Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0507.Seq
(730 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 29 0.11
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 2.4
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 2.4
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 24 5.5
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 24 5.5
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 24 5.5
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 24 5.5
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 24 5.5
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 23 7.3
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 23 7.3
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 23 7.3
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 23 7.3
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 29.5 bits (63), Expect = 0.11
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 406 NRCRNGSINRGLRGGADHL*HVQSGAKRYGDWSG 305
NRC NGS + ++H H S + G W+G
Sbjct: 1083 NRCSNGSCSSTSSSHSNHSSHSSSSSNSAGSWAG 1116
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 25.0 bits (52), Expect = 2.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 702 PLAKRTWWMSPPKRKP 655
P R WW+ PP +P
Sbjct: 101 PFGGRPWWLRPPFHRP 116
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 669 PKRKPCVKRGRKPLSPCAARRWR 601
P+R P + R +PCA RRW+
Sbjct: 229 PRRDPPINRQH---TPCAGRRWK 248
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 454 GAQSGAYRNLMPPDREN--RCRNGSINRGLRG 365
GA S +L P N RCRN + GL+G
Sbjct: 24 GASSSCNNSLNPRTPPNCARCRNHGLKIGLKG 55
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 454 GAQSGAYRNLMPPDREN--RCRNGSINRGLRG 365
GA S +L P N RCRN + GL+G
Sbjct: 24 GASSSCNNSLNPRTPPNCARCRNHGLKIGLKG 55
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 331 AKRYGDWSGTFAGEERRQVG 272
A R+ SGT AG RRQ+G
Sbjct: 468 ADRFVTLSGTAAGTHRRQLG 487
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 572 RLCGGDINNHRQRLAAH 622
+L GD+N RQ LA+H
Sbjct: 720 KLFAGDVNRSRQLLASH 736
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 227 WAKKRTLIIPSTLKSPDLPPLF 292
W K+R +++P KSP P F
Sbjct: 478 WKKQRLVLLPKPGKSPGEPSSF 499
Score = 23.0 bits (47), Expect = 9.7
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 675 SPPKRKPCVKRGRKPLSPC-AARRWR 601
SPP R +RG++P A RW+
Sbjct: 222 SPPTRDRAARRGQRPARVSKAGTRWK 247
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 454 GAQSGAYRNLMPPDREN--RCRNGSINRGLRG 365
GA S +L P N RCRN + GL+G
Sbjct: 24 GAASSCNNSLNPRTPPNCARCRNHGLKIGLKG 55
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 454 GAQSGAYRNLMPPDREN--RCRNGSINRGLRG 365
GA S +L P N RCRN + GL+G
Sbjct: 24 GAASSCNNSLNPRTPPNCARCRNHGLKIGLKG 55
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 192 VAADFPTVEALRQHMAAQSDRW 127
VA TV L Q MA DRW
Sbjct: 854 VACSEQTVATLEQQMAELHDRW 875
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
protein protein.
Length = 1881
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -2
Query: 558 CAYCRYSGGKTHLGSDPLCHPLMLSK 481
C Y + H G DP+ H L + K
Sbjct: 1431 CYYIVHGNEDGHFGLDPVSHDLTVEK 1456
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 858,623
Number of Sequences: 2352
Number of extensions: 19858
Number of successful extensions: 43
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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