Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0510.Seq
         (741 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39080.1 68418.m04728 transferase family protein similar to a...    29   2.4  
At4g28270.1 68417.m04049 zinc finger (C3HC4-type RING finger) fa...    27   9.9  

>At5g39080.1 68418.m04728 transferase family protein similar to
           anthocyanin 5-aromatic acyltransferase from Gentiana
           triflora GI:4185599, malonyl CoA:anthocyanin
           5-O-glucoside-6'''-O-malonyltransferase from Perilla
           frutescens GI:17980232, Salvia splendens GI:17980234;
           contains Pfam profile PF02458 transferase family
          Length = 463

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 219 FIYLFIYIYACIIRSFLIFIVYPISHALARVCRDDIESDC*HYISNTAAYCTR 377
           F+ ++ Y+  CIIR+       P+ +A +  CR  +     +Y  N  A C+R
Sbjct: 289 FVIVYSYVLVCIIRARGGEPHRPVGYAFSVDCRSLMNPPTPNYFGNCIAGCSR 341


>At4g28270.1 68417.m04049 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 zinc
           finger, C3HC4 type (RING finger)
          Length = 193

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 547 VRSRARTR*SKEKLTDVLVFLTCVCVRCTTVF 642
           VRSR R   ++E L+ V +FL C    C  +F
Sbjct: 162 VRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,721,166
Number of Sequences: 28952
Number of extensions: 218414
Number of successful extensions: 576
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)