Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0509.Seq
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77663-3|CAB01212.1|  229|Caenorhabditis elegans Hypothetical pr...    75   7e-14
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr...    66   2e-11
Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical pr...    46   3e-05
AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical...    41   0.001
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>Z77663-3|CAB01212.1|  229|Caenorhabditis elegans Hypothetical
           protein F53F4.3 protein.
          Length = 229

 Score = 74.5 bits (175), Expect = 7e-14
 Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
 Frame = +3

Query: 255 SFIIGER--VWVGG--TKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCP 422
           + ++G R  V VG    + G++AY+G T+F  G W G+  DEP+GKNDGSVAGVRYF C 
Sbjct: 145 NIMVGNRCEVTVGAQMARRGEVAYVGATKFKEGVWVGVKYDEPVGKNDGSVAGVRYFDCD 204

Query: 423 EKRGVFSR 446
            K G F R
Sbjct: 205 PKYGGFVR 212


>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
           protein ZK593.5 protein.
          Length = 1326

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 29/62 (46%), Positives = 40/62 (64%)
 Frame = +3

Query: 255 SFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRG 434
           SF IG RV       G++ + G+TQFA G+W G++LD   GKN+G+V  V+YF+C    G
Sbjct: 2   SFEIGTRVKTSSGN-GRVVFCGQTQFAEGDWVGVILDTATGKNNGTVQNVQYFECEPNFG 60

Query: 435 VF 440
           VF
Sbjct: 61  VF 62


>Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical
           protein M01A8.2b protein.
          Length = 869

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 28/91 (30%), Positives = 42/91 (46%)
 Frame = +3

Query: 264 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 443
           IG  V V     G + Y+G      G + GI L EP GK+DG+  GV YF      G+F+
Sbjct: 21  IGRLVDVVNVGKGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFA 80

Query: 444 RLTRLTRVPFAIHTPHDASPVSMRGACSNDL 536
            + R+T     +  P   +P +      +D+
Sbjct: 81  PIFRVTLDAEELPKPPPPNPSNFSNGSWSDI 111


>Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical
           protein M01A8.2a protein.
          Length = 937

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 25/66 (37%), Positives = 34/66 (51%)
 Frame = +3

Query: 264 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 443
           IG  V V     G + Y+G      G + GI L EP GK+DG+  GV YF      G+F+
Sbjct: 21  IGRLVDVVNVGKGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFA 80

Query: 444 RLTRLT 461
            + R+T
Sbjct: 81  PIFRVT 86


>AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical
           protein K07H8.1 protein.
          Length = 493

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +3

Query: 264 IGERVWVGGTKPGQIAYIGETQ-FAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 434
           IG+RV +   +   + YIGE   +    W G+  D+P  GK+DG V G RYFQ     G
Sbjct: 3   IGQRVRIN-FEVATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNG 60


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 3   CITQVATTNYTPRYTHKLRFPNFKSRT 83
           C T  ATT  TP +  K +F  F  RT
Sbjct: 94  CFTNQATTTTTPTFRAKFKFTVFNQRT 120


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 3   CITQVATTNYTPRYTHKLRFPNFKSRT 83
           C T  ATT  TP +  K +F  F  RT
Sbjct: 101 CFTNQATTTTTPTFRAKFKFTVFNQRT 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,851,581
Number of Sequences: 27780
Number of extensions: 391202
Number of successful extensions: 1184
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)