Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0506.Seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.4  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.4  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 427 DPSPSNLNLDTRISY 471
           DP    LNLDT+ SY
Sbjct: 136 DPDLKELNLDTKESY 150


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +1

Query: 367 LPHRFGKKGLTTHQTPTLNGDPSPSNLNLDTRISYTTFQXXXXXXXPSSKIRQLLHTKP 543
           L +RFG+       +  ++  P P   +  TR + TT         P++K   ++ TKP
Sbjct: 139 LSNRFGENEEADAASNVISSTPLPPTTSTTTRTTLTTKFTTKPSTKPTNK--PVVVTKP 195


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 533 IPNRRTVQPIQAEPTQNYFTPAQ 601
           +PN +TV PI+  P+     P +
Sbjct: 431 VPNGKTVIPIKISPSTANMVPQE 453


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 452 RLRFEGLGSPLSVGVWCVVRP 390
           RL   GLG+     VWC   P
Sbjct: 606 RLVARGLGAEAMWPVWCAQNP 626


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 541 VWYVGVDEFLSLVKDRGG 488
           +W V +D+FL L   + G
Sbjct: 351 IWTVDMDDFLGLCGPKNG 368


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +3

Query: 429 PQPFKSQPRYTHIVYNVPTAPPLSLTKLKNSSTPT 533
           P P +S P     V   PT PP      +   TP+
Sbjct: 78  PSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPS 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,578
Number of Sequences: 336
Number of extensions: 3279
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)