Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0513.Seq
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical p... 29 3.4
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 29 3.4
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 29 3.4
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 29 3.4
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 29 3.4
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 29 3.4
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66516-1|CAA91358.3| 251|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 29 3.4
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 29 3.4
U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical p... 28 5.9
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 28 5.9
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 28 5.9
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 28 5.9
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 5.9
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 5.9
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 357 RLISGLATGLI*NTRHEENQLQVVPSVTFPLPKSVSKISSTIAIVCHTNQE 509
+L + TG+I TRH E P+V L +SV++ S+T+ IV T+ +
Sbjct: 507 QLFTVTKTGIISETRHNETIRMSSPAVNVSL-ESVTRSSATLRIVFSTHHD 556
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 357 RLISGLATGLI*NTRHEENQLQVVPSVTFPLPKSVSKISSTIAIVCHTNQE 509
+L + TG+I TRH E P+V L +SV++ S+T+ IV T+ +
Sbjct: 507 QLFTVTKTGIISETRHNETIRMSSPAVNVSL-ESVTRSSATLRIVFSTHHD 556
>Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical
protein F32D8.2 protein.
Length = 568
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 173 STHFCFDDMLYIKLVYFKSYTNKMTNLLIFIFTNNLVNIFKKLK 42
S HF D+ K+ N M +LL+ + +N +N+F+K K
Sbjct: 212 SKHFMQDNQFRFAQFMSKNEPNSMQDLLLQLGISNKINMFRKAK 255
>Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical
protein T05A10.1k protein.
Length = 582
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 215 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 267
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 192 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 244
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 192 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 244
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 192 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 244
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 192 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 244
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 192 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 244
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 192 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 244
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 192 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 244
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 215 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 267
>Z66516-1|CAA91358.3| 251|Caenorhabditis elegans Hypothetical
protein W03C9.1 protein.
Length = 251
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 463 PKYLQQ*QLCVTQTKRGSHSDEDHKLTPLDDDMRSDTSV---PSTSDAPRPS 609
PKY+++ + V QT+RG S +D+ T +D + S+ P+T + R S
Sbjct: 141 PKYVEKLRSRVRQTRRGKKSPQDYYCTDEEDSLFDVPSLKIDPATLKSSRSS 192
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 215 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 267
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -2
Query: 676 QILPVSQQLRHYALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDLHQS 518
QIL + QQL+ Q QQ+ Q L ++ + +L+ Q ++ ++ V + Q+
Sbjct: 192 QILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQA 244
>U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical
protein C53B7.7 protein.
Length = 437
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 85 NINKFVILLV*LLKYTNFIYNMSS 156
NI + + V L KYTNFIYN+ S
Sbjct: 171 NITNAIKMPVSLTKYTNFIYNLLS 194
>U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical
protein F10E7.1 protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -1
Query: 143 YIKLVYFKSYTNKMTNLLIFIFTNNLVNIFKKLKPPIET*KYLHYC 6
YI L Y K +NKM++ F+ V I K + P + H+C
Sbjct: 127 YIYLNYQKVTSNKMSSFFRFLKDTVAVKIVKLILEPARGFPFSHFC 172
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 383 PSSETTYQATFLRLQYQRQQHLVAPPATSKAYSNYSVNKL 264
PS+ TT LR + Q H APP ++ S SV++L
Sbjct: 435 PSTTTTSGRPLLRSMREAQFHSAAPPISAPNQSQTSVSQL 474
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 383 PSSETTYQATFLRLQYQRQQHLVAPPATSKAYSNYSVNKL 264
PS+ TT LR + Q H APP ++ S SV++L
Sbjct: 435 PSTTTTSGRPLLRSMREAQFHSAAPPISAPNQSQTSVSQL 474
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 383 PSSETTYQATFLRLQYQRQQHLVAPPATSKAYSNYSVNKL 264
PS+ TT LR + Q H APP ++ S SV++L
Sbjct: 435 PSTTTTSGRPLLRSMREAQFHSAAPPISAPNQSQTSVSQL 474
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine
nucleotide exchange factorfor RAS protein.
Length = 1413
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 643 YALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDL 527
+A LQ V + HQ+L + KYQ A + ++ES + L
Sbjct: 89 FAFGLQTVCKEAWDNMHQQLQKHKYQKALKTVLESQHRL 127
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 643 YALQLQQVTPQCLVEEHQKLMELKYQNACRRLVESVYDL 527
+A LQ V + HQ+L + KYQ A + ++ES + L
Sbjct: 89 FAFGLQTVCKEAWDNMHQQLQKHKYQKALKTVLESQHRL 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,799,977
Number of Sequences: 27780
Number of extensions: 254327
Number of successful extensions: 773
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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