Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0508.Seq
(560 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P0A9N7 Cluster: Pyruvate formate-lyase 1-activating enz... 176 3e-43
UniRef50_A0UVB5 Cluster: Pyruvate formate-lyase activating enzym... 88 2e-16
UniRef50_Q2ADU1 Cluster: Radical SAM; n=6; Bacteria|Rep: Radical... 87 2e-16
UniRef50_P0A443 Cluster: Pyruvate formate-lyase-activating enzym... 82 1e-14
UniRef50_Q1FMA2 Cluster: Pyruvate formate-lyase activating; n=1;... 78 1e-13
UniRef50_A6LHD1 Cluster: Pyruvate-formate lyase-activating enzym... 77 3e-13
UniRef50_Q1JDC1 Cluster: Pyruvate formate-lyase activating enzym... 74 3e-12
UniRef50_A6TQA0 Cluster: Pyruvate formate-lyase activating enzym... 73 3e-12
UniRef50_A7FYD4 Cluster: Glycyl-radical enzyme activating family... 72 1e-11
UniRef50_Q41F42 Cluster: Radical SAM; n=1; Exiguobacterium sibir... 71 1e-11
UniRef50_A5Z7S3 Cluster: Putative uncharacterized protein; n=1; ... 71 1e-11
UniRef50_A5CZJ9 Cluster: Pyruvate-formate lyase-activating enzym... 71 1e-11
UniRef50_Q8RGN0 Cluster: Pyruvate formate-lyase activating enzym... 71 2e-11
UniRef50_Q8DM95 Cluster: Pyruvate formate lyase activating enzym... 70 4e-11
UniRef50_A6E8I6 Cluster: Putative pyruvate formate-lyase 1 activ... 70 4e-11
UniRef50_A6CWD4 Cluster: Putative pyruvate formate-lyase 3 activ... 70 4e-11
UniRef50_Q46267 Cluster: Pyruvate formate-lyase-activating enzym... 69 7e-11
UniRef50_Q8G5Q4 Cluster: Pyruvate formate-lyase 1 activating enz... 67 2e-10
UniRef50_Q89YJ4 Cluster: Pyruvate formate-lyase activating enzym... 67 2e-10
UniRef50_A6TKU2 Cluster: Glycyl-radical enzyme activating protei... 67 2e-10
UniRef50_A6L094 Cluster: Pyruvate-formate lyase-activating enzym... 67 2e-10
UniRef50_Q3A4R5 Cluster: Glycerol dehydratase activating enzyme;... 66 4e-10
UniRef50_A1HSK1 Cluster: Pyruvate formate-lyase activating enzym... 66 4e-10
UniRef50_Q67T94 Cluster: Pyruvate formate lyase activating enzym... 66 7e-10
UniRef50_Q9RH16 Cluster: Pyruvate formate lyase activating enzym... 66 7e-10
UniRef50_Q0F2V4 Cluster: Pyruvate formate lyase activating enzym... 65 9e-10
UniRef50_Q896R1 Cluster: Pyruvate formate-lyase; n=5; Clostridiu... 65 1e-09
UniRef50_A6PR03 Cluster: Glycyl-radical enzyme activating protei... 64 2e-09
UniRef50_Q74BD9 Cluster: Pyruvate formate-lyase-activating enzym... 64 3e-09
UniRef50_A1RF32 Cluster: Glycyl-radical enzyme activating protei... 64 3e-09
UniRef50_O68575 Cluster: Pyruvate formate-lyase-activating enzym... 63 4e-09
UniRef50_A6PR24 Cluster: Pyruvate formate-lyase activating enzym... 63 5e-09
UniRef50_A6TKL6 Cluster: Glycyl-radical enzyme activating protei... 62 7e-09
UniRef50_Q0AY43 Cluster: Pyruvate formate lyase activating enzym... 62 9e-09
UniRef50_A4J0I5 Cluster: Pyruvate formate-lyase activating enzym... 61 2e-08
UniRef50_Q894T6 Cluster: Benzylsuccinate synthase activating enz... 61 2e-08
UniRef50_O28822 Cluster: Pyruvate formate-lyase 2 activating enz... 61 2e-08
UniRef50_A7CP89 Cluster: Glycyl-radical enzyme activating protei... 60 3e-08
UniRef50_P75992 Cluster: Uncharacterized protein ymgA; n=6; Esch... 60 3e-08
UniRef50_Q24T44 Cluster: Putative pyruvate-formate lyase-activat... 60 5e-08
UniRef50_Q6NJL9 Cluster: Putative oxidoreductase; n=1; Corynebac... 59 8e-08
UniRef50_A0KHW8 Cluster: Benzylsuccinate synthase activating enz... 59 8e-08
UniRef50_Q1A665 Cluster: Glycerol dehydratase activator; n=4; Cl... 58 1e-07
UniRef50_A6PKL2 Cluster: Glycyl-radical enzyme activating protei... 58 2e-07
UniRef50_Q30WU8 Cluster: Radical-activating enzyme; n=1; Desulfo... 57 2e-07
UniRef50_Q1J9H6 Cluster: Pyruvate formate-lyase activating enzym... 57 2e-07
UniRef50_A6CVH8 Cluster: Putative pyruvate formate-lyase activat... 57 2e-07
UniRef50_A1VC35 Cluster: Glycyl-radical enzyme activating protei... 57 3e-07
UniRef50_A6TPN2 Cluster: Glycyl-radical enzyme activating protei... 56 4e-07
UniRef50_A4E931 Cluster: Putative uncharacterized protein; n=2; ... 56 6e-07
UniRef50_Q5JFY5 Cluster: Pyruvate-formate lyase-activating enzym... 56 6e-07
UniRef50_Q18SE0 Cluster: Glycyl-radical enzyme activating protei... 55 1e-06
UniRef50_Q180C7 Cluster: Putative pyruvate formate-lyase 3 activ... 55 1e-06
UniRef50_A6PQB5 Cluster: Glycyl-radical enzyme activating protei... 54 2e-06
UniRef50_Q3A611 Cluster: Pyruvate-formate lyase-activating enzym... 54 2e-06
UniRef50_A7CT85 Cluster: (Formate-C-acetyltransferase)-activatin... 54 2e-06
UniRef50_A1IEK1 Cluster: Putative pyruvate formate-lyase 3 activ... 54 2e-06
UniRef50_Q6RFH6 Cluster: Pyruvate formate lyase activating enzym... 54 2e-06
UniRef50_Q64N17 Cluster: Formate acetyltransferase activating en... 54 3e-06
UniRef50_Q1ETW9 Cluster: Glycyl-radical enzyme activating; n=1; ... 54 3e-06
UniRef50_Q18AX7 Cluster: Glycerol dehydratase activator; n=2; Cl... 54 3e-06
UniRef50_Q8A3J8 Cluster: Putative pyruvate formate-lyase 3 activ... 53 4e-06
UniRef50_Q5P6A4 Cluster: Benzylsuccinate synthase activating enz... 53 4e-06
UniRef50_Q84F14 Cluster: HpdA protein; n=4; Clostridium|Rep: Hpd... 53 4e-06
UniRef50_Q1QPU4 Cluster: Pyruvate formate-lyase activating; n=1;... 53 4e-06
UniRef50_A6LRA5 Cluster: Glycyl-radical enzyme activating protei... 53 5e-06
UniRef50_Q0YKJ2 Cluster: Glycyl-radical enzyme activating; n=3; ... 52 7e-06
UniRef50_Q88UB1 Cluster: Formate acetyltransferase activating en... 52 9e-06
UniRef50_Q6AIS5 Cluster: Related to pyruvate formate-lyase activ... 52 9e-06
UniRef50_A6LD37 Cluster: Putative pyruvate formate-lyase 3 activ... 51 2e-05
UniRef50_A5N4Z5 Cluster: Predicted glycyl radical enzyme activat... 51 2e-05
UniRef50_A6LQ74 Cluster: Glycyl-radical enzyme activating protei... 50 3e-05
UniRef50_A1SHU9 Cluster: Radical SAM domain protein; n=1; Nocard... 50 3e-05
UniRef50_A3DFS5 Cluster: Radical SAM; n=1; Clostridium thermocel... 49 6e-05
UniRef50_A6PKN6 Cluster: Glycyl-radical enzyme activating protei... 48 1e-04
UniRef50_Q5IAC3 Cluster: PFL activating enzyme; n=2; Chlamydomon... 48 2e-04
UniRef50_Q250T6 Cluster: Pyruvate-formate lyase-activating enzym... 47 3e-04
UniRef50_A7FZD9 Cluster: Radical SAM domain protein; n=7; Clostr... 46 8e-04
UniRef50_A6NTG3 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_Q8A8W2 Cluster: Pyruvate formate-lyase activating enzym... 45 0.001
UniRef50_Q3ADQ7 Cluster: Putative pyruvate formate-lyase activat... 45 0.001
UniRef50_A6NRU9 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q8EEH4 Cluster: Radical activating enzyme; n=3; Gammapr... 45 0.001
UniRef50_P39409 Cluster: Uncharacterized protein yjjW; n=48; Gam... 45 0.001
UniRef50_Q1EUE2 Cluster: Radical SAM; n=2; Clostridiaceae|Rep: R... 44 0.002
UniRef50_P32675 Cluster: Pyruvate formate-lyase 2-activating enz... 44 0.002
UniRef50_A6G8C7 Cluster: Pyruvate formate-lyase-activating enzym... 43 0.006
UniRef50_A4SIR2 Cluster: Pyruvate formate lyase activating enzym... 43 0.006
UniRef50_Q0YLF3 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding:... 42 0.010
UniRef50_Q082I5 Cluster: Radical SAM domain protein; n=5; Shewan... 42 0.010
UniRef50_A6D1Q8 Cluster: Pyruvate formate lyase II activase; n=1... 42 0.010
UniRef50_A5ZSK4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_P75794 Cluster: Putative pyruvate formate-lyase 3-activ... 41 0.017
UniRef50_A6PMN6 Cluster: Radical SAM domain protein; n=1; Victiv... 41 0.023
UniRef50_Q9X1N8 Cluster: Pyruvate formate-lyase activating enzym... 38 0.21
UniRef50_Q8R8P0 Cluster: Pyruvate-formate lyase-activating enzym... 38 0.21
UniRef50_P44743 Cluster: Uncharacterized protein HI0520; n=13; P... 37 0.28
UniRef50_Q9V0N1 Cluster: Act-like pyruvate formate-lyase activat... 37 0.37
UniRef50_Q82LA4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.65
UniRef50_Q8U3Z7 Cluster: Co-factor modifying protein; n=2; Therm... 36 0.85
UniRef50_Q8TWE9 Cluster: Ferredoxin domain fused to pyruvate-for... 36 0.85
UniRef50_A2EUJ7 Cluster: Flavodoxin family protein; n=1; Trichom... 35 1.1
UniRef50_Q8ZSM8 Cluster: Pyruvate formate-lyase activating enzym... 35 1.1
UniRef50_Q8TWT0 Cluster: Pyruvate-formate lyase-activating enzym... 35 1.1
UniRef50_A1RR24 Cluster: Anaerobic ribonucleoside-triphosphate r... 35 1.1
UniRef50_A4RTI0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 1.5
UniRef50_A3DLF1 Cluster: Radical SAM domain protein; n=1; Staphy... 34 2.0
UniRef50_Q1IXN5 Cluster: Transposase Tn3; n=2; Bacteria|Rep: Tra... 34 2.6
UniRef50_Q58214 Cluster: Uncharacterized protein MJ0804; n=6; Me... 34 2.6
UniRef50_A6GMT0 Cluster: YapH protein; n=1; Limnobacter sp. MED1... 33 3.4
UniRef50_A3CVT6 Cluster: Anaerobic ribonucleoside-triphosphate r... 33 3.4
UniRef50_A0DM33 Cluster: Chromosome undetermined scaffold_56, wh... 33 4.6
UniRef50_UPI0000F2E189 Cluster: PREDICTED: hypothetical protein;... 33 6.0
UniRef50_A1IF25 Cluster: Radical SAM precursor; n=1; Candidatus ... 33 6.0
UniRef50_Q2GM07 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q58624 Cluster: Uncharacterized protein MJ1227; n=6; Me... 33 6.0
UniRef50_Q4RZ28 Cluster: Chromosome 8 SCAF14972, whole genome sh... 32 8.0
UniRef50_Q1IMN2 Cluster: Putative uncharacterized protein precur... 32 8.0
UniRef50_A6ALD1 Cluster: Benzylsuccinate synthase activating enz... 32 8.0
UniRef50_Q01C13 Cluster: Homology to unknown gene; n=2; Ostreoco... 32 8.0
UniRef50_A0MEP5 Cluster: Putative uncharacterized protein; n=2; ... 32 8.0
UniRef50_Q2NEQ2 Cluster: Predicted glycyl radical activating enz... 32 8.0
>UniRef50_P0A9N7 Cluster: Pyruvate formate-lyase 1-activating
enzyme; n=116; Bacteria|Rep: Pyruvate formate-lyase
1-activating enzyme - Shigella flexneri
Length = 246
Score = 176 bits (428), Expect = 3e-43
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV
Sbjct: 64 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 123
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DLVMLDL QMNDEIHQNLVGVSN
Sbjct: 124 TDLVMLDLKQMNDEIHQNLVGVSN 147
Score = 127 bits (307), Expect = 2e-28
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -2
Query: 253 RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL
Sbjct: 149 RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 205
Score = 33.5 bits (73), Expect = 3.4
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1
Query: 560 HGGKEVTVEDLMKE 519
HGGKEVTVEDLMKE
Sbjct: 46 HGGKEVTVEDLMKE 59
>UniRef50_A0UVB5 Cluster: Pyruvate formate-lyase activating enzyme;
n=1; Clostridium cellulolyticum H10|Rep: Pyruvate
formate-lyase activating enzyme - Clostridium
cellulolyticum H10
Length = 240
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/84 (48%), Positives = 59/84 (70%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R+F++AS GG+T SGGE ++Q EFV++ F+ C++ GIHT +DT+G+V D + + LE
Sbjct: 64 RNFIDASHGGITVSGGEPLIQHEFVKELFKLCREAGIHTAVDTSGYVNVED--VKDTLEY 121
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DLV+LDL Q N + H L GV N
Sbjct: 122 TDLVLLDLKQANAQKHLELTGVEN 145
Score = 52.8 bits (121), Expect = 5e-06
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = -2
Query: 241 FAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH 89
F YL VWIRYV++PG++D ++ + + N+EKIE+LPYH
Sbjct: 151 FTTYLGEIGKPVWIRYVLIPGYTDGEEDLLAAYNYLKGFKNIEKIEVLPYH 201
>UniRef50_Q2ADU1 Cluster: Radical SAM; n=6; Bacteria|Rep: Radical
SAM - Halothermothrix orenii H 168
Length = 247
Score = 87.4 bits (207), Expect = 2e-16
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
+M++SGGGVT SGGE LQ FVR+ +ACK++GIHT LDT+G+V V +L D
Sbjct: 65 YMDSSGGGVTISGGEPTLQPGFVRELLKACKEQGIHTALDTSGYVT--PEVFSSILPYID 122
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
LV+LD+ + +E H++L GVSN
Sbjct: 123 LVLLDIKHIKEEKHRDLTGVSN 144
Score = 56.8 bits (131), Expect = 3e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = -2
Query: 253 RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
RTLE L + WIR+V+VPG +D+ D ++L + ++ +E++ELLPYH L
Sbjct: 146 RTLELISLLEKEKQPYWIRHVIVPGITDNRDDLNQLASYLSNLNGLERVELLPYHRL 202
>UniRef50_P0A443 Cluster: Pyruvate formate-lyase-activating enzyme;
n=29; Firmicutes|Rep: Pyruvate formate-lyase-activating
enzyme - Listeria innocua
Length = 248
Score = 81.8 bits (193), Expect = 1e-14
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Frame = -3
Query: 549 RSYR*RFDEGSGDLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGF 370
RS + FDE + F +ASGGGVT SGGE +LQ +F+ ++F CK G+HT +D+ G
Sbjct: 52 RSAQDVFDEAI-KYKEFWDASGGGVTVSGGEPLLQVDFLIEFFTLCKAAGVHTTIDSCGG 110
Query: 369 VRRYDP----VIDELLEVPDLVMLDL*QMNDEIHQNLVGVSN 256
DP +D L+EV DL++LD+ Q+N E H L SN
Sbjct: 111 CFTRDPEFIEKLDRLMEVTDLILLDIKQINPEKHLKLTTKSN 152
Score = 56.8 bits (131), Expect = 3e-07
Identities = 21/55 (38%), Positives = 39/55 (70%)
Frame = -2
Query: 247 LEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
++FA YL +K +WIR+V++P +DD + +L EF + + NV+++++LPYH +
Sbjct: 156 IDFAHYLRDKEQPIWIRHVLIPTKTDDPEDLTKLHEFIQTLPNVKQVDVLPYHTM 210
>UniRef50_Q1FMA2 Cluster: Pyruvate formate-lyase activating; n=1;
Clostridium phytofermentans ISDg|Rep: Pyruvate
formate-lyase activating - Clostridium phytofermentans
ISDg
Length = 250
Score = 78.2 bits (184), Expect = 1e-13
Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Frame = -3
Query: 486 GGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDE----LLEVPDL 319
GGG+T +GGE +LQ EFV + F KK+GIHTC+DT+G R P E LL+V DL
Sbjct: 67 GGGITVTGGEPLLQLEFVTELFEEAKKKGIHTCIDTSGITFR--PADKEKYLPLLKVTDL 124
Query: 318 VMLDL*QMNDEIHQNLVGVSN 256
VMLD+ QMN H+ L G N
Sbjct: 125 VMLDIKQMNAIKHKELTGHDN 145
Score = 62.9 bits (146), Expect = 5e-09
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = -2
Query: 247 LEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
LEFA++L+N+ V +WIR+V VPG +DD +LGEF ++ +++ +++LPYH +
Sbjct: 149 LEFARFLSNQKVTLWIRFVAVPGITDDSKELVQLGEFLAELTSLKALDVLPYHSM 203
>UniRef50_A6LHD1 Cluster: Pyruvate-formate lyase-activating enzyme;
n=2; Parabacteroides|Rep: Pyruvate-formate
lyase-activating enzyme - Parabacteroides distasonis
(strain ATCC 8503 / DSM 20701 / NCTC11152)
Length = 244
Score = 77.0 bits (181), Expect = 3e-13
Identities = 37/83 (44%), Positives = 57/83 (68%)
Frame = -3
Query: 510 LRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLE 331
LR+ + GGVT +GGE +LQ EF++++FR C+++G+HT LDT+GFV E+L+
Sbjct: 62 LRYKSFIARGGVTVTGGEPLLQPEFLKEFFRLCQEQGLHTALDTSGFV--CTSKAWEVLD 119
Query: 330 VPDLVMLDL*QMNDEIHQNLVGV 262
DLV+LD+ +N ++H L GV
Sbjct: 120 YADLVLLDIKTLNPDLHPLLAGV 142
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = -2
Query: 259 QPRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
Q TL F L + + WIR+V+VPG++D+D+ L + V K+ELLPYH +
Sbjct: 144 QDNTLLFLDELERRGIDTWIRHVIVPGYTDNDEWLEALARYVSSYKVVRKVELLPYHTM 202
>UniRef50_Q1JDC1 Cluster: Pyruvate formate-lyase activating enzyme;
n=27; Streptococcaceae|Rep: Pyruvate formate-lyase
activating enzyme - Streptococcus pyogenes serotype M12
(strain MGAS2096)
Length = 287
Score = 73.7 bits (173), Expect = 3e-12
Identities = 30/55 (54%), Positives = 43/55 (78%)
Frame = -2
Query: 247 LEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
L+FA+YL++K + VWIR+V+VPG +D DD RLGEF + + NV+K E+LPYH +
Sbjct: 186 LQFARYLSDKQIPVWIRHVLVPGLTDIDDHLTRLGEFVKTLKNVDKFEVLPYHTM 240
Score = 72.1 bits (169), Expect = 8e-12
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRR----YDPVIDE 340
+HF GG +T SGGEA+LQ +F+ F KK GIHT LDT GF R Y V+D
Sbjct: 96 KHFWGKKGG-ITVSGGEAMLQIDFITALFIEAKKLGIHTTLDTCGFTYRPTPEYHQVLDN 154
Query: 339 LLEVPDLVMLDL*QMNDEIHQ 277
LL V DL++LDL +++++ H+
Sbjct: 155 LLAVTDLILLDLKEIDEKQHK 175
>UniRef50_A6TQA0 Cluster: Pyruvate formate-lyase activating enzyme;
n=1; Alkaliphilus metalliredigens QYMF|Rep: Pyruvate
formate-lyase activating enzyme - Alkaliphilus
metalliredigens QYMF
Length = 248
Score = 73.3 bits (172), Expect = 3e-12
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
FM +SGGGVT SGGE LQ EF+ KK +HT +DT+GFV + ++ ++L D
Sbjct: 66 FMVSSGGGVTISGGEPTLQMEFLTALLLEIKKLNLHTAIDTSGFV--HLDLMKQILPYVD 123
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
LV+LDL ++ + H NL GVSN
Sbjct: 124 LVLLDLKHIDPQKHLNLTGVSN 145
Score = 66.5 bits (155), Expect = 4e-10
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = -2
Query: 253 RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
+ L FA+YL++ + +W+R+VVVP +D ++ HRL +F + VE+I+LLPYH +
Sbjct: 147 KILSFAQYLSDNEISIWMRHVVVPSLTDQEEDVHRLAQFATSLKTVERIDLLPYHSM 203
>UniRef50_A7FYD4 Cluster: Glycyl-radical enzyme activating family
protein; n=5; Clostridiaceae|Rep: Glycyl-radical enzyme
activating family protein - Clostridium botulinum
(strain ATCC 19397 / Type A)
Length = 300
Score = 71.7 bits (168), Expect = 1e-11
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F S GGVT SGGE +L A+F+ CK GIHT +DT+G+V +D +++ + D
Sbjct: 121 FYEQSSGGVTFSGGEPMLHADFINGILEECKVRGIHTTIDTSGYV-SWDK-FEKVRDKVD 178
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
L + DL MN+EIH+ GV N
Sbjct: 179 LFLYDLKSMNNEIHKKYTGVEN 200
>UniRef50_Q41F42 Cluster: Radical SAM; n=1; Exiguobacterium
sibiricum 255-15|Rep: Radical SAM - Exiguobacterium
sibiricum 255-15
Length = 242
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = -2
Query: 250 TLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
TL FAK LA +N+ VWIR+V+VPG + + + GEF R +GNVE+IE+LPYH+L
Sbjct: 149 TLAFAKRLAERNIPVWIRHVLVPGLTMTETFLRQTGEFIRTLGNVERIEVLPYHQL 204
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/90 (41%), Positives = 53/90 (58%)
Frame = -3
Query: 525 EGSGDLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVI 346
E + R F A+GGG+T SGGE + Q EF+ R K++G+HT +DT G V I
Sbjct: 59 EEAESYRSFFEATGGGITFSGGEPLAQPEFLEAALREAKQKGMHTVIDTAGSV--VPKNI 116
Query: 345 DELLEVPDLVMLDL*QMNDEIHQNLVGVSN 256
D +L+ DLV+LD+ ++D + L G SN
Sbjct: 117 DRILDYTDLVLLDIKHIDDATCRILTGRSN 146
>UniRef50_A5Z7S3 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 255
Score = 71.3 bits (167), Expect = 1e-11
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDP-----VIDELLEVPDL 319
GG+TA+GGE ++Q +F+ + F K GIHTCLDT+G R D +D+LLEV DL
Sbjct: 69 GGITATGGEPMVQIDFLTELFTEAHKRGIHTCLDTSGVTFRPDDPENLMKVDKLLEVTDL 128
Query: 318 VMLDL*QMNDEIHQNL 271
VMLD+ +N + H L
Sbjct: 129 VMLDIKHINPQEHLKL 144
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = -2
Query: 247 LEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
L FAKYL K +++WIR+VVVP + + + + LG F + V+ +++LPYH++
Sbjct: 153 LAFAKYLDKKGIQMWIRHVVVPHITLNKEYLYELGLFIGKLKMVKALDILPYHDM 207
>UniRef50_A5CZJ9 Cluster: Pyruvate-formate lyase-activating enzyme;
n=1; Pelotomaculum thermopropionicum SI|Rep:
Pyruvate-formate lyase-activating enzyme - Pelotomaculum
thermopropionicum SI
Length = 303
Score = 71.3 bits (167), Expect = 1e-11
Identities = 36/83 (43%), Positives = 47/83 (56%)
Frame = -3
Query: 504 HFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVP 325
HF SGGGVT SGGEA+ Q F + C + GIHTCLDT+G+ D + +LE
Sbjct: 122 HFYQDSGGGVTISGGEALFQPNFTEALLKECHELGIHTCLDTSGYGSTSD--LKRILEYT 179
Query: 324 DLVMLDL*QMNDEIHQNLVGVSN 256
DLV D+ ++ H+ G SN
Sbjct: 180 DLVYYDIKLVDPFAHKEYTGQSN 202
>UniRef50_Q8RGN0 Cluster: Pyruvate formate-lyase activating enzyme;
n=3; Fusobacterium nucleatum|Rep: Pyruvate formate-lyase
activating enzyme - Fusobacterium nucleatum subsp.
nucleatum
Length = 243
Score = 70.5 bits (165), Expect = 2e-11
Identities = 31/74 (41%), Positives = 52/74 (70%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL 304
GG+T SGGE +LQ+ FV + F+ CK+ GIHT LDT+G++ ++ ++LE DLV+LD+
Sbjct: 68 GGITISGGEPLLQSSFVLEVFKLCKENGIHTALDTSGYI--FNEQAKKVLEYTDLVLLDI 125
Query: 303 *QMNDEIHQNLVGV 262
++ ++++ L V
Sbjct: 126 KHIDKDMYKKLTSV 139
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -2
Query: 250 TLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
TL F KYL N WIRYV+VPG++DD + +F V+++++LP+H++
Sbjct: 144 TLNFIKYLQEINKPTWIRYVLVPGYTDDIKDLNDWAKFVSQFDIVKRVDILPFHQM 199
>UniRef50_Q8DM95 Cluster: Pyruvate formate lyase activating enzyme;
n=2; Chroococcales|Rep: Pyruvate formate lyase
activating enzyme - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 254
Score = 69.7 bits (163), Expect = 4e-11
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = -3
Query: 528 DEGSGDLRHFMN-ASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDP 352
DE D++H+ + GGVTASGGE ++Q EFVR+ F C + G+HT LDT+G+V
Sbjct: 67 DELIADIQHYQSYLRQGGVTASGGEPLMQPEFVREIFERCHELGLHTALDTSGYVLL--E 124
Query: 351 VIDELLEVPDLVMLDL*QMNDEIHQNLVGVS 259
++ V DLV+LD+ + ++ + GV+
Sbjct: 125 AAKPVVAVTDLVLLDIKSFLPQTYRRVTGVT 155
Score = 63.7 bits (148), Expect = 3e-09
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = -2
Query: 250 TLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
TLE AKYL + WIR+V+VPG +DD ++ L +F ++ NVEK+E+LP+H++
Sbjct: 159 TLELAKYLDEIHKPTWIRFVLVPGLTDDPENMRGLAQFVANLRNVEKVEVLPFHKM 214
>UniRef50_A6E8I6 Cluster: Putative pyruvate formate-lyase 1
activating enzyme; n=1; Pedobacter sp. BAL39|Rep:
Putative pyruvate formate-lyase 1 activating enzyme -
Pedobacter sp. BAL39
Length = 260
Score = 69.7 bits (163), Expect = 4e-11
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL 304
GGVT SGGE +LQ + +F+ + GI+TCLD+NG R P + EL+E DL++LD+
Sbjct: 87 GGVTVSGGEPLLQRSKLTAFFKKLHEHGINTCLDSNG--RMNTPEVHELMEHTDLLLLDV 144
Query: 303 *QMNDEIHQNLVGVSN 256
+N+E H L G SN
Sbjct: 145 KHINEEWHLRLTGQSN 160
Score = 49.2 bits (112), Expect = 6e-05
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -2
Query: 250 TLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
+L A Y + K+W+RYV+VPGW+D + + VE++E++P+H+L
Sbjct: 163 SLGLAAYRESIGRKMWLRYVLVPGWTDQPEYLKAWAQHFTSYKTVERVEIIPFHQL 218
>UniRef50_A6CWD4 Cluster: Putative pyruvate formate-lyase 3
activating enzyme; n=1; Vibrio shilonii AK1|Rep:
Putative pyruvate formate-lyase 3 activating enzyme -
Vibrio shilonii AK1
Length = 248
Score = 69.7 bits (163), Expect = 4e-11
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGGVT SGGE +LQ+ FV + F+ CK+E IHTCL+++ F I++LL D
Sbjct: 54 FYQRSGGGVTVSGGEPLLQSNFVLELFKLCKQENIHTCLESSFFANWNR--IEKLLPYTD 111
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
L + D+ ++ + H+ GV N
Sbjct: 112 LFISDIKLLDSQRHKAHTGVDN 133
>UniRef50_Q46267 Cluster: Pyruvate formate-lyase-activating enzyme;
n=9; Clostridium|Rep: Pyruvate formate-lyase-activating
enzyme - Clostridium pasteurianum
Length = 238
Score = 68.9 bits (161), Expect = 7e-11
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
+ + SGGGVT SGGE +LQ EF+ D + CK++GIHT +DT G+ Y +E+L+ D
Sbjct: 65 YFDRSGGGVTFSGGEVLLQPEFLIDILKLCKEQGIHTAIDTAGY--GYGN-YEEILKHTD 121
Query: 321 LVMLDL*QMNDEIHQNLVG 265
LV+LD+ ++D+ ++ + G
Sbjct: 122 LVLLDIKHVDDDGYKCITG 140
Score = 59.7 bits (138), Expect = 5e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = -2
Query: 244 EFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
+F K + N VKVWIR+V+VP +D ++ +L +++ NVEK+ELLPYH L
Sbjct: 148 DFLKAVENIGVKVWIRHVIVPTLTDSKENIRKLANIIKNIRNVEKVELLPYHTL 201
>UniRef50_Q8G5Q4 Cluster: Pyruvate formate-lyase 1 activating
enzyme; n=5; Actinobacteridae|Rep: Pyruvate
formate-lyase 1 activating enzyme - Bifidobacterium
longum
Length = 293
Score = 67.3 bits (157), Expect = 2e-10
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
+ A+ GG+T SGGE+++Q FV F A K+ G+HTCLDT+GF+ DE+LE
Sbjct: 113 KDLFKATHGGITFSGGESMMQPAFVSRVFHAAKEMGVHTCLDTSGFLN--TNYTDEMLED 170
Query: 327 PDLVMLDL*QMNDEIHQNLVG 265
DL +LD+ ++E + + G
Sbjct: 171 IDLCLLDVKSGDEETYHKVTG 191
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = -2
Query: 298 DERRDPPKSGWSFQPRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGN 119
DE +G + QP T++F + LA K+W+R+V+VPG +D +++ + + G+
Sbjct: 182 DEETYHKVTGGTLQP-TIDFGQRLAKAGKKIWVRFVLVPGLTDSEENVENVAKICESFGD 240
Query: 118 -VEKIELLPYHEL 83
VE I++L +H+L
Sbjct: 241 AVEHIDVLGFHQL 253
>UniRef50_Q89YJ4 Cluster: Pyruvate formate-lyase activating enzyme;
n=6; Bacteroides|Rep: Pyruvate formate-lyase activating
enzyme - Bacteroides thetaiotaomicron
Length = 242
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL 304
GG+T SGGE QA+ + R K+ GIH CLD+NG + D ++EL ++ DLV+LD+
Sbjct: 69 GGITFSGGEPTFQAKALVPLVRELKERGIHVCLDSNGGLWNED--VEELFKLTDLVLLDI 126
Query: 303 *QMNDEIHQNLVGVSN 256
+ N HQ L G SN
Sbjct: 127 KEFNPNRHQTLTGRSN 142
Score = 52.0 bits (119), Expect = 9e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = -2
Query: 253 RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
+T+ A +L + W+RYV+VPG+SD ++ LGE ++++E+LPYH L
Sbjct: 144 QTIRTAAWLEEQGKPFWLRYVLVPGYSDFEEDIRALGEALGKYKMIQRVEILPYHTL 200
>UniRef50_A6TKU2 Cluster: Glycyl-radical enzyme activating protein
family; n=2; Clostridiales|Rep: Glycyl-radical enzyme
activating protein family - Alkaliphilus metalliredigens
QYMF
Length = 297
Score = 67.3 bits (157), Expect = 2e-10
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R F S GGVT SGGE + Q EF+ + R C ++GIH +DT+GF ++++ EV
Sbjct: 115 RIFFEQSKGGVTFSGGEPLSQGEFLYELLRVCGQKGIHRGVDTSGFSSWQQ--LEKIAEV 172
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DL + DL +N++ H GVSN
Sbjct: 173 TDLFLYDLKHINNDKHIEYTGVSN 196
>UniRef50_A6L094 Cluster: Pyruvate-formate lyase-activating enzyme;
n=3; Bacteroidales|Rep: Pyruvate-formate
lyase-activating enzyme - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 302
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
FM+ SGGGVT GGE +L EF+ D + C ++GIH +DT R+ +DE++ +
Sbjct: 119 FMDQSGGGVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARK--ETVDEVMRNCE 176
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
L+++DL M+ +HQ V N
Sbjct: 177 LLLIDLKSMDSTVHQTFCDVPN 198
>UniRef50_Q3A4R5 Cluster: Glycerol dehydratase activating enzyme;
n=1; Pelobacter carbinolicus DSM 2380|Rep: Glycerol
dehydratase activating enzyme - Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1)
Length = 322
Score = 66.5 bits (155), Expect = 4e-10
Identities = 36/84 (42%), Positives = 48/84 (57%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R F S GGVT SGGE Q EF++ +A + GIHT ++T+ FV +LE
Sbjct: 140 RKFYEQSNGGVTFSGGEPTAQPEFLKAALQAIQARGIHTAIETSSFVAW--ETFASILEN 197
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DLV+ D+ M+D H+ L GVSN
Sbjct: 198 VDLVLTDIKHMDDAEHKRLTGVSN 221
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = -2
Query: 247 LEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
LE + ++ + + IR ++PG++D D + EF + NV+ +++LPYH L
Sbjct: 225 LENIRNISRLGIPIKIRLPLIPGFNDSDRNLAATAEFVEQLSNVQSLDILPYHRL 279
>UniRef50_A1HSK1 Cluster: Pyruvate formate-lyase activating enzyme;
n=1; Thermosinus carboxydivorans Nor1|Rep: Pyruvate
formate-lyase activating enzyme - Thermosinus
carboxydivorans Nor1
Length = 252
Score = 66.5 bits (155), Expect = 4e-10
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGF 370
F SGGGVT SGGE +LQA+F+ FRAC+K+GIHT LDT GF
Sbjct: 72 FYRFSGGGVTVSGGEPLLQADFIAALFRACRKQGIHTTLDTAGF 115
Score = 37.9 bits (84), Expect = 0.16
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2
Query: 229 LANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
+A V V +RYVV+PG +D L + + +ELLPYH L
Sbjct: 160 VATARVPVTVRYVVIPGLTDGAADLTALAALLHGLPRLVAVELLPYHTL 208
>UniRef50_Q67T94 Cluster: Pyruvate formate lyase activating enzyme;
n=4; Bacteria|Rep: Pyruvate formate lyase activating
enzyme - Symbiobacterium thermophilum
Length = 255
Score = 65.7 bits (153), Expect = 7e-10
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
+M SGGGVT SGGE +LQ +FV D F C++ IHT LDT+GF +LE D
Sbjct: 78 YMKFSGGGVTVSGGEPLLQPDFVADLFAECRRLFIHTALDTSGFAP--PERARRVLEQTD 135
Query: 321 LVMLDL*QMNDEIHQNLVGV 262
L++LD+ + H+ L GV
Sbjct: 136 LLLLDIKHPDLLRHKALTGV 155
Score = 59.7 bits (138), Expect = 5e-08
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = -2
Query: 256 PRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
PRT A+ A + +WIRYVVVPGW+D L + + + VEK+ELLPYH L
Sbjct: 160 PRTT--ARLAAAMGIPIWIRYVVVPGWTDSPADVEALADLVQTLPTVEKVELLPYHLL 215
>UniRef50_Q9RH16 Cluster: Pyruvate formate lyase activating enzyme;
n=9; Proteobacteria|Rep: Pyruvate formate lyase
activating enzyme - Zymomonas mobilis
Length = 270
Score = 65.7 bits (153), Expect = 7e-10
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F+ +GGG+T SGGE ++Q EF +A K G+HT +DT GF+ D LL D
Sbjct: 93 FLKRAGGGITISGGEPLVQPEFTGALLKAAKYLGLHTAIDTAGFLGA--QADDALLSNTD 150
Query: 321 LVMLDL*QMNDEIHQNLVGV 262
LV+LD+ ND+ ++ L GV
Sbjct: 151 LVLLDIKAFNDKRYKALTGV 170
Score = 63.3 bits (147), Expect = 4e-09
Identities = 28/72 (38%), Positives = 47/72 (65%)
Frame = -2
Query: 298 DERRDPPKSGWSFQPRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGN 119
+++R +G QP TL FAK LA VW+RYV+VPG +D+ + L +F +GN
Sbjct: 160 NDKRYKALTGVELQP-TLAFAKRLAALKKPVWLRYVLVPGLTDNFNEIANLADFAATLGN 218
Query: 118 VEKIELLPYHEL 83
+E++++LP+H++
Sbjct: 219 IERVDVLPFHKM 230
>UniRef50_Q0F2V4 Cluster: Pyruvate formate lyase activating enzyme;
n=1; Mariprofundus ferrooxydans PV-1|Rep: Pyruvate
formate lyase activating enzyme - Mariprofundus
ferrooxydans PV-1
Length = 264
Score = 65.3 bits (152), Expect = 9e-10
Identities = 27/59 (45%), Positives = 43/59 (72%)
Frame = -2
Query: 259 QPRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
QP TL+FA+ L++ K+WIRYV+VPG++DD D L +F + VE++E+LP+H++
Sbjct: 167 QP-TLDFARRLSDMGKKMWIRYVLVPGYTDDFDDVEALADFVLTLDGVERVEVLPFHKM 224
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKE-GIHTCLDTNGFVRRYDPVIDELLEVPDLVMLD 307
GG+T SGGE ++QA+FVR+ F K + +HT LDT GF+ + + DE + DLV+LD
Sbjct: 92 GGLTISGGEPLMQADFVREVFYLAKHDYHLHTALDTQGFLAAH--LEDEWFDDIDLVLLD 149
Query: 306 L 304
+
Sbjct: 150 I 150
>UniRef50_Q896R1 Cluster: Pyruvate formate-lyase; n=5;
Clostridium|Rep: Pyruvate formate-lyase - Clostridium
tetani
Length = 310
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/86 (36%), Positives = 49/86 (56%)
Frame = -3
Query: 513 DLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELL 334
D HF N S GG+T SGGE ++Q EF + +ACK G HT ++T + + +I+ ++
Sbjct: 125 DAIHFRN-SNGGITLSGGEPLMQLEFTLELLKACKTMGWHTAMETTAYTNK--DIINNVM 181
Query: 333 EVPDLVMLDL*QMNDEIHQNLVGVSN 256
DL +LD+ +N H+ +G N
Sbjct: 182 PYLDLALLDIKILNSSKHKEYIGGDN 207
Score = 38.7 bits (86), Expect = 0.092
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = -2
Query: 247 LEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
LE AK + V IR V+P ++ D +S + F +++ V++I LLPYH+L
Sbjct: 211 LENAKEIVKLVKDVIIRVPVIPEFNADKESIADIAMFAKNLETVKEIHLLPYHKL 265
>UniRef50_A6PR03 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Glycyl-radical enzyme activating protein family -
Victivallis vadensis ATCC BAA-548
Length = 301
Score = 64.1 bits (149), Expect = 2e-09
Identities = 37/84 (44%), Positives = 46/84 (54%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R F SGGGVT SGGE +LQ F R +F K G+H LDT+G ++ LL
Sbjct: 121 RDFQRRSGGGVTVSGGEPLLQTGFCRAFFMELGKLGVHRALDTSG--EAPWETLELLLAE 178
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DLV+ D Q +D H+ GVSN
Sbjct: 179 TDLVLYDFKQADDAKHRAGTGVSN 202
>UniRef50_Q74BD9 Cluster: Pyruvate formate-lyase-activating enzyme,
putative; n=2; Geobacter|Rep: Pyruvate
formate-lyase-activating enzyme, putative - Geobacter
sulfurreducens
Length = 298
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R F SGGG T SGGE + Q F++ C++ GI T +DT GF R D + E+
Sbjct: 116 RIFYEESGGGATFSGGEPLCQPGFLKALLAGCRERGIRTAVDTGGFAPR-DQFL-EVATA 173
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DL++ DL M+ E H+ +VG+ N
Sbjct: 174 ADLILYDLKLMDAERHRAVVGLDN 197
Score = 33.9 bits (74), Expect = 2.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 208 VWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH 89
+WIR ++PG +DD + V ++ LLPYH
Sbjct: 214 IWIRIPIIPGVNDDRANLEATAALAARTPGVRQVNLLPYH 253
>UniRef50_A1RF32 Cluster: Glycyl-radical enzyme activating protein
family; n=8; Bacteria|Rep: Glycyl-radical enzyme
activating protein family - Shewanella sp. (strain
W3-18-1)
Length = 306
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/91 (37%), Positives = 49/91 (53%)
Frame = -3
Query: 528 DEGSGDLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPV 349
DE D H+ SGGG+T SGGEA+ Q F ACK G HT ++T G R V
Sbjct: 118 DELRKDETHYRR-SGGGITLSGGEALAQPAFAAALLAACKARGWHTAMETTGIASR--AV 174
Query: 348 IDELLEVPDLVMLDL*QMNDEIHQNLVGVSN 256
+++++ + D+V+LD+ E H+ G N
Sbjct: 175 LEKVIPLLDIVLLDIKTFYSERHKEFTGHPN 205
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = -2
Query: 220 KNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH 89
KNV V R V+PG++DD+ S + F M NV ++ LLPYH
Sbjct: 220 KNVAV--RIPVIPGFNDDEQSIEAIARFVTHMKNVSRLHLLPYH 261
>UniRef50_O68575 Cluster: Pyruvate formate-lyase-activating enzyme;
n=38; Firmicutes|Rep: Pyruvate formate-lyase-activating
enzyme - Streptococcus mutans
Length = 263
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDP----VIDELLEVPDLV 316
GG+T SGGEA LQ +F+ F K++GIHT LDT R P ++L+ V DLV
Sbjct: 80 GGITVSGGEATLQMDFLIALFSLAKEKGIHTTLDTCALTFRNTPKYLEKYEKLMAVTDLV 139
Query: 315 MLDL*QMNDEIHQNLVGVSN 256
+LD+ ++N + H+ + G SN
Sbjct: 140 LLDIKEINPDQHKIVTGHSN 159
Score = 59.7 bits (138), Expect = 5e-08
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = -2
Query: 247 LEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
L A+YL++ VWIR+V+VPG +D D+ +LGE+ + + NV++ E+LPYH +
Sbjct: 163 LACARYLSDIGKPVWIRHVLVPGLTDRDEDLIKLGEYVKTLKNVQRFEILPYHTM 217
>UniRef50_A6PR24 Cluster: Pyruvate formate-lyase activating enzyme;
n=1; Victivallis vadensis ATCC BAA-548|Rep: Pyruvate
formate-lyase activating enzyme - Victivallis vadensis
ATCC BAA-548
Length = 237
Score = 62.9 bits (146), Expect = 5e-09
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFV--RRYDPVIDELL 334
R+F+ + GGVT SGGE ++Q EF RD C + G HT LDT G V R PVID
Sbjct: 65 RNFIRS--GGVTLSGGEPLMQPEFARDILERCARAGFHTALDTAGSVPLERSRPVIDR-- 120
Query: 333 EVPDLVMLDL*QMNDEIHQNLVGVSN 256
DL++LD+ +N + + L G N
Sbjct: 121 --ADLLLLDIKALNPALCRELTGRDN 144
Score = 40.7 bits (91), Expect = 0.023
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -2
Query: 250 TLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
TL Y VWIR+V+VPG++ + L F + + +I+LLPYH+L
Sbjct: 147 TLATLDYCEETARPVWIRHVLVPGFTLLRERLEELAAFLKPYRCIRRIDLLPYHKL 202
>UniRef50_A6TKL6 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Glycyl-radical enzyme activating protein family -
Alkaliphilus metalliredigens QYMF
Length = 258
Score = 62.5 bits (145), Expect = 7e-09
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F N SGGG+T SGGE ++Q EF + K++ IHT ++T+G+ +++D ++ ++E D
Sbjct: 79 FYNRSGGGMTLSGGEPLMQPEFASALVKEAKRQDIHTAIETSGY-QQWD-LLWSVIENID 136
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
V+ D+ M+ + H ++G SN
Sbjct: 137 TVLFDIKTMDAQQHLEVMGTSN 158
Score = 41.5 bits (93), Expect = 0.013
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = -2
Query: 247 LEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
LE AK +A N ++ +R +VPG++D + F +++G ++++ LLPYH+L
Sbjct: 162 LENAKRIAKMNKEIILRIPIVPGYNDSWSNMVETVNFAKEIG-IKEMHLLPYHQL 215
>UniRef50_Q0AY43 Cluster: Pyruvate formate lyase activating enzyme;
n=1; Syntrophomonas wolfei subsp. wolfei str.
Goettingen|Rep: Pyruvate formate lyase activating enzyme
- Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 246
Score = 62.1 bits (144), Expect = 9e-09
Identities = 31/88 (35%), Positives = 55/88 (62%)
Frame = -3
Query: 492 ASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVM 313
ASGGG+T SGGE +L +F++ F C++E I T +DT+ +V+ + ++ + +LV+
Sbjct: 69 ASGGGLTFSGGEPLLHDDFIKAVFLLCREENISTAIDTSLYVK--PAALLNVMPLTNLVL 126
Query: 312 LDL*QMNDEIHQNLVGVSNPARWSSLNI 229
D+ +N+E + L G+SN S+L +
Sbjct: 127 ADIKHINEEKSRCLTGMSNSLNLSNLKL 154
Score = 54.0 bits (124), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -2
Query: 235 KYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
K + + ++ +WIRYV++P W+D + + F + +VE+I+LLPYH L
Sbjct: 153 KLIDSHDIPIWIRYVIIPAWTDALEDLEEMAAFVGQLEHVERIDLLPYHSL 203
>UniRef50_A4J0I5 Cluster: Pyruvate formate-lyase activating enzyme;
n=1; Desulfotomaculum reducens MI-1|Rep: Pyruvate
formate-lyase activating enzyme - Desulfotomaculum
reducens MI-1
Length = 229
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/75 (38%), Positives = 48/75 (64%)
Frame = -3
Query: 489 SGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVML 310
+ GG+T SGGE +LQ +F + CKKEGIHT +DT+G + ++++L DL++L
Sbjct: 67 NNGGITLSGGEPLLQPDFAFAILQQCKKEGIHTAVDTSGCID--VGALEKILPFTDLLLL 124
Query: 309 DL*QMNDEIHQNLVG 265
D+ ++D ++ L G
Sbjct: 125 DVKAVDDSLYHWLTG 139
Score = 50.8 bits (116), Expect = 2e-05
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = -2
Query: 232 YLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGN-VEKIELLPYHEL 83
Y+ + +W+RYVV+PG +D + +RL + +G+ V+K+ELLPYH +
Sbjct: 151 YIRQQKTPLWLRYVVLPGMNDSPEYRYRLEKLINSLGDQVKKVELLPYHTM 201
>UniRef50_Q894T6 Cluster: Benzylsuccinate synthase activating
enzyme; n=12; Bacteria|Rep: Benzylsuccinate synthase
activating enzyme - Clostridium tetani
Length = 320
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R F SGGGVT GGE ++Q + ACK+EGI+T ++T G+ I ++ E
Sbjct: 134 RVFYEMSGGGVTLGGGEVLMQPKAASSLLMACKQEGINTAIETCGYTNL--ETILKVAES 191
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DL + D+ +N + H L GV N
Sbjct: 192 VDLFLFDIKHINPDRHFELTGVRN 215
>UniRef50_O28822 Cluster: Pyruvate formate-lyase 2 activating
enzyme; n=1; Archaeoglobus fulgidus|Rep: Pyruvate
formate-lyase 2 activating enzyme - Archaeoglobus
fulgidus
Length = 302
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/84 (39%), Positives = 43/84 (51%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R F SGGGVT SGGE Q +F+ C+ GI +DT+GF VI+ +E
Sbjct: 120 RVFYKNSGGGVTFSGGEPYFQPDFLLSLLEECRNRGISAAVDTSGFTDW--KVIETSMEF 177
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DL + DL + E H+ GV N
Sbjct: 178 ADLFLYDLKDYSSERHRRFCGVGN 201
>UniRef50_A7CP89 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Opitutaceae bacterium TAV2|Rep:
Glycyl-radical enzyme activating protein family -
Opitutaceae bacterium TAV2
Length = 305
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
++F SGGGVT SGGE +Q F + K GIHT ++TN V ++ LL +
Sbjct: 124 KNFYANSGGGVTLSGGEVTVQTHFALETLALLKASGIHTAIETNLAVPWEQ--LESLLPL 181
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DLVM D+ M+ H+ GV+N
Sbjct: 182 LDLVMFDIKHMDSVTHREWTGVAN 205
>UniRef50_P75992 Cluster: Uncharacterized protein ymgA; n=6;
Escherichia coli|Rep: Uncharacterized protein ymgA -
Escherichia coli (strain K12)
Length = 90
Score = 60.1 bits (139), Expect = 3e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 1 SLQTLIKQLLVMKSAEEDAFRRDLIDSIIR 90
SLQTLIKQLLVMKSAEEDAFRRDLIDSIIR
Sbjct: 29 SLQTLIKQLLVMKSAEEDAFRRDLIDSIIR 58
>UniRef50_Q24T44 Cluster: Putative pyruvate-formate lyase-activating
enzyme; n=1; Desulfitobacterium hafniense Y51|Rep:
Putative pyruvate-formate lyase-activating enzyme -
Desulfitobacterium hafniense (strain Y51)
Length = 288
Score = 59.7 bits (138), Expect = 5e-08
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = -3
Query: 513 DLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELL 334
D +++ N SGGGVT SGGE + Q +F + CK+EG H LDT+G+ + ++L
Sbjct: 106 DKKYYEN-SGGGVTISGGEPMSQFDFCMALAKTCKEEGYHVALDTSGYAPTKQFL--DIL 162
Query: 333 EVPDLVMLDL*QMNDEIHQNLVGVSN 256
DL + DL M+ E +LVG N
Sbjct: 163 PYIDLFLYDLKHMDSERCHSLVGAFN 188
>UniRef50_Q6NJL9 Cluster: Putative oxidoreductase; n=1;
Corynebacterium diphtheriae|Rep: Putative oxidoreductase
- Corynebacterium diphtheriae
Length = 291
Score = 58.8 bits (136), Expect = 8e-08
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R+ ASGGG+T SGGE + Q F R + GIHT +DT+G++ + DE LE
Sbjct: 110 RNVFKASGGGLTISGGEPLFQIAFTRRVLKEVHDAGIHTTIDTSGYLGA--RLTDEDLEN 167
Query: 327 PDLVMLDL*QMNDEIHQNLVG 265
DLV+LD+ ++E + + G
Sbjct: 168 IDLVLLDVKSGDEETYHRVSG 188
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -2
Query: 316 NARSLTDERRDPPKSGWSFQPRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEF 137
+ +S +E G QP T++F L VWIR+V+VPG SD ++ + + +
Sbjct: 174 DVKSGDEETYHRVSGGRELQP-TIDFGNRLNAIGKPVWIRFVLVPGVSDAPENINNVADI 232
Query: 136 TRD-MGNVEKIELLPYHEL 83
NVE++E+LP+H +
Sbjct: 233 VAQWKDNVERVEVLPFHNM 251
>UniRef50_A0KHW8 Cluster: Benzylsuccinate synthase activating
enzyme; n=6; Bacteria|Rep: Benzylsuccinate synthase
activating enzyme - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 328
Score = 58.8 bits (136), Expect = 8e-08
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F +SGGGVT GGE LQ +F F CKK I+T ++T G + +L V D
Sbjct: 144 FYISSGGGVTIGGGEMSLQTDFAVALFSECKKMMINTAIETQGTTSLAN--YQQLAPVTD 201
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
+ D+ Q+N E H+ ++G+ N
Sbjct: 202 TFLFDIKQINSEQHKAMLGIGN 223
Score = 34.7 bits (76), Expect = 1.5
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = -2
Query: 235 KYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDM---GNVEKIELLPYHEL 83
++L + KV +R ++ G++D D+ E+ + + GN+ +I++LPYH+L
Sbjct: 231 EWLVDYGAKVIVRMPLIRGYNDSWDAITGAIEYVQKLAKRGNILRIDMLPYHQL 284
>UniRef50_Q1A665 Cluster: Glycerol dehydratase activator; n=4;
Clostridiales|Rep: Glycerol dehydratase activator -
Roseburia inulinivorans
Length = 264
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/86 (38%), Positives = 49/86 (56%)
Frame = -3
Query: 513 DLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELL 334
D+ +++ SGGG+T SGGE LQ EF RA K GI T +++ + +Y+ VI+ LL
Sbjct: 79 DMPYYLQ-SGGGITLSGGECTLQPEFSLGLLRAAKDLGISTAIESMAYA-KYE-VIETLL 135
Query: 333 EVPDLVMLDL*QMNDEIHQNLVGVSN 256
D ++D+ MN E H+ G N
Sbjct: 136 PYLDTYLMDIKHMNPEKHKEYTGHDN 161
>UniRef50_A6PKL2 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Glycyl-radical enzyme activating protein family -
Victivallis vadensis ATCC BAA-548
Length = 300
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F + SGGG+T SGGE + Q +F ++ + K+ G+H CL+T GF + +L D
Sbjct: 121 FYDNSGGGITLSGGEPMAQFDFTQELLKRAKEAGLHVCLETCGFAPQ--EYYARILPFVD 178
Query: 321 LVMLDL*QMNDEIHQNLVG 265
+ + DL ++ E H+ L G
Sbjct: 179 IFLYDLKTVDAEKHRRLTG 197
Score = 35.1 bits (77), Expect = 1.1
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -2
Query: 235 KYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
++L + +R +VPG +D ++ +GE + +V I++ PYH L
Sbjct: 208 RFLDENGAHIRLRCPLVPGVNDSEEELRGIGELAETLSHVAGIDVEPYHPL 258
>UniRef50_Q30WU8 Cluster: Radical-activating enzyme; n=1;
Desulfovibrio desulfuricans G20|Rep: Radical-activating
enzyme - Desulfovibrio desulfuricans (strain G20)
Length = 302
Score = 57.2 bits (132), Expect = 2e-07
Identities = 33/88 (37%), Positives = 49/88 (55%)
Frame = -3
Query: 519 SGDLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDE 340
S D ++N SGGG+T SGG+ +Q EF + ++EGI+TC++ G + +
Sbjct: 123 SSDYNLYLN-SGGGLTISGGDCAVQPEFTAALLKKAQEEGINTCVEITGAYPW--GRVQQ 179
Query: 339 LLEVPDLVMLDL*QMNDEIHQNLVGVSN 256
+ E D V DL M+DE H+ GVSN
Sbjct: 180 ITEDADYVYYDLKCMDDEKHKEGTGVSN 207
>UniRef50_Q1J9H6 Cluster: Pyruvate formate-lyase activating enzyme;
n=39; Streptococcus|Rep: Pyruvate formate-lyase
activating enzyme - Streptococcus pyogenes serotype M12
(strain MGAS2096)
Length = 276
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGG+T SGGE Q +F +A K G+HT ++T F + V L++ D
Sbjct: 99 FYEESGGGMTLSGGEIFAQFDFALALLKAAKAAGLHTAIETTAFAKHEQFV--TLIDYVD 156
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
+ DL N HQ + GV N
Sbjct: 157 FIYTDLKHYNQLRHQKVTGVRN 178
>UniRef50_A6CVH8 Cluster: Putative pyruvate formate-lyase activating
enzyme; n=1; Vibrio shilonii AK1|Rep: Putative pyruvate
formate-lyase activating enzyme - Vibrio shilonii AK1
Length = 316
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
+ + SGGG+T SGGEA+ Q EF + CK +H C++TNG + + D
Sbjct: 137 YFDKSGGGITLSGGEALKQFEFCLALAKMCKANDVHVCVETNGASKTEH--YRMIAPYVD 194
Query: 321 LVMLDL*QMNDEIHQNLVGVS 259
L + D DE+H+ L G++
Sbjct: 195 LFLFDYKATGDELHKTLTGMT 215
Score = 41.9 bits (94), Expect = 0.010
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -2
Query: 217 NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH 89
N V +R ++PG++ DD + + + M N++K+ELLPYH
Sbjct: 230 NASVILRCPMIPGYNLSDDHFAAIAQHAKSMTNIQKVELLPYH 272
>UniRef50_A1VC35 Cluster: Glycyl-radical enzyme activating protein
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
Glycyl-radical enzyme activating protein family -
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Length = 297
Score = 56.8 bits (131), Expect = 3e-07
Identities = 32/82 (39%), Positives = 40/82 (48%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGGVT GGE EF D +A +EGIH +DT GF + D L + D
Sbjct: 121 FYENSGGGVTFGGGEPTSGGEFFLDLVKAAHEEGIHVTVDTCGFCP--EERFDRTLALAD 178
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
L + D + E H+ L G N
Sbjct: 179 LFLFDCKHTDPEAHRRLTGQDN 200
>UniRef50_A6TPN2 Cluster: Glycyl-radical enzyme activating protein
family; n=2; Clostridiaceae|Rep: Glycyl-radical enzyme
activating protein family - Alkaliphilus metalliredigens
QYMF
Length = 301
Score = 56.4 bits (130), Expect = 4e-07
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGGVT SGGEA LQA+ +RD + I ++T+G+ +D + D +LE +
Sbjct: 121 FYRYSGGGVTFSGGEAALQADILRDLVCKLYDKAIDLAIETSGYF-NFDDMKD-ILEKLN 178
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
L+ +D+ M+D+ H+ G+ N
Sbjct: 179 LIFIDIKHMDDKKHRFYTGLRN 200
Score = 32.3 bits (70), Expect = 8.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 214 VKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH 89
V V +R V+ G + D ++ R +F + ++ K+ELLP+H
Sbjct: 215 VAVVVRIPVIDGVNSDVENIRRTAKFVKSNIDMPKLELLPFH 256
>UniRef50_A4E931 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Collinsella aerofaciens ATCC 25986
Length = 272
Score = 56.0 bits (129), Expect = 6e-07
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRAC--KKEG-IHTCLDTNGFVRRYDPV----IDELLEVP 325
GG+T SGGE +LQ EF+ D F A +G +HTCLD+ G+ +DP D +L
Sbjct: 86 GGITVSGGEPLLQPEFLADLFCAMHNNPDGRVHTCLDSCGYA--FDPAHPEKFDAVLNET 143
Query: 324 DLVMLDL*QMNDEIHQNLVGVSNPAR 247
D+V+LD+ + H+ L G +PAR
Sbjct: 144 DMVLLDIKHADPVEHKKLTG-CDPAR 168
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = -2
Query: 253 RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
R L F LA + +KV IR+VVVPG +D + +LG NV +E+LPYH +
Sbjct: 168 RILAFGDELARRKIKVVIRHVVVPGITDTVEECEKLGCLIAPWHNVVGLEMLPYHTM 224
>UniRef50_Q5JFY5 Cluster: Pyruvate-formate lyase-activating enzyme;
n=1; Thermococcus kodakarensis KOD1|Rep:
Pyruvate-formate lyase-activating enzyme - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 306
Score = 56.0 bits (129), Expect = 6e-07
Identities = 30/80 (37%), Positives = 49/80 (61%)
Frame = -3
Query: 495 NASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLV 316
++SGGGVT SGGE + Q +F+ + +A K+ I+T LDT+G+ V+ ++ + D+
Sbjct: 127 DSSGGGVTFSGGEPLFQPKFLVEALKASKERHINTALDTSGYAPL--DVLKKVEPLVDVF 184
Query: 315 MLDL*QMNDEIHQNLVGVSN 256
+ DL ++E H GVSN
Sbjct: 185 LYDLKLFDEEEHIKYTGVSN 204
Score = 42.3 bits (95), Expect = 0.007
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = -2
Query: 253 RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELCCQ 74
R LEF + V +R+ V+PG +D + + F +G E+I LLP+H++ +
Sbjct: 209 RNLEFLVKIGRAK-DVLLRFPVIPGITDTERNVSGWARFVSSLGGFERIHLLPFHDVSEK 267
Query: 73 LNRVGKHLPQP 41
R+G P
Sbjct: 268 YRRLGMEYRMP 278
>UniRef50_Q18SE0 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Desulfitobacterium hafniense DCB-2|Rep:
Glycyl-radical enzyme activating protein family -
Desulfitobacterium hafniense (strain DCB-2)
Length = 299
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
+ + + SGGGVT SGGEA+ F R K E IHT ++T+G+ + E+L +
Sbjct: 118 KSYYDMSGGGVTLSGGEALAHRAFCRKILTLLKTENIHTAVETSGYTD--TQTLIEMLPL 175
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DL + DL ++ E H G N
Sbjct: 176 IDLFLFDLKHISAEAHLRGTGKDN 199
Score = 35.1 bits (77), Expect = 1.1
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = -2
Query: 229 LANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
+ + + IRY ++PG++ ++ + + +++ N+ +I++LPYH L
Sbjct: 209 VVSAGANIIIRYTLIPGFNSQPEALSGIADLMKNL-NLNEIDILPYHRL 256
>UniRef50_Q180C7 Cluster: Putative pyruvate formate-lyase 3
activating enzyme; n=2; Clostridium difficile|Rep:
Putative pyruvate formate-lyase 3 activating enzyme -
Clostridium difficile (strain 630)
Length = 302
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQ-AEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLE 331
R F SGGGVT SGGE + Q +F+ CK +GIH +DT G+ + + + + +
Sbjct: 118 RIFYEESGGGVTLSGGEVMAQDMDFICGVINMCKSKGIHVAIDTCGYAKSEN--YERVAK 175
Query: 330 VPDLVMLDL*QMNDEIHQNLVGVSN 256
DL + D+ ++++ H G SN
Sbjct: 176 CADLFLYDIKLIDEDKHIKFTGKSN 200
>UniRef50_A6PQB5 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Glycyl-radical enzyme activating protein family -
Victivallis vadensis ATCC BAA-548
Length = 300
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/82 (37%), Positives = 44/82 (53%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGGVT SGGE Q++F + C K IH L+TN R ++++L+ D
Sbjct: 118 FYGESGGGVTVSGGEPGCQSDFTAEILHRCHKMKIHAALETNLAYSR--AILEKLVAGCD 175
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
LVM DL ++ + H+ G N
Sbjct: 176 LVMADLKHIDSQKHRAGTGHGN 197
Score = 39.9 bits (89), Expect = 0.040
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = -2
Query: 229 LANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL-CCQLNRVG 59
L + V + +R +VPG++DD + R+ EF + ++ ELL YH L C + R+G
Sbjct: 204 LRSLTVPLILRTPIVPGFNDDAGTIRRIAEFAVKLDTLQYYELLTYHPLGCGKAERLG 261
>UniRef50_Q3A611 Cluster: Pyruvate-formate lyase-activating enzyme;
n=1; Pelobacter carbinolicus DSM 2380|Rep:
Pyruvate-formate lyase-activating enzyme - Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 318
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGGVT GGE Q +F + C+ G+HT ++T G + + L E D
Sbjct: 132 FYMTSGGGVTIGGGEPTFQHDFAAAILKQCRLNGVHTAMETCG--QASWETYELLAEHVD 189
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
L + DL + ++H+ GV N
Sbjct: 190 LFLFDLKHADSDLHKKFTGVGN 211
>UniRef50_A7CT85 Cluster: (Formate-C-acetyltransferase)-activating
enzyme; n=1; Opitutaceae bacterium TAV2|Rep:
(Formate-C-acetyltransferase)-activating enzyme -
Opitutaceae bacterium TAV2
Length = 247
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R + +A+GGG+T SGGE Q F RA + E IHTCLDT+G PV + L
Sbjct: 61 RAWYDATGGGITLSGGEPAFQPRFTEALLRAARAENIHTCLDTSGHAP--PPVYERLAPH 118
Query: 327 PDLVMLD 307
+L + D
Sbjct: 119 VNLFLWD 125
>UniRef50_A1IEK1 Cluster: Putative pyruvate formate-lyase 3
activating enzyme; n=1; Candidatus Desulfococcus
oleovorans Hxd3|Rep: Putative pyruvate formate-lyase 3
activating enzyme - Candidatus Desulfococcus oleovorans
Hxd3
Length = 307
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F +ASGGGVT SGGE L +F D A K+E IHT ++T G + + L + D
Sbjct: 123 FFDASGGGVTLSGGEPTLFMDFTADLLTAIKREDIHTLVETCGLFDA-ERFVTMLYPMLD 181
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
+ D+ ++ H+ GV N
Sbjct: 182 TIYFDIKIIDPTAHKTYCGVPN 203
>UniRef50_Q6RFH6 Cluster: Pyruvate formate lyase activating enzyme;
n=1; Neocallimastix frontalis|Rep: Pyruvate formate
lyase activating enzyme - Neocallimastix frontalis
(Rumen fungus)
Length = 266
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = -2
Query: 253 RTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
R L+F K L +N+ W RYVV+PG++D + L E ++ E+IE LPY EL
Sbjct: 163 RCLKFLKELEKRNIPWWCRYVVLPGYTDSKEDIEALIELVKNSPTCERIEFLPYPEL 219
Score = 42.3 bits (95), Expect = 0.007
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = -3
Query: 516 GDLRHFM--NASGGGVTASGGEAILQAEFVRDWFRACKKE-GIHTCLDTNG 373
G+L+++ + GGGVT SGGE + Q F+ + A KK +HTC++T G
Sbjct: 73 GNLKNYYINSVGGGGVTVSGGEPLTQFGFLSCFLYAVKKHLNLHTCVETTG 123
>UniRef50_Q64N17 Cluster: Formate acetyltransferase activating
enzyme; n=2; Bacteroides fragilis|Rep: Formate
acetyltransferase activating enzyme - Bacteroides
fragilis
Length = 250
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/84 (30%), Positives = 47/84 (55%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R + GGVT +GGE + Q +FV + R + IHT ++T+G+ + + +E+ +
Sbjct: 75 RSIYTLNRGGVTLTGGEPLFQPDFVIELLR--QLPDIHTAIETSGYANTH--IFNEVTSL 130
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
DL++ D+ + E+H+ GV N
Sbjct: 131 ADLILFDIKHTDPEMHRKYTGVDN 154
>UniRef50_Q1ETW9 Cluster: Glycyl-radical enzyme activating; n=1;
Clostridium oremlandii OhILAs|Rep: Glycyl-radical enzyme
activating - Clostridium oremlandii OhILAs
Length = 248
Score = 53.6 bits (123), Expect = 3e-06
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGG+T SGGE Q EF++ + GI T ++T+G+ + E E+ D
Sbjct: 71 FYRTSGGGITFSGGEPTRQGEFLKTLVKNAMFLGIDTAIETSGYFNWEEQ--KETFEMLD 128
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
V +D+ M+ +H+ G+ N
Sbjct: 129 SVFVDIKHMDPAVHRKFTGIDN 150
Score = 36.3 bits (80), Expect = 0.49
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -2
Query: 202 IRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
IR ++ +DD D+ + GEF + ++E +E+LPYH L
Sbjct: 169 IRIPLISDVNDDGDNIEKTGEFILNHLSIEGVEILPYHNL 208
>UniRef50_Q18AX7 Cluster: Glycerol dehydratase activator; n=2;
Clostridium difficile|Rep: Glycerol dehydratase
activator - Clostridium difficile (strain 630)
Length = 300
Score = 53.6 bits (123), Expect = 3e-06
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYD-PVIDELLEVP 325
F S GG+T SGGE LQ +F+R+ +GI+ ++T G+ +D ++++ E
Sbjct: 120 FFFESNGGITFSGGEPTLQIDFLRELVDIFYDKGINIAIETCGY---FDWNKVNDVFEKI 176
Query: 324 DLVMLDL*QMNDEIHQNLVGVSN 256
D + +D+ M+D IH+ GVSN
Sbjct: 177 DHIFVDIKSMDDNIHKEYTGVSN 199
>UniRef50_Q8A3J8 Cluster: Putative pyruvate formate-lyase 3
activating enzyme; n=1; Bacteroides
thetaiotaomicron|Rep: Putative pyruvate formate-lyase 3
activating enzyme - Bacteroides thetaiotaomicron
Length = 299
Score = 53.2 bits (122), Expect = 4e-06
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
+ SGGG+T SGGE + Q +F D + C++ IHT ++TN + ++ L D
Sbjct: 120 YYQKSGGGITLSGGEPLQQKDFALDILQKCREHRIHTAVETN--LLTDVNTLEAFLPWVD 177
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
L M D +D +H+ G SN
Sbjct: 178 LWMCDFKMADDTLHRKWTGHSN 199
Score = 34.3 bits (75), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -2
Query: 235 KYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
++LA + V + IR V+P +D +++ + F R + N ELL +H L
Sbjct: 207 EFLAKQAVPLTIRTPVIPNVNDSEEAIESICRFIRQLPNQPAYELLGFHSL 257
>UniRef50_Q5P6A4 Cluster: Benzylsuccinate synthase activating
enzyme; n=5; Rhodocyclaceae|Rep: Benzylsuccinate
synthase activating enzyme - Azoarcus sp. (strain EbN1)
(Aromatoleum aromaticum (strain EbN1))
Length = 331
Score = 53.2 bits (122), Expect = 4e-06
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGGVT SGGE + EF R G+H ++T+ F + + ++ LL+V D
Sbjct: 126 FYRNSGGGVTISGGEPLYFPEFTRQLAGELHAAGVHVAIETSCFPKNRE-TVESLLDVVD 184
Query: 321 LVMLDL*QMNDEIHQNLVG 265
L ++DL ++ H ++G
Sbjct: 185 LFIVDLKSLDPRKHFEVIG 203
>UniRef50_Q84F14 Cluster: HpdA protein; n=4; Clostridium|Rep: HpdA
protein - Clostridium difficile
Length = 316
Score = 53.2 bits (122), Expect = 4e-06
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = -3
Query: 489 SGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVML 310
S GGVT SGGE +LQ EF+ + C + +HT ++T+ V + V +++ D +
Sbjct: 135 SNGGVTFSGGEPLLQHEFLHEVLLKCHEVNVHTAIETSACVS--NEVFNKIFNDIDFAFI 192
Query: 309 DL*QMNDEIHQNLVGVSN 256
D+ M+ E H+ GV N
Sbjct: 193 DIKHMDREKHKEQTGVYN 210
>UniRef50_Q1QPU4 Cluster: Pyruvate formate-lyase activating; n=1;
Nitrobacter hamburgensis X14|Rep: Pyruvate formate-lyase
activating - Nitrobacter hamburgensis (strain X14 / DSM
10229)
Length = 275
Score = 53.2 bits (122), Expect = 4e-06
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = -2
Query: 250 TLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
TL FA+ LA+ + VW+R+ +VPG +DD + + F M NVE +E+ P+H++
Sbjct: 180 TLRFAERLASLSKPVWVRFTLVPGETDDPANVDGIARFVAPMKNVEWVEVQPFHQM 235
Score = 52.8 bits (121), Expect = 5e-06
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = -3
Query: 486 GGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLD 307
GGG+T SGGE ++Q F R F K G+HT + T+GF+ D + L DLV+LD
Sbjct: 103 GGGLTISGGEPMVQLAFTRRIFAGAKALGLHTAIQTSGFLG--DRADENYLSNIDLVLLD 160
Query: 306 L*QMNDEIHQNLVG 265
+ + + ++ + G
Sbjct: 161 IKSSDPDTYRRVTG 174
>UniRef50_A6LRA5 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Glycyl-radical enzyme activating protein family -
Clostridium beijerinckii NCIMB 8052
Length = 300
Score = 52.8 bits (121), Expect = 5e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F S GGVT SGGE ++ EF + K++ IHT ++T G+ + + ++ D
Sbjct: 123 FYEESNGGVTLSGGEVLMHHEFASQLLKVLKEKNIHTTIETTGYTS--NEIFSSFIDDVD 180
Query: 321 LVMLDL*QMNDEIHQNLVGVSNPARWSSLNI 229
L++ D+ + E H + V N +L I
Sbjct: 181 LLLFDIKHYDREKHFKVTNVYNDLIIENLKI 211
>UniRef50_Q0YKJ2 Cluster: Glycyl-radical enzyme activating; n=3;
Geobacter|Rep: Glycyl-radical enzyme activating -
Geobacter sp. FRC-32
Length = 349
Score = 52.4 bits (120), Expect = 7e-06
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACK-KEGIHTCLDTNGFVRRYDPVIDELLE 331
R F N SGGGVT SGGE ++ F R+ R K +E +H ++T F ++ ++ LLE
Sbjct: 123 RIFYNNSGGGVTISGGEPLMYPAFTRELTRILKVREDVHVAVETCLFA-EWENIV-PLLE 180
Query: 330 VPDLVMLDL*QMNDEIHQNLVGVS 259
DL ++D+ + E ++ ++G S
Sbjct: 181 FVDLFIVDIKSLEPEKYEQVIGGS 204
>UniRef50_Q88UB1 Cluster: Formate acetyltransferase activating
enzyme; n=1; Lactobacillus plantarum|Rep: Formate
acetyltransferase activating enzyme - Lactobacillus
plantarum
Length = 267
Score = 52.0 bits (119), Expect = 9e-06
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
+ F SGGGVT SGGE + QA F + +A K GI+ +T G+ R V +E +
Sbjct: 85 KDFYEESGGGVTFSGGEVLFQASFAIELAKAVKAAGINLACETTGYAR--PKVFNEFMSY 142
Query: 327 PDLVMLDL*QMNDEIHQNLVGVSN 256
D + D Q + H+ G N
Sbjct: 143 MDFMYYDCKQWDPAQHRIGTGADN 166
>UniRef50_Q6AIS5 Cluster: Related to pyruvate formate-lyase
activating enzyme; n=3; Bacteria|Rep: Related to
pyruvate formate-lyase activating enzyme - Desulfotalea
psychrophila
Length = 340
Score = 52.0 bits (119), Expect = 9e-06
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGG+T SGGE QAEF R + I T ++T G + + I+ + +
Sbjct: 160 FYARSGGGMTLSGGEPFAQAEFALALLREARHRRIKTAVETCGAAKWEN--IEACVPYLN 217
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
+M D+ +N+E H+ GVSN
Sbjct: 218 TIMFDVKSLNEEKHKEFTGVSN 239
>UniRef50_A6LD37 Cluster: Putative pyruvate formate-lyase 3
activating enzyme; n=1; Parabacteroides distasonis ATCC
8503|Rep: Putative pyruvate formate-lyase 3 activating
enzyme - Parabacteroides distasonis (strain ATCC 8503 /
DSM 20701 / NCTC11152)
Length = 309
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/85 (36%), Positives = 46/85 (54%)
Frame = -3
Query: 513 DLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELL 334
D +++N SGGGVT SGGEA Q E + D CK E +HT ++T G V I + L
Sbjct: 126 DRDYYLN-SGGGVTFSGGEAFTQFEGLMDLLIQCKNEKLHTSVETCGQVNL--DKIKQAL 182
Query: 333 EVPDLVMLDL*QMNDEIHQNLVGVS 259
+ DL + D+ + ++ Q G +
Sbjct: 183 PLIDLFLFDIKHTDKDLLQKETGAN 207
>UniRef50_A5N4Z5 Cluster: Predicted glycyl radical enzyme activator;
n=1; Clostridium kluyveri DSM 555|Rep: Predicted glycyl
radical enzyme activator - Clostridium kluyveri DSM 555
Length = 258
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQ-AEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVP 325
F + SGGGVT SGGE + Q +++ + + + GI +DT G V + + +L
Sbjct: 77 FYDQSGGGVTLSGGEVMTQDMDYIEELVKEFHRIGISVVIDTCGVVPPSN--YERILPYT 134
Query: 324 DLVMLDL*QMNDEIHQNLVGVSN 256
DL + DL +N ++H GVSN
Sbjct: 135 DLFLYDLKLINSQMHTKYTGVSN 157
>UniRef50_A6LQ74 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Glycyl-radical enzyme activating protein family -
Clostridium beijerinckii NCIMB 8052
Length = 311
Score = 50.4 bits (115), Expect = 3e-05
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = -3
Query: 486 GGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLD 307
GGGVT SGGE + Q EFV + K+ GI+T ++T+ FV I E L D + D
Sbjct: 133 GGGVTLSGGEPLYQKEFVVVLLKMLKEAGINTAIETSLFVP--TEYIMEALPYLDTIFAD 190
Query: 306 L*QMNDEIHQNLVGVSN 256
L +++ H+ GV N
Sbjct: 191 LKVFDNDKHKIFTGVGN 207
>UniRef50_A1SHU9 Cluster: Radical SAM domain protein; n=1;
Nocardioides sp. JS614|Rep: Radical SAM domain protein -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 241
Score = 50.4 bits (115), Expect = 3e-05
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEG----IHTCLDTNGFVRRYDPVIDELLEVPDLVM 313
GVT SGGEA Q FVRD F + + + T +D+NG V DELL V D M
Sbjct: 72 GVTVSGGEATGQWRFVRDLFTEVRADPQLARLTTYVDSNGHA--LPRVWDELLPVADGFM 129
Query: 312 LDL*QMNDEIHQNLVGVSN 256
+DL ++ E+H+ L G N
Sbjct: 130 IDLKALDPEVHRRLTGRGN 148
>UniRef50_A3DFS5 Cluster: Radical SAM; n=1; Clostridium thermocellum
ATCC 27405|Rep: Radical SAM - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 280
Score = 49.2 bits (112), Expect = 6e-05
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL* 301
G+T SGGE L EF+ + F + G+ T +D+NG + ++ D LL V D VMLD+
Sbjct: 112 GITVSGGECTLYPEFLTELFILAQAHGLSTLIDSNGTL-DFEHYPD-LLAVTDGVMLDIK 169
Query: 300 QMNDEIHQNLVGVSN 256
+ E H+ + G SN
Sbjct: 170 AFDCEEHKRVTGWSN 184
>UniRef50_A6PKN6 Cluster: Glycyl-radical enzyme activating protein
family; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Glycyl-radical enzyme activating protein family -
Victivallis vadensis ATCC BAA-548
Length = 305
Score = 48.0 bits (109), Expect = 1e-04
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV 328
R F SGGG+T SGGE + +++ +KE IHTC++T+G+ I L+ +
Sbjct: 125 RVFYETSGGGMTVSGGEPLAHFDYLFHLLSLARKEKIHTCVETSGYASFEH--IRALIPL 182
Query: 327 PDLVMLDL*QMNDEIHQNLVGV 262
L + D + ++ H+ L GV
Sbjct: 183 VSLWLWDF-KASEADHRRLTGV 203
>UniRef50_Q5IAC3 Cluster: PFL activating enzyme; n=2; Chlamydomonas
reinhardtii|Rep: PFL activating enzyme - Chlamydomonas
reinhardtii
Length = 336
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -2
Query: 259 QPRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
Q L FA LA + + ++RYV +PG++D +L E+ + + IELLPYH L
Sbjct: 235 QRGALRFADQLAERKIPFYLRYVYIPGYTDGVKDIDKLIEWCKQQPTFQGIELLPYHVL 293
Score = 39.9 bits (89), Expect = 0.040
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNG 373
GG+T SGGEA+LQ FV F+ G++T +DT G
Sbjct: 161 GGITISGGEAMLQPHFVSTVFQEVHALGLNTTVDTTG 197
>UniRef50_Q250T6 Cluster: Pyruvate-formate lyase-activating enzyme;
n=4; Bacteria|Rep: Pyruvate-formate lyase-activating
enzyme - Desulfitobacterium hafniense (strain Y51)
Length = 310
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGG+T SGGE ++Q FV + + ++ + T ++T G+ ++ + +
Sbjct: 135 FYARSGGGLTFSGGEPLMQGNFVAETLKEARRRRLKTTIETCGYADW--STMERVCQHLT 192
Query: 321 LVMLDL*QMNDEIHQNLVGVSN 256
+++D+ M+ E HQ G SN
Sbjct: 193 SLIMDIKCMDPEKHQEYTGASN 214
>UniRef50_A7FZD9 Cluster: Radical SAM domain protein; n=7;
Clostridium|Rep: Radical SAM domain protein -
Clostridium botulinum (strain ATCC 19397 / Type A)
Length = 278
Score = 45.6 bits (103), Expect = 8e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVR-RYDPVIDELLEVPDLVMLDL 304
G+T SGGE LQ +F+ D F K G+ +DTNG + +P + EL+ D+ MLD+
Sbjct: 113 GITVSGGECTLQRDFLIDLFEKIKLLGLTIFVDTNGSLDFSKNPKLTELM---DMAMLDV 169
Query: 303 *QMNDEIHQNLVGVSN 256
+ + H+ L +N
Sbjct: 170 KSFDSDEHKMLTKKNN 185
>UniRef50_A6NTG3 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 280
Score = 45.6 bits (103), Expect = 8e-04
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEGIHTCL-DTNGFVRRYDPVIDELLEVPDLVMLDL 304
G+T SGGE L EF+ F + G+ TCL D+NG V + L+ V D VMLD+
Sbjct: 115 GITVSGGECTLYPEFLTGLFTLARARGL-TCLADSNGTVPL--APLSGLMAVCDGVMLDV 171
Query: 303 *QMNDEIHQNLVGVSN 256
+ ++H+ L G N
Sbjct: 172 KSWDPDVHKALTGSGN 187
>UniRef50_Q8A8W2 Cluster: Pyruvate formate-lyase activating enzyme;
n=2; Bacteroides|Rep: Pyruvate formate-lyase activating
enzyme - Bacteroides thetaiotaomicron
Length = 208
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/92 (29%), Positives = 55/92 (59%)
Frame = -3
Query: 531 FDEGSGDLRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDP 352
++E D +F+ A+ GG+T GGE LQ++F+ ++ + C +E ++T+ V + +
Sbjct: 58 YEEVRQDELYFL-ATNGGITFGGGEPCLQSDFIYEFRQLCGQEW-QLSVETSLNVTQEN- 114
Query: 351 VIDELLEVPDLVMLDL*QMNDEIHQNLVGVSN 256
I++L+ V D ++D+ +N+ I+Q G +N
Sbjct: 115 -IEKLVPVVDSYIIDIKDINNTIYQKYTGKNN 145
>UniRef50_Q3ADQ7 Cluster: Putative pyruvate formate-lyase activating
enzyme; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: Putative pyruvate formate-lyase activating
enzyme - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 281
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACK-KEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL 304
GVT SGGE LQA+F+ + + K K + +DTN F+ + L + D +M DL
Sbjct: 112 GVTFSGGECTLQADFILEVSKKLKEKSNLTVFVDTNCFLE--EEKFLTLCQNIDGIMADL 169
Query: 303 *QMNDEIHQNLVGVSNPARWSSLN 232
+ +H+ L GV+N + +LN
Sbjct: 170 KAFDPVLHRKLTGVANELIFQNLN 193
>UniRef50_A6NRU9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 242
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = -3
Query: 486 GGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLD 307
GGGVT +GGEA +Q + V++ GIHT L++NG P++ L L++LD
Sbjct: 68 GGGVTLTGGEAAMQPQAVKELLSVLSGHGIHTALESNGTA----PLLSTLYPYLSLLLLD 123
>UniRef50_Q8EEH4 Cluster: Radical activating enzyme; n=3;
Gammaproteobacteria|Rep: Radical activating enzyme -
Shewanella oneidensis
Length = 286
Score = 44.8 bits (101), Expect = 0.001
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKE---GIHTC-LDTNGFVRRYDPVIDE 340
RHF+N G+T SGGEA LQ F+ + F+A K TC LDTNG + +
Sbjct: 108 RHFIN----GITVSGGEASLQLPFIIELFKAIKASTSLSQLTCMLDTNGSLSLTG--WHK 161
Query: 339 LLEVPDLVMLDL*QMNDEIHQNLVGVSNPARWSSLNIWRTKM*RCGSATLLSQAGLTMTI 160
LL D M+DL + H+ + G N A + S+ + + + LL G+T
Sbjct: 162 LLPFLDGAMVDLKAWQRDTHRYITGRDNHAVFKSIELLAQQQ-KLYEVRLLHIPGITDFE 220
Query: 159 QRIASVN 139
Q I +++
Sbjct: 221 QEIDALS 227
>UniRef50_P39409 Cluster: Uncharacterized protein yjjW; n=48;
Gammaproteobacteria|Rep: Uncharacterized protein yjjW -
Escherichia coli (strain K12)
Length = 287
Score = 44.8 bits (101), Expect = 0.001
Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEG--IH-TCL-DTNGFVRRYDPVIDELLEVPDLVM 313
G+T SGGEA Q FV F A K + H TCL D+NG + + ++LL V D M
Sbjct: 115 GITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLS--ETGWEKLLPVCDGAM 172
Query: 312 LDL*QMNDEIHQNLVGVSN 256
LDL E HQ L G N
Sbjct: 173 LDLKAWGSECHQQLTGRDN 191
>UniRef50_Q1EUE2 Cluster: Radical SAM; n=2; Clostridiaceae|Rep:
Radical SAM - Clostridium oremlandii OhILAs
Length = 256
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL 304
G+T SGGEA + ++F+ + F+ KK GI +DTNG + D +D L+E D + D+
Sbjct: 90 GITVSGGEATIYSDFLVELFKEVKKLGITCYVDTNGIFNK-DHKLD-LIEATDKFLFDI 146
>UniRef50_P32675 Cluster: Pyruvate formate-lyase 2-activating
enzyme; n=20; Enterobacteriaceae|Rep: Pyruvate
formate-lyase 2-activating enzyme - Escherichia coli
(strain K12)
Length = 292
Score = 44.4 bits (100), Expect = 0.002
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGF--VRRYDPVIDELLEV 328
F SGGGVT SGGE ++QAEF + + + G+ ++T G + P+ EV
Sbjct: 113 FFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEV 172
Query: 327 P-DLVMLDL*QMNDEIHQNL 271
DL ++D Q D + NL
Sbjct: 173 LFDLKIMDATQARDVVKMNL 192
>UniRef50_A6G8C7 Cluster: Pyruvate formate-lyase-activating enzyme,
putative; n=1; Plesiocystis pacifica SIR-1|Rep: Pyruvate
formate-lyase-activating enzyme, putative - Plesiocystis
pacifica SIR-1
Length = 318
Score = 42.7 bits (96), Expect = 0.006
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNG---FVRRYDPVIDEL 337
R F +SGGGVT SGGE +L F+ + + GI C++T G F R ++ L
Sbjct: 122 RPFFESSGGGVTFSGGEPVLHEAFLLELLPRLGEAGISRCIETAGAYPFAR-----LEAL 176
Query: 336 LEVPDLVMLDL*QMNDEIHQNLVGVSN 256
L + V+ D+ ++ H L G N
Sbjct: 177 LPHLERVLYDVKHVDGGRHLELCGRDN 203
>UniRef50_A4SIR2 Cluster: Pyruvate formate lyase activating enzyme;
n=1; Aeromonas salmonicida subsp. salmonicida A449|Rep:
Pyruvate formate lyase activating enzyme - Aeromonas
salmonicida (strain A449)
Length = 222
Score = 42.7 bits (96), Expect = 0.006
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACK--KEGIH-TC-LDTNGFVRRYDPVIDELLEVPDLVM 313
G+T SGGEA Q FV F A + ++ H TC LD+NG + + LL V D M
Sbjct: 47 GITVSGGEATTQLPFVIALFTAIRQAQDLSHLTCLLDSNGSLA--ETGWQRLLPVLDGAM 104
Query: 312 LDL*QMNDEIHQNLVGVSNPARWSSLNI 229
+DL D +H +L GV +SL +
Sbjct: 105 IDLKGWRDSVHHSLTGVGRERVLASLRL 132
>UniRef50_Q0YLF3 Cluster: 4Fe-4S ferredoxin, iron-sulfur
binding:Radical SAM; n=1; Geobacter sp. FRC-32|Rep:
4Fe-4S ferredoxin, iron-sulfur binding:Radical SAM -
Geobacter sp. FRC-32
Length = 304
Score = 41.9 bits (94), Expect = 0.010
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFV 367
GG+T SGGEA+LQ E V R + G HT ++T+G +
Sbjct: 135 GGLTLSGGEALLQGEAVAHLLRLARDAGFHTTVETSGLL 173
>UniRef50_Q082I5 Cluster: Radical SAM domain protein; n=5;
Shewanella|Rep: Radical SAM domain protein - Shewanella
frigidimarina (strain NCIMB 400)
Length = 320
Score = 41.9 bits (94), Expect = 0.010
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKK----EGIHTCLDTNGFVRRYDPVIDE 340
RHF+N G+T SGGEA LQ F+ + F A K + LDTNG + +
Sbjct: 142 RHFIN----GITLSGGEASLQLPFIIELFSAIKSSEHLSHLSCMLDTNGSLS--STGWHK 195
Query: 339 LLEVPDLVMLDL*QMNDEIHQNLVGVSNPARWSSLNI 229
LL D M+DL + H + G N ++S+ +
Sbjct: 196 LLPFLDGAMVDLKAWQQDTHHYITGRDNQPVFTSIEL 232
>UniRef50_A6D1Q8 Cluster: Pyruvate formate lyase II activase; n=1;
Vibrio shilonii AK1|Rep: Pyruvate formate lyase II
activase - Vibrio shilonii AK1
Length = 303
Score = 41.9 bits (94), Expect = 0.010
Identities = 20/81 (24%), Positives = 42/81 (51%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPD 322
F SGGGVT SGGE ++ F + + ++ G T ++T+G + ++ + D
Sbjct: 124 FYQTSGGGVTLSGGEILVHGRFCIELLKQLRRLGYKTAIETSG--HGNSKQLSDMAQYCD 181
Query: 321 LVMLDL*QMNDEIHQNLVGVS 259
++ D M++ + ++G++
Sbjct: 182 EILFDFKLMDEVRAKEIIGIN 202
>UniRef50_A5ZSK4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 298
Score = 41.9 bits (94), Expect = 0.010
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTN-GFVRRYDPVIDELLE 331
R S GGVT SGGE ++QAE + D ++E I +T F + VI + E
Sbjct: 120 RRLYEISEGGVTFSGGEPMMQAEILYDLCSRLQEEHISVAFETALAFPWK---VIHRMTE 176
Query: 330 VPDLVMLDL*QMNDEIHQNLVGVSN 256
DL ++D ++E H+ G N
Sbjct: 177 CVDLFLVDFKIFDNEKHKEYTGTEN 201
Score = 33.5 bits (73), Expect = 3.4
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -2
Query: 208 VWIRYVVVPGWSDDDDSAHRLGEFTRDMG-NVEKIELLPYHE 86
+ IR ++ G +D+ ++A +F +G N++ +ELLPYH+
Sbjct: 217 IMIRIPIIKGINDEIENAVVTADFLAALGKNIKSVELLPYHD 258
>UniRef50_P75794 Cluster: Putative pyruvate formate-lyase
3-activating enzyme; n=27; Gammaproteobacteria|Rep:
Putative pyruvate formate-lyase 3-activating enzyme -
Escherichia coli (strain K12)
Length = 308
Score = 41.1 bits (92), Expect = 0.017
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -3
Query: 501 FMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDT 379
F + SGGG+T SGGE +Q E +A + GIHT ++T
Sbjct: 128 FYDRSGGGLTLSGGEPFMQPEMAMALLQASHEAGIHTAVET 168
>UniRef50_A6PMN6 Cluster: Radical SAM domain protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Radical SAM
domain protein - Victivallis vadensis ATCC BAA-548
Length = 298
Score = 40.7 bits (91), Expect = 0.023
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL 304
GGVT GGE LQA + D KK IHT +++N + V E+ DL + DL
Sbjct: 119 GGVTFGGGEPTLQAPELLDCINRLKKHRIHTAIESNATTPEFPDVAREV----DLAIADL 174
Query: 303 *QMNDEIHQNLVG 265
E+ + G
Sbjct: 175 KAGTPEVFHDCTG 187
>UniRef50_Q9X1N8 Cluster: Pyruvate formate-lyase activating enzyme,
putative; n=7; Bacteria|Rep: Pyruvate formate-lyase
activating enzyme, putative - Thermotoga maritima
Length = 331
Score = 37.5 bits (83), Expect = 0.21
Identities = 22/78 (28%), Positives = 41/78 (52%)
Frame = -3
Query: 498 MNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDL 319
MN + G+ + E ++ EFV D R +EG++ L TNGF+ +P ++ L +
Sbjct: 116 MNRNSKGIAFTYNEPLVWYEFVLDTSRVAVREGMYCVLVTNGFINE-EP-LELLFQSVHA 173
Query: 318 VMLDL*QMNDEIHQNLVG 265
+ +DL N + ++ + G
Sbjct: 174 MNIDLKGFNRDFYREIGG 191
>UniRef50_Q8R8P0 Cluster: Pyruvate-formate lyase-activating enzyme;
n=6; Clostridia|Rep: Pyruvate-formate lyase-activating
enzyme - Thermoanaerobacter tengcongensis
Length = 328
Score = 37.5 bits (83), Expect = 0.21
Identities = 19/72 (26%), Positives = 40/72 (55%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL* 301
G+ + E ++ E+V + + KK+G+ T L TNG++ +P + LL D + +D+
Sbjct: 122 GIAFTYNEPLIWYEYVYEGLQEAKKQGLKTVLVTNGYINP-EP-LKNLLPYVDAMNIDVK 179
Query: 300 QMNDEIHQNLVG 265
++ ++ +VG
Sbjct: 180 AFTEDFYKKIVG 191
>UniRef50_P44743 Cluster: Uncharacterized protein HI0520; n=13;
Pasteurellaceae|Rep: Uncharacterized protein HI0520 -
Haemophilus influenzae
Length = 262
Score = 37.1 bits (82), Expect = 0.28
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL 304
GVT SGGE + + + F+A + +G+ LD++GF +D V L++V D + DL
Sbjct: 75 GVTVSGGEPTIHHKKLVPLFKALRSQGLTCYLDSSGFF-EFDRVC-SLIDVTDKFLFDL 131
>UniRef50_Q9V0N1 Cluster: Act-like pyruvate formate-lyase activating
enzyme related protein; n=6; Archaea|Rep: Act-like
pyruvate formate-lyase activating enzyme related protein
- Pyrococcus abyssi
Length = 348
Score = 36.7 bits (81), Expect = 0.37
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -3
Query: 459 EAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL*QMNDEIH 280
E + EFV D + KKEG++ L TNG++ +P EL D + +D+ +D +
Sbjct: 130 EPTIWYEFVLDTAKLAKKEGLNNILVTNGYINE-EP-FRELAPYIDAMNIDIKAFDDRFY 187
Query: 279 QNLVGVSN 256
+ V N
Sbjct: 188 MKIASVPN 195
>UniRef50_Q82LA4 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 340
Score = 35.9 bits (79), Expect = 0.65
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL 304
GV A GG+ +L VR WF A +T L NG + VI + D+ ++DL
Sbjct: 223 GVRAKGGDPVLVTPIVRRWFNADGTLNNNTALLVNGLGVDHPAVIRSVAAAEDVPLIDL 281
>UniRef50_Q8U3Z7 Cluster: Co-factor modifying protein; n=2;
Thermococcaceae|Rep: Co-factor modifying protein -
Pyrococcus furiosus
Length = 284
Score = 35.5 bits (78), Expect = 0.85
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = -3
Query: 465 GGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL*QMNDE 286
GGE L E ++ +A K GI L TNG + + DE++++ + + +++E
Sbjct: 127 GGEPTLDPE-LKPLMKALAKRGIKVWLVTNG-----EGLDDEIVDIAYGITFSIKALDEE 180
Query: 285 IHQNLVGVSN 256
+H+ + GVSN
Sbjct: 181 LHKRITGVSN 190
>UniRef50_Q8TWE9 Cluster: Ferredoxin domain fused to
pyruvate-formate lyase-activating enzyme; n=1;
Methanopyrus kandleri|Rep: Ferredoxin domain fused to
pyruvate-formate lyase-activating enzyme - Methanopyrus
kandleri
Length = 390
Score = 35.5 bits (78), Expect = 0.85
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = -3
Query: 477 VTASGGEAILQAEFVRDWFRACKKEG---IHTCLDTNGFVRRYDPVIDELLE 331
V SGGE L EF+ ++ R C++ G + +DTNG V D +DEL+E
Sbjct: 208 VAISGGEPTLNREFLVEFVRKCREYGGPDLRVHVDTNGTVLSPD-YVDELVE 258
>UniRef50_A2EUJ7 Cluster: Flavodoxin family protein; n=1;
Trichomonas vaginalis G3|Rep: Flavodoxin family protein
- Trichomonas vaginalis G3
Length = 516
Score = 35.1 bits (77), Expect = 1.1
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = -3
Query: 477 VTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL*Q 298
+ ++ E + +EF + F+ K++G++T TNG+ +D L D V +DL
Sbjct: 134 IASTYNEPTVSSEFSHEVFKLAKEKGLYTVYVTNGY--ESVECLDYLAPYLDAVNIDLKS 191
Query: 297 MNDEIHQNLVG 265
ND+ + G
Sbjct: 192 FNDKFYMKTCG 202
>UniRef50_Q8ZSM8 Cluster: Pyruvate formate-lyase activating enzyme
homolog; n=4; Pyrobaculum|Rep: Pyruvate formate-lyase
activating enzyme homolog - Pyrobaculum aerophilum
Length = 364
Score = 35.1 bits (77), Expect = 1.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 480 GVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFV 367
GV S E L AE+ + FR + G+H ++TNG++
Sbjct: 145 GVNVSFNEPTLLAEYAEEVFRLARARGLHASINTNGYL 182
>UniRef50_Q8TWT0 Cluster: Pyruvate-formate lyase-activating enzyme;
n=1; Methanopyrus kandleri|Rep: Pyruvate-formate
lyase-activating enzyme - Methanopyrus kandleri
Length = 346
Score = 35.1 bits (77), Expect = 1.1
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = -3
Query: 459 EAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL*QMNDEIH 280
E I+ E+ + F AC++EG+ TNGF R I L EV D +DL ++ +
Sbjct: 141 EPIIGLEYTLETFEACREEGLGCVYVTNGFATRRTAKI--LGEVLDAANVDLKAFTEDFY 198
Query: 279 QNLVGVSNPARWSSLNIWR 223
+++ + IW+
Sbjct: 199 RDVAKAWLKPVLRTCKIWK 217
>UniRef50_A1RR24 Cluster: Anaerobic ribonucleoside-triphosphate
reductase activating protein; n=1; Pyrobaculum
islandicum DSM 4184|Rep: Anaerobic
ribonucleoside-triphosphate reductase activating protein
- Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)
Length = 239
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -3
Query: 468 SGGEAILQAEFVRDWFRACKKEGIHTCLDTNG-FVRRYDPVIDEL 337
+GGE +LQAE +R F+ ++ G+ L+TN + + VIDE+
Sbjct: 70 TGGEPLLQAEELRHLFKRAREAGVARSLNTNATLTKALEKVIDEV 114
>UniRef50_A4RTI0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 324
Score = 34.7 bits (76), Expect = 1.5
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = -2
Query: 241 FAKYLANKNVKVWIRYVV--------VPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH 89
F K L + VK W+R+V+ V ++D++ L E + VE IELLPYH
Sbjct: 223 FLKELNRRRVKTWLRFVLMSDPDSRFVDFRTNDENELRGLAELAKTHECVEGIELLPYH 281
Score = 34.3 bits (75), Expect = 2.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -3
Query: 507 RHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDT 379
+++ ++ GGG+T SGGE +LQ FV + G+ +DT
Sbjct: 133 KYYASSEGGGLTLSGGECLLQPAFVEAVAIKTHEIGLTVAIDT 175
>UniRef50_A3DLF1 Cluster: Radical SAM domain protein; n=1;
Staphylothermus marinus F1|Rep: Radical SAM domain
protein - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 274
Score = 34.3 bits (75), Expect = 2.0
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -2
Query: 235 KYLANKNVKVWIRY-VVVPGWSDDDDSAHRLGEFTRDMGN 119
K L++K + WI Y V+PG++DD D+ ++ E R+ G+
Sbjct: 166 KQLSSKGIDTWIFYGPVIPGYNDDLDTRIKIIELARETGS 205
>UniRef50_Q1IXN5 Cluster: Transposase Tn3; n=2; Bacteria|Rep:
Transposase Tn3 - Deinococcus geothermalis (strain DSM
11300)
Length = 1006
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 19 KQLLVMKSAEEDAFRRDLIDSIIRGRGEARFSQRCPYHG*IHRGDALNRHRQ 174
K L ++ +++A+RR ++ + RG G R R +HG H+G+ R+R+
Sbjct: 868 KTLYLLAYVQDEAYRRRILGQLNRGEGRHRVG-RAVFHG--HKGELRQRYRE 916
>UniRef50_Q58214 Cluster: Uncharacterized protein MJ0804; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0804 -
Methanococcus jannaschii
Length = 286
Score = 33.9 bits (74), Expect = 2.6
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 462 GEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVP-DLVMLDL*QMNDE 286
GE +L E V+ CK G+ L TNG + + +I EL ++ DL+M+ L + E
Sbjct: 84 GEPLLDLEGVKKAIEFCKDLGLRVDLQTNGTLLN-EEIIKELKDLGLDLIMISLSSFSRE 142
Query: 285 IHQNLVG 265
++ L G
Sbjct: 143 KYKLLTG 149
>UniRef50_A6GMT0 Cluster: YapH protein; n=1; Limnobacter sp.
MED105|Rep: YapH protein - Limnobacter sp. MED105
Length = 2380
Score = 33.5 bits (73), Expect = 3.4
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = -3
Query: 294 NDEIHQNLVGVSNPARWSSLNIWRTKM*RCGSATLLSQAGLTMTIQRIASVNLPVIWATL 115
+D +H NL G ++ LN+ G+AT ++ + ++++ R+AS N+ + L
Sbjct: 1178 SDVVHLNLTGAASITASGGLNV-------SGTATSVNASANSLSVSRLASENIVLQADQL 1230
Query: 114 RKSSFSPTTNYAVN 73
++FS T N +N
Sbjct: 1231 ELNNFSATGNLTLN 1244
>UniRef50_A3CVT6 Cluster: Anaerobic ribonucleoside-triphosphate
reductase activating protein; n=1; Methanoculleus
marisnigri JR1|Rep: Anaerobic
ribonucleoside-triphosphate reductase activating protein
- Methanoculleus marisnigri (strain ATCC 35101 / DSM
1498 / JR1)
Length = 232
Score = 33.5 bits (73), Expect = 3.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 483 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELL--EVPDLVML 310
G V SGGE LQ + + A + G+ L TNG R VI++LL + D++ L
Sbjct: 65 GAVVFSGGEPTLQGQALAHLAAAARNMGLSVGLHTNGIFPR---VIEDLLAKHLVDMIAL 121
Query: 309 DL 304
D+
Sbjct: 122 DI 123
>UniRef50_A0DM33 Cluster: Chromosome undetermined scaffold_56, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_56,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 116
Score = 33.1 bits (72), Expect = 4.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 289 VVHLLEIEHYQVGYFQQFINHRIV----TTNKTVGVQTGMNAFFFAGAEPVTNKLSLQDC 456
++ LL + Q G +Q + +V T +G + G+ A F+ PV S
Sbjct: 9 ILILLIVGQVQCGLWQTIVESTVVSGVTTATIAIGAKVGLAAAGFSSVGPVAG--SFAAA 66
Query: 457 FTAGCGNAAAGSVHKVAK 510
AG GN AGS+ +A+
Sbjct: 67 TQAGVGNVVAGSLFSIAQ 84
>UniRef50_UPI0000F2E189 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 431
Score = 32.7 bits (71), Expect = 6.0
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 401 PSFLQARNQSRTNSAC-RIASPPDAVTPPPEAFIKWRRSPLPSSNLQ 538
P FL R +RT++ ++AS D PPP WRR+ P + L+
Sbjct: 146 PKFLSTRLAARTSTGLFKLASRHDPPPPPPSYCKGWRRAGQPPTKLR 192
>UniRef50_A1IF25 Cluster: Radical SAM precursor; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Radical SAM precursor
- Candidatus Desulfococcus oleovorans Hxd3
Length = 396
Score = 32.7 bits (71), Expect = 6.0
Identities = 19/76 (25%), Positives = 41/76 (53%)
Frame = -3
Query: 492 ASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVM 313
A + + EA+ E++ D R +++GI + L +NG++ + +P + L +V D
Sbjct: 180 AGAASIAYTYSEAVTFFEYMYDTARLARQQGIKSLLISNGYISK-NP-LSALCDVIDGAN 237
Query: 312 LDL*QMNDEIHQNLVG 265
++L +D +++ L G
Sbjct: 238 INLKSFDDALYRKLNG 253
>UniRef50_Q2GM07 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 281
Score = 32.7 bits (71), Expect = 6.0
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 440 SLFVTGSAPA-KKKAFIPVWTPTVLFVVTIR*LMNCWKYPTW 318
SLFVTG+APA K+ F+ WT + + LM CW P W
Sbjct: 115 SLFVTGAAPAVGKRLFMARWTTLTYYSMK---LMLCW-LPEW 152
>UniRef50_Q58624 Cluster: Uncharacterized protein MJ1227; n=6;
Methanococcales|Rep: Uncharacterized protein MJ1227 -
Methanococcus jannaschii
Length = 240
Score = 32.7 bits (71), Expect = 6.0
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -3
Query: 477 VTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELL--EVPDLVMLDL 304
+ SGGE LQ + V + R K++G +DTNG + VI+EL+ ++ D V +D+
Sbjct: 66 IVISGGEPTLQKDAVIEIARYAKEKGFPVKIDTNG---THPEVIEELIKNKLIDYVAIDV 122
>UniRef50_Q4RZ28 Cluster: Chromosome 8 SCAF14972, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 8 SCAF14972, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 676
Score = 32.3 bits (70), Expect = 8.0
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 310 EHYQVGYFQQFINHRIVTTNKTVGVQTGMNAFFFAGAEPVTNKLSLQDCFTAGCGN-AAA 486
+H+Q G FQ ++H + ++K +Q+ ++ F NKL ++C + +
Sbjct: 432 QHHQ-GAFQA-LSHSYIPSSKECSIQSCLHQFTSVELLMGNNKLLCENCTERRHKHLRKS 489
Query: 487 GSVH-KVAKVTTSFIKSSTVTSLPP 558
GS KV K+ TS K ++SLPP
Sbjct: 490 GSAEKKVEKMYTSARKQMLISSLPP 514
>UniRef50_Q1IMN2 Cluster: Putative uncharacterized protein
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Putative uncharacterized protein precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 665
Score = 32.3 bits (70), Expect = 8.0
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 357 DPVIDELLEVPDLVMLDL*QMNDEIHQNLVGVSNPA 250
D I+ LL +PD DL ++NDE Q L+ NPA
Sbjct: 196 DKRIEALLRLPDQDRRDLLRINDETRQQLISGMNPA 231
>UniRef50_A6ALD1 Cluster: Benzylsuccinate synthase activating
enzyme; n=13; Gammaproteobacteria|Rep: Benzylsuccinate
synthase activating enzyme - Vibrio harveyi HY01
Length = 313
Score = 32.3 bits (70), Expect = 8.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -2
Query: 211 KVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEL 83
++ IR VVPG++D + + +F + + +++ LPYH L
Sbjct: 227 RIVIRVPVVPGFNDTIEELKDIIDFAASLESCQELHFLPYHTL 269
>UniRef50_Q01C13 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 368
Score = 32.3 bits (70), Expect = 8.0
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 253 RTLEFAKYLAN-KNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIEL 101
R LE +YLA+ +K I Y V+ G +DD+ A +LGE R G EKI L
Sbjct: 189 RVLE--EYLASGPKMKTMIEYCVLGGVNDDETCAEKLGELFR--GKEEKIIL 236
>UniRef50_A0MEP5 Cluster: Putative uncharacterized protein; n=2;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 326
Score = 32.3 bits (70), Expect = 8.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 471 ASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVPDLVMLDL*QMN 292
A G ++ ++ RDW+ A EG+ CLD + R ++ +V D++M+D N
Sbjct: 212 AEGWRFVVARDYTRDWWSALGFEGLTACLDDAFWKLREAGWTED--DVRDMMMMDSVDQN 269
Query: 291 DEIHQ 277
I Q
Sbjct: 270 TCIQQ 274
>UniRef50_Q2NEQ2 Cluster: Predicted glycyl radical activating
enzyme; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
Predicted glycyl radical activating enzyme -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 238
Score = 32.3 bits (70), Expect = 8.0
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -3
Query: 477 VTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGF-VRRYDPVIDELLEVPDLVMLDL 304
+ SGGEA+L + V+ + + K+ + LDTNG + +ID+L D V +D+
Sbjct: 65 IVISGGEALLHIDVVKHYIQKAKEFDLLIKLDTNGLHPENLNQIIDDL----DYVAIDI 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,261,385
Number of Sequences: 1657284
Number of extensions: 12607342
Number of successful extensions: 41869
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 39982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41794
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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