis virus
          Length = 306

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 18/64 (28%), Positives = 32/64 (50%)
 Frame = -1

Query: 392 LYQPSSETTYQATFLRLQYQRQQHLVAPPATSKAYSNYSVNKLPVCRCKIRVLFHKSQQ* 213
           L Q S +   Q+    +++    H+V    T+  Y N++ NK+  C CKI +L    +  
Sbjct: 96  LLQKSVDLRLQSFNSSIKHSHSTHIVRELVTNGFYLNHNDNKIYCCLCKIVLLKLNKKDS 155

Query: 212 VQLL 201
           ++LL
Sbjct: 156 IRLL 159


>UniRef50_Q5KAS0 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 870

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 493 VTQTKRGSHSDEDHKLTPLDDDMRSDTSVPSTSDAPRPST 612
           V    R +  DE+ K+  L ++  +DTS PS   AP P T
Sbjct: 251 VASQSRPTKPDEEEKIEELSEEPVTDTSTPSAPTAPGPPT 290


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,946,660
Number of Sequences: 1657284
Number of extensions: 10323532
Number of successful extensions: 27949
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27937
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)