Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0510.Seq
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.12 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.49 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.49 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.49 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.49 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 204 VICKYFIYLFIYIYACIIRSFLIFIVYPISHALARVC 314
           ++C Y+ Y    I  C+   +  FI++ + H L  +C
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIFTV-HLLFLLC 132



 Score = 26.6 bits (56), Expect = 0.21
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 186 TCVVLCVICKYFIYLFIYIYACIIRSFLIFIVYP 287
           T  +L ++C Y+ Y  + I  CI      FI++P
Sbjct: 276 TMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFP 309



 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +3

Query: 186 TCVVLCVICKYFIYLFIYIYACIIRSFLIFIVYPISHALARVC 314
           T  +L ++C Y+  + ++   CI   +  FI++ + H L  +C
Sbjct: 124 TVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTV-HLLFLLC 165



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 186 TCVVLCVICKYFIYLFIYIYACIIRSFLIFIVY 284
           T  +L ++C Y+ Y    ++ C   +F+IF ++
Sbjct: 249 TVHLLLLVCIYYFYYMHLLFCC---AFIIFTMH 278



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 189 CVVLCVICKYFIYLFIYIYACIIRSFLIFIVY 284
           CV++ ++C Y+ Y + +I   +    L+ I Y
Sbjct: 230 CVLIILLCIYYFY-YAFILFTVHLLLLVCIYY 260



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 598 LVFLTCVCVRCTTVFYMFIIIYF 666
           L+FL C+      +F++  I YF
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYF 149


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +3

Query: 213 KYFIYLFIYIYACIIRSFLIFIVY 284
           +YFIY+F+ ++ C++  F + +++
Sbjct: 295 RYFIYMFVSVWKCLL--FFVSVLF 316


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +3

Query: 213 KYFIYLFIYIYACIIRSFLIFIVY 284
           +YFIY+F+ ++ C++  F + +++
Sbjct: 295 RYFIYMFVSVWKCLL--FFVSVLF 316


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +3

Query: 213 KYFIYLFIYIYACIIRSFLIFIVY 284
           +YFIY+F+ ++ C++  F + +++
Sbjct: 295 RYFIYMFVSVWKCLL--FFVSVLF 316


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +3

Query: 213 KYFIYLFIYIYACIIRSFLIFIVY 284
           +YFIY+F+ ++ C++  F + +++
Sbjct: 295 RYFIYMFVSVWKCLL--FFVSVLF 316


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +3

Query: 540 DTSALESENAVIERKTHRRFSFLNVCVRALYHRVLYVYYYIFLRFEISNIIIFM 701
           ++ A E +N V +       SFL +   +  H V Y+    F RFE S    F+
Sbjct: 183 ESLACELKNTVDDFNDIFGISFLLIISYSTLHFVNYIDDLFFFRFEKSKFEPFL 236


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 146  TTFTSSK*SSLVNFPTTPTAVKPPRV 69
            TT T+++  +  N+PT  T + PP V
Sbjct: 1067 TTSTTTR-PTTTNWPTQGTTIPPPAV 1091


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 654 YYIFLRFEISNIIIFMYKMR 713
           YY FL   + NI+I  +K R
Sbjct: 180 YYEFLLISLINILIRSFKSR 199


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +3

Query: 204 VICKYFIYLFIYIYACIIRSFL 269
           V  ++F+Y+ +YI A +  +++
Sbjct: 135 VSVQFFVYVILYILATVFLAYV 156


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +3

Query: 204 VICKYFIYLFIYIYACIIRSFL 269
           V  ++F+Y+ +YI A +  +++
Sbjct: 135 VSVQFFVYVILYILATVFLAYV 156


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 190 HVNDPSAGSPTETXXXXXXXLNDQVWS 110
           HV+  S  SPT          N  +WS
Sbjct: 194 HVSTGSTSSPTIASATYTNSANSSIWS 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,785
Number of Sequences: 336
Number of extensions: 2899
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)