Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0513.Seq
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.8  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 441 FPLPKSVSKISSTI 482
           +P P SV+KISST+
Sbjct: 72  WPQPTSVTKISSTL 85


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 395 ILYQPSSETTYQATFLRLQYQRQQHLV 315
           ILY    E  Y +  LR+Q+Q++  LV
Sbjct: 331 ILYFICDEAHYASNCLRVQFQKKLLLV 357


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 685 LGQQILPVSQQLRHYALQLQQVTPQC 608
           LG+ ++P      +YA  L++   QC
Sbjct: 463 LGRAVVPTLDATSYYAKDLEKQRQQC 488


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,322
Number of Sequences: 336
Number of extensions: 2749
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)