Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0507.Seq
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46267-2|CAC42301.1| 600|Caenorhabditis elegans Hypothetical pr... 83 3e-16
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 33 0.28
U21322-7|AAA62545.1| 84|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 30 1.5
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.6
M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein ( C.ele... 29 4.5
M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein ( C.ele... 29 4.5
L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated p... 29 4.5
L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated p... 29 4.5
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 28 5.9
U80024-3|AAK18893.1| 342|Caenorhabditis elegans Seven tm recept... 28 7.9
>Z46267-2|CAC42301.1| 600|Caenorhabditis elegans Hypothetical
protein F49E2.1b protein.
Length = 600
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = -2
Query: 537 GGKTHLGSDPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAAL 358
G K PLCHP+ L V+ + E++++ + R +G TGVEMEALTA ++A L
Sbjct: 503 GAKQVANLIPLCHPIRLDFVDTVFNHDIENSKLHCISTARCSGNTGVEMEALTACTIALL 562
Query: 357 TIYDMCKAVQKDMVIGPVRLLAKSGGKS 274
T+YDMCKA+ + M++ + L+ KSGGK+
Sbjct: 563 TVYDMCKAISQKMMLTNIYLVHKSGGKT 590
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -2
Query: 264 KVEGMIKVLFFAQVCELVGTDATEVAADFPTVEALRQHMAAQSDR 130
K+ G + A VC++ TD E +FP+ +LRQHMA++ ++
Sbjct: 169 KIAGTKYEKYLAHVCKICKTDDGE-RLEFPSFMSLRQHMASRHEQ 212
>U21322-7|AAA62545.1| 84|Caenorhabditis elegans Hypothetical
protein K10D2.7 protein.
Length = 84
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2
Query: 249 IKVLFFAQVCELVGTDATEVAADFP 175
IKVLFF + C+LVG E A DFP
Sbjct: 4 IKVLFFGEACQLVG--KREEAIDFP 26
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 183 DFPTVEALRQHMAAQSDRWAWRWKMANYWLPSTRRW 76
D+P ++A+ ++Q DR W+ YW+ RW
Sbjct: 57 DWPRMDAVMPRFSSQLDRMDRNWRSDPYWMNLYPRW 92
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical protein
F41H10.3a protein.
Length = 1140
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 516 IPGAFCRLNTGNTRSGKYVAFVVATSIIIASVSLRM-VTKASARASRTVSALAETSTMCA 692
+P A R GN +S +YV ++ + ++A+ M T +S +S+ A +T+
Sbjct: 983 VPNAIKRREVGNLKSRQYVPWIANSRALVAAAMATMEETAEKMSSSPLLSSQAPMTTLMP 1042
Query: 693 SP 698
+P
Sbjct: 1043 TP 1044
>M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 429
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 168 QQLGNPQPLRLHLFPPT 218
Q +G+P+P R+HL PP+
Sbjct: 85 QDIGDPRPFRIHLSPPS 101
>M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 467
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 168 QQLGNPQPLRLHLFPPT 218
Q +G+P+P R+HL PP+
Sbjct: 85 QDIGDPRPFRIHLSPPS 101
>L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated
protein 86, isoform b protein.
Length = 467
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 168 QQLGNPQPLRLHLFPPT 218
Q +G+P+P R+HL PP+
Sbjct: 85 QDIGDPRPFRIHLSPPS 101
>L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated
protein 86, isoform a protein.
Length = 429
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 168 QQLGNPQPLRLHLFPPT 218
Q +G+P+P R+HL PP+
Sbjct: 85 QDIGDPRPFRIHLSPPS 101
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 217 LAHLGEKKNFNHPFHLKVTRLAAALRQQTY 306
L +KK H +K RLAA LR+QTY
Sbjct: 151 LKQFKDKKTIAHLRKIKSDRLAALLREQTY 180
>U80024-3|AAK18893.1| 342|Caenorhabditis elegans Seven tm receptor
protein 190 protein.
Length = 342
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/54 (24%), Positives = 21/54 (38%)
Frame = -3
Query: 314 LVRYVCWRRAAASRVTLRWKG*LKFFFSPRCASWWEQMQPKWLRISQLLKRYAS 153
+ RY C + ++ T W+ F WW + W R + + YAS
Sbjct: 105 IYRYGCIEKTFGTKCTSNWRFGFLFIVPLLYGVWWGTLVNIWWRANPDMDEYAS 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,530,159
Number of Sequences: 27780
Number of extensions: 418117
Number of successful extensions: 1070
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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