Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0513.Seq
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    31   0.036
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   4.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.2  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   7.2  

>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 31.1 bits (67), Expect = 0.036
 Identities = 27/88 (30%), Positives = 35/88 (39%)
 Frame = -1

Query: 494 THNCYC*RYFGDALRQRKGHRGHHLQLIFFVPCILYQPSSETTYQATFLRLQYQRQQHLV 315
           T +C C  Y  D+ R    H G+       VPC  + P  ET     F+R      + L 
Sbjct: 128 TTDCCCLAY--DSFRCYLQHYGN------LVPCARFYPEDETR----FVRAAQDCIEFLQ 175

Query: 314 APPATSKAYSNYSVNKLPVCRCKIRVLF 231
            P    K+YS  S    P  RC +R  F
Sbjct: 176 IPHKLLKSYSAGSFPDAPETRCLLRCFF 203


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 673 ILPVSQQLRHYA-LQLQQVTPQCLVEEHQKL 584
           +L V Q  +  A L LQQ  P C++EE   +
Sbjct: 274 LLEVLQDTKENAILLLQQQIPNCIIEERSNI 304


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -1

Query: 377  SETTYQATFLRLQYQRQQHLVAPPATSKAYSNYSVNKLPVCRCKIR 240
            +ET   A     Q ++ + L  PP + +      VN+L V R + R
Sbjct: 1059 NETRNAARRAATQQRQAERLPPPPPSPRTERRREVNRLAVARLRER 1104


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = -1

Query: 473 RYFGDALRQRKGHRGHHLQ-LIFFVPCILYQPSSETTYQATFLRLQYQRQQHLVAPPATS 297
           R+    L+Q+    GH  Q L+  +   + Q    T          YQ+QQ  V PP  +
Sbjct: 588 RHMVQVLKQQLVLEGHDKQFLLSRLSLFIKQQQDNTANNVIPPPSAYQQQQPPVVPPPRT 647

Query: 296 KAYSNYS 276
            + S  S
Sbjct: 648 NSQSQAS 654


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 332 RQQHLVAPPATSKAYSNYSVNKLPVCRC 249
           R +    P   + AY  ++V KLP C C
Sbjct: 211 RYRSATEPIDVAYAYLFFAVGKLPSCSC 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,472
Number of Sequences: 2352
Number of extensions: 11232
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)