Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0509.Seq
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 56 5e-09
SPAC13D6.05 |alp11|SPAC4G9.01|tubulin specific chaperone cofacto... 54 2e-08
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.52
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 29 0.52
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 0.91
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.2
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 28 1.2
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 28 1.2
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 27 2.1
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 27 2.8
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 27 3.7
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 26 4.9
SPCC1183.04c |pet127||mitochondrial membrane protein Pet127|Schi... 26 6.4
SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+] |Schizosacc... 25 8.5
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 25 8.5
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 56.0 bits (129), Expect = 5e-09
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +3
Query: 264 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 443
+G+ V + G + G + + G T F G W G+ L GKNDGSV G RYF C + +G+F
Sbjct: 6 VGDEVLIRG-ELGIVRFAGSTDFESGIWLGVELLNGKGKNDGSVKGKRYFSCEKGKGIFV 64
Query: 444 R 446
R
Sbjct: 65 R 65
>SPAC13D6.05 |alp11|SPAC4G9.01|tubulin specific chaperone cofactor
B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 54.4 bits (125), Expect = 2e-08
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 264 IGERVWVGGTKPGQIAYIGETQFAPGE--WAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 437
+ R G + G I YIG + W G+ DEP+GKNDG+V+G RYF K G
Sbjct: 154 LNSRCCAAGERYGTIRYIGLVPEINNDNLWVGVEFDEPVGKNDGTVSGKRYFNAKNKHGS 213
Query: 438 FSR 446
F R
Sbjct: 214 FLR 216
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1379
Score = 29.5 bits (63), Expect = 0.52
Identities = 15/60 (25%), Positives = 34/60 (56%)
Frame = +1
Query: 130 MPVETKISFSDGSSTDTLRKLSDDLSRKHLSDHSVILTEDTEASLLVNVFG*AVRSLDKS 309
+P++ K+S S SST +++ L + ++KH+ HS I D ++ ++ ++ +K+
Sbjct: 855 LPMKKKLSHSSASSTRSIKSLLTNANQKHI--HSSINETDDIPTMAAHIVATGQKNKEKA 912
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 29.5 bits (63), Expect = 0.52
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 370 QLVKTMDQWQAFVIFNVQRNEVCFLD*LGSLEFPSLYTHRTMHRPCRCGE 519
Q V + Q F++F + N C+LD + +LY + PC G+
Sbjct: 500 QFVHNLSQKLLFLVFQLSTNTNCYLDSKNATSLLALYINALKVFPCLMGK 549
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.7 bits (61), Expect = 0.91
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 651 VRISPLVVVEIEAFILLLTILRILPFGERVRLGRAAPEGG 532
+++ PL+ E++ F L+TI R+L G + L + E G
Sbjct: 47 IKVQPLLANEVQTFKALITIHRVLQEGHKSALVDSQSEKG 86
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 1.2
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Frame = +2
Query: 413 SMSRETRCVFSIDSAH*SSLRYTHTARCIARVDAGSVFERPPSGAAR-PKRTLSPNGSIR 589
S S T +I S+ SS ++ T + + S P S ++ + SP+ S
Sbjct: 296 SSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSF 355
Query: 590 SIV--SSKMNASISTTTNGDIRTGDRVIVSSSRGS 688
S SSK ++S S+T + T + SSS S
Sbjct: 356 SSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSS 390
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2
Query: 545 RRKEVVRTRSPHRHG 501
RRKE RTRS HRHG
Sbjct: 136 RRKEKERTRSNHRHG 150
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 356 STRRANW*KRWISGRRSLFSMS---RETRCVFSIDSAH*SSLRYTHTARCIARVDAGSVF 526
S R+N + I GRR++FS+S +E R +F++ SA + + ++ + + DA S
Sbjct: 194 SLERSNLKRLHIVGRRNIFSVSFTIKELRELFALSSAVFFAPSFNYSTKWMNETDA-SGL 252
Query: 527 ERP 535
+RP
Sbjct: 253 DRP 255
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 118 ENHKMPVETKISFSDGSSTDTLRKLSDDLSRKHLS 222
EN +PV +KI+ + DTL +++D LSR H+S
Sbjct: 118 ENENLPV-SKIA-EVTNELDTLVRINDQLSRNHIS 150
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 27.1 bits (57), Expect = 2.8
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 656 DRVIVSSSRGSKSWVILRFRKVLQ 727
D+++++S+ G SW+++R VLQ
Sbjct: 469 DKLLINSALGFDSWLVMRHGSVLQ 492
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 112 FFENHKMPV--ETKISFSDGSSTDTLRKLSDDLSRKHLSDHSVILTEDTEASLLVN 273
F +N + + E + D STD L+K D + HL + +VI ++T+ S+ VN
Sbjct: 599 FEQNQTLDILSENIVEIQD-KSTDPLQKSLDSSLKSHLPEATVI--QNTDGSVTVN 651
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 587 RSIVSSKMNASISTTTNGDIRTGDRVIVSSSRGSKSW 697
+++V + + + T+G IRTG V ++ G++ W
Sbjct: 1144 QTLVLNDLRGRVVIQTDGQIRTGRDVAIACLLGAEEW 1180
>SPCC1183.04c |pet127||mitochondrial membrane protein
Pet127|Schizosaccharomyces pombe|chr 3|||Manual
Length = 524
Score = 25.8 bits (54), Expect = 6.4
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -2
Query: 335 SKLRFSNISDLSRLRTAYPN--TFTNNEASVSSVNITLWSDRCFLDR 201
SK +F N SDLS+ PN FT S SSV+I+ + +D+
Sbjct: 146 SKWKFPNFSDLSKGFYISPNERNFTRLCRSASSVHISYQNGLYCIDK 192
>SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+]
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 25.4 bits (53), Expect = 8.5
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 278 LGRRYEAWTNRLYWRNAVCSRRVGWDSTRRANW*KRWISGRRSLFSMSRETRCV-FSIDS 454
+GR Y + ++ WR VC R ++S +A + + + F +SR + + +S+++
Sbjct: 15 MGRLYAEYISKAGWRVNVCDRPENYESI-QATYGNGGYTVLKDGFQVSRTSDYILYSVEA 73
Query: 455 AH 460
H
Sbjct: 74 EH 75
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 635 WSLWKLKHSSYC*QYC-EYFHLARGSAWDEPRRKEVVRTRSPHRH 504
++ WK+ S +C E++ ARG E RK+++R +RH
Sbjct: 995 YTTWKMNRCSD--NWCYEHYIQARGMRRAEDVRKQLIRLMDRYRH 1037
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,219,523
Number of Sequences: 5004
Number of extensions: 68966
Number of successful extensions: 233
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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