Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0508.Seq
         (560 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010052-1|AAQ22521.1|  565|Drosophila melanogaster LD20870p pro...    32   0.46 
AE014297-4663|AAF57085.1| 1105|Drosophila melanogaster CG12072-P...    31   1.1  
AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC...    30   2.5  
AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB...    30   2.5  
AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA...    30   2.5  
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA...    28   7.5  

>BT010052-1|AAQ22521.1|  565|Drosophila melanogaster LD20870p
           protein.
          Length = 565

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
 Frame = +3

Query: 252 RGWKLQPDFGGSRRSS------VRDRALPGRVLPAVHQSPDRNDEQNR 377
           R WK+  D GGS  SS      V+ R+ PG  L A + S D +D  N+
Sbjct: 5   RSWKIPTDVGGSINSSTTSANEVQQRSSPGMQLQAANSSSDDSDCSNQ 52


>AE014297-4663|AAF57085.1| 1105|Drosophila melanogaster CG12072-PA
           protein.
          Length = 1105

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 431 RTNSACRIASPPDAVTPPPEAFIKWRRSP 517
           R  +AC  A+PP  V P  +A++K RRSP
Sbjct: 201 RNPTACSAATPPPPVPPTSQAYVK-RRSP 228


>AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC,
           isoform C protein.
          Length = 2682

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 274 ILVDLVVHLLEIEHYQVGYFQQFINHRIVTTNKTVGVQ 387
           ++V LV+H L I  YQ  + Q  +NH  +T  + +G++
Sbjct: 287 VMVVLVLHSLSIVSYQTPWMQSHLNHTTLTA-RLIGLE 323


>AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB,
           isoform B protein.
          Length = 2720

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 274 ILVDLVVHLLEIEHYQVGYFQQFINHRIVTTNKTVGVQ 387
           ++V LV+H L I  YQ  + Q  +NH  +T  + +G++
Sbjct: 287 VMVVLVLHSLSIVSYQTPWMQSHLNHTTLTA-RLIGLE 323


>AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA,
           isoform A protein.
          Length = 2771

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 274 ILVDLVVHLLEIEHYQVGYFQQFINHRIVTTNKTVGVQ 387
           ++V LV+H L I  YQ  + Q  +NH  +T  + +G++
Sbjct: 287 VMVVLVLHSLSIVSYQTPWMQSHLNHTTLTA-RLIGLE 323


>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
            protein.
          Length = 4010

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 387  LDTNGFVRRYDPVIDELL 334
            LDT GF + +DP IDE++
Sbjct: 2104 LDTRGFSKEFDPCIDEIV 2121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,501,417
Number of Sequences: 53049
Number of extensions: 615427
Number of successful extensions: 2053
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2049
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)