Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0505X.Seq
(443 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 139 9e-34
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 139 9e-34
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 139 9e-34
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 138 1e-33
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 138 2e-33
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 138 2e-33
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 138 2e-33
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 138 2e-33
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 137 3e-33
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 128 2e-30
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 128 2e-30
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 125 1e-29
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 88 2e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 76 1e-14
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 75 2e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 50 5e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 50 7e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 4e-05
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 32 0.20
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 30 0.61
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 30 0.61
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.4
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.8
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 28 2.5
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 3.3
At1g07970.1 68414.m00868 expressed protein 28 3.3
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 4.3
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 4.3
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 4.3
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 4.3
At5g07730.1 68418.m00886 expressed protein 27 5.7
At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative / anti... 27 5.7
At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative / anti... 27 5.7
At3g32904.1 68416.m04164 hypothetical protein 27 7.5
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 7.5
At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger) fa... 27 7.5
At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger) fa... 27 7.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.5
At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative / cel... 27 7.5
At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein sim... 26 10.0
At1g75080.2 68414.m08720 brassinosteroid signalling positive reg... 26 10.0
At1g75080.1 68414.m08719 brassinosteroid signalling positive reg... 26 10.0
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 139 bits (336), Expect = 9e-34
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFE FNS
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 126 bits (305), Expect = 5e-30
Identities = 56/68 (82%), Positives = 62/68 (91%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD+AQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 139 bits (336), Expect = 9e-34
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFE FNS
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 126 bits (305), Expect = 5e-30
Identities = 56/68 (82%), Positives = 62/68 (91%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD+AQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 139 bits (336), Expect = 9e-34
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFE FNS
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 126 bits (305), Expect = 5e-30
Identities = 56/68 (82%), Positives = 62/68 (91%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD+AQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 138 bits (335), Expect = 1e-33
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE FN+
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 128 bits (309), Expect = 2e-30
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD+AQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 138 bits (334), Expect = 2e-33
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE FN+
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 128 bits (309), Expect = 2e-30
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD+AQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 138 bits (334), Expect = 2e-33
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE FN+
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 128 bits (309), Expect = 2e-30
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD+AQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 138 bits (333), Expect = 2e-33
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFE FN+
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNA 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 128 bits (309), Expect = 2e-30
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD+AQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 138 bits (333), Expect = 2e-33
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFE FN+
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNA 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 128 bits (309), Expect = 2e-30
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD+AQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 137 bits (332), Expect = 3e-33
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE FN
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV 131
Query: 433 PAM 441
PAM
Sbjct: 132 PAM 134
Score = 128 bits (309), Expect = 2e-30
Identities = 58/68 (85%), Positives = 63/68 (92%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD+AQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 233 GILTLKYP 256
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 128 bits (308), Expect = 2e-30
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F
Sbjct: 73 PIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAF 132
Query: 433 PAM 441
P+M
Sbjct: 133 PSM 135
Score = 118 bits (285), Expect = 1e-27
Identities = 51/68 (75%), Positives = 63/68 (92%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKR 232
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGD+AQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 233 GILTLKYP 256
GIL+LKYP
Sbjct: 66 GILSLKYP 73
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 128 bits (308), Expect = 2e-30
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = +1
Query: 172 RDGRYGPERLLRG*QGPEQERYPHSEVPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 351
RDG P G +G + P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 352 VLLTEAPLNPKANREKMTQIMFENFNSPAM 441
VLLTEAP NPKANREKMTQIMFE+F+ PAM
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAM 123
Score = 70.1 bits (164), Expect = 6e-13
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +2
Query: 68 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKRGILTL 247
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG++ + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 248 KYP 256
K P
Sbjct: 59 KDP 61
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 125 bits (302), Expect = 1e-29
Identities = 52/65 (80%), Positives = 61/65 (93%)
Frame = +1
Query: 247 EVPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENF 426
+ P+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFE F
Sbjct: 25 DYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETF 84
Query: 427 NSPAM 441
P+M
Sbjct: 85 AVPSM 89
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 176 MVGMGQKDSYVGDKAQSKRGILTLKYP 256
MVGM + D +VGD A+++ GILTL YP
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYP 27
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 88.2 bits (209), Expect = 2e-18
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFN 429
P+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE +N
Sbjct: 71 PVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYN 129
Score = 56.8 bits (131), Expect = 6e-09
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDKAQS 226
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 227 KRGILTLKYP 256
R L + YP
Sbjct: 62 LRHQLDINYP 71
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 75.8 bits (178), Expect = 1e-14
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +1
Query: 232 RYPHSEV--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 405
R H EV PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 406 QIMFENFNSPAM 441
++MFE + PA+
Sbjct: 145 ELMFEKYKVPAL 156
Score = 57.2 bits (132), Expect = 5e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 154
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 74.9 bits (176), Expect = 2e-14
Identities = 31/63 (49%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFNS 432
PIEHG + +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FE FN
Sbjct: 89 PIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNV 148
Query: 433 PAM 441
P +
Sbjct: 149 PGL 151
Score = 35.9 bits (79), Expect = 0.012
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 65 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 151
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 61.7 bits (143), Expect = 2e-10
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 399
P + GI+T+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 60.9 bits (141), Expect = 4e-10
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV---GMGQKDSYVGDKAQ 223
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + +D+ DK +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 224 SKRGILT 244
KR + T
Sbjct: 65 GKRKLYT 71
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 50.4 bits (115), Expect = 5e-07
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFENFN 429
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFE FN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 65 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 157
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 50.0 bits (114), Expect = 7e-07
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENF 426
PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE+F
Sbjct: 64 PIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 68 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 160
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.4 bits (100), Expect = 4e-05
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = +2
Query: 68 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSKRGILTL 247
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S +
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPS-----MM 72
Query: 248 KYPSSTVSSP 277
KY T S P
Sbjct: 73 KYFDCTRSGP 82
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 PIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFENFN 429
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FE +
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 430 SPAM 441
PA+
Sbjct: 145 VPAV 148
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 31.9 bits (69), Expect = 0.20
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 426 EVLKHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 292
E L+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 757 ESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 30.3 bits (65), Expect = 0.61
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 15 PQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVA 158
P H+ S A + +MAP PVSP T+ PAP S V+
Sbjct: 181 PGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 30.3 bits (65), Expect = 0.61
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 426 EVLKHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 292
E L+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 757 ESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 405 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 298
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.8
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 165 WRGRPTMDGKTARGASSPAKPA--LHMPEPL 79
WR T G+ + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.0 bits (42), Expect(2) = 1.8
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -3
Query: 351 GVLLGGDTQLIVEGVVPDLLHVIPV 277
GV +GG + + E ++ D+ +P+
Sbjct: 18 GVGVGGGLESLPEDIIADIFSRLPI 42
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 206 VGDKAQSKRGILTLKYPSSTVSSPTGMTWRRSGTTPS 316
+ K SKR I T PSST+SSPT +G T S
Sbjct: 752 IHSKRHSKR-ISTSSQPSSTISSPTKEETSATGPTTS 787
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 171 PWWRGRPTMDG--KTARGASSPAKPALHM 91
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At1g07970.1 68414.m00868 expressed protein
Length = 693
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 158 PRHQGVMVGMGQKDSYVGDKAQSKRG--ILTLKYPSSTVSSPT 280
P H + G K S GDK S+ G I + PS + SP+
Sbjct: 178 PIHHQTLTGSAHKSSGGGDKLNSRNGSQISSFSTPSKQMGSPS 220
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 1 VNTSVPNTNTHKVQDVRRRCCCA 69
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 1 VNTSVPNTNTHKVQDVRRRCCCA 69
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.5 bits (58), Expect = 4.3
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = +2
Query: 50 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDKAQSK 229
+D ALV +C FAGD A AV SI G G+ G K S+ D QS
Sbjct: 32 NDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSF-ADAGQSA 88
Query: 230 RGILTLKYPSSTV 268
+ L S V
Sbjct: 89 KTFAVLSGVHSLV 101
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 75 STMAPACARPVSPATTRPAPSSRP 146
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At5g07730.1 68418.m00886 expressed protein
Length = 264
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 231 LLLWALSPT*ESFWPIPTITPWWRGRPTMDGKTARG 124
LL W S T SF+P+ I WW R K +G
Sbjct: 187 LLTW-FSKTIRSFYPVLAIAIWWWMRVRAPRKRVKG 221
>At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 432 GVEVLKHDLGHLLPVGLGV--EGGFGEQHGVLLGGDTQLIVEGVVPDLLHVI 283
G+EV+K G +L G V EG F E + + D ++ E + +L+V+
Sbjct: 354 GIEVIKSQGGKILTGGKAVEGEGNFVEPTIIEISADAAVVKEELFAPVLYVL 405
>At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 432 GVEVLKHDLGHLLPVGLGV--EGGFGEQHGVLLGGDTQLIVEGVVPDLLHVI 283
G+EV+K G +L G V EG F E + + D ++ E + +L+V+
Sbjct: 354 GIEVIKSQGGKILTGGKAVEGEGNFVEPTIIEISADAAVVKEELFAPVLYVL 405
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 213 SPT*ESFWPIPTITPWWRGRPTMDGKTARGASSPAKPALHMP 88
SP+ W IP TP W G P+ + +SSP P L P
Sbjct: 288 SPSNVPQWTIPPTTPQW-GTPS---SMPQWSSSPTAPQLSSP 325
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 53 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 178
+D+ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At2g37150.2 68415.m04558 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 188 GQKDSYVGDKAQSKRGILTLKYPSSTVSSPTGMTWRRSGTTP 313
G + +V + + ++T YPS + P ++W RSG P
Sbjct: 350 GSRSGHVASSSGDRSHLVTETYPSRHLRPPPHISW-RSGDRP 390
>At2g37150.1 68415.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 546
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 188 GQKDSYVGDKAQSKRGILTLKYPSSTVSSPTGMTWRRSGTTP 313
G + +V + + ++T YPS + P ++W RSG P
Sbjct: 350 GSRSGHVASSSGDRSHLVTETYPSRHLRPPPHISW-RSGDRP 390
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 223 EQERYPHSEVPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 402
EQE Y E+ NW +E + + + + P LL EA + PK+ E
Sbjct: 470 EQEEYTREEI--------NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETF 521
Query: 403 TQIMFENF 426
Q M++ +
Sbjct: 522 AQKMYQTY 529
>At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa] (Plant Mol. Biol.
40, 323-332 (1999))
Length = 620
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 127 GRVVAGETGLAHAGAIVDYKRSNIVVAHLEL 35
G +AGET A A A + ++RSN V + L L
Sbjct: 169 GSDLAGETAAAMAAASIVFRRSNPVYSRLLL 199
>At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein
similar to endo-beta-1,4-glucanase GI:4972236 from
[Fragaria x ananassa]
Length = 525
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 139 EDGAGRVVAGETGLAHAGAIVDYKRSNIVVAHLEL 35
E+ G +AGET A A A + ++ +N +HL L
Sbjct: 179 ENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLL 213
>At1g75080.2 68414.m08720 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 218 AQSKRGILTLKYPSSTVSSPTGMTWRRSGTTPSTM 322
A +K+ + + YP VS+P T R TP+T+
Sbjct: 203 AIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATI 237
>At1g75080.1 68414.m08719 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 218 AQSKRGILTLKYPSSTVSSPTGMTWRRSGTTPSTM 322
A +K+ + + YP VS+P T R TP+T+
Sbjct: 203 AIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATI 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,373,340
Number of Sequences: 28952
Number of extensions: 231824
Number of successful extensions: 864
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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