Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0504.Seq
(537 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 7e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 7e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 183 7e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 183 7e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 7e-47
SB_54| Best HMM Match : Actin (HMM E-Value=0) 105 2e-23
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 91 7e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 78 4e-15
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 9e-15
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 62 3e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 47 8e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 44 6e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 43 2e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 36 0.016
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 31 0.60
SB_36221| Best HMM Match : Rz1 (HMM E-Value=1.2) 31 0.79
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.79
SB_15225| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.0
SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28) 26 1.7
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 1.8
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 3.2
SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026) 28 4.2
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 28 4.2
SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04) 28 4.2
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 28 4.2
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 28 5.6
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 28 5.6
SB_53274| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 5.6
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 5.6
SB_34438| Best HMM Match : Ribosomal_L23eN (HMM E-Value=2) 28 5.6
SB_28771| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 5.6
SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 5.6
SB_49188| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_45177| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_56590| Best HMM Match : Pox_A32 (HMM E-Value=6.1) 27 9.7
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05) 27 9.7
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 27 9.7
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 9.7
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_36025| Best HMM Match : LHC (HMM E-Value=2.9) 27 9.7
SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 9.7
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 183 bits (446), Expect = 7e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTGIV+ S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDS 156
Score = 75.8 bits (178), Expect = 2e-14
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (446), Expect = 7e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTGIV+ S
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMDS 155
Score = 75.8 bits (178), Expect = 2e-14
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 36
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 183 bits (446), Expect = 7e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTGIV+ S
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMDS 155
Score = 74.1 bits (174), Expect = 6e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 36
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 183 bits (446), Expect = 7e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTGIV+ S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDS 156
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (446), Expect = 7e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTGIV+ S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDS 156
Score = 78.6 bits (185), Expect = 3e-15
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 105 bits (252), Expect = 2e-23
Identities = 48/69 (69%), Positives = 58/69 (84%)
Frame = +2
Query: 299 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 478
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 479 ASGRTTGIV 505
ASGRTTG V
Sbjct: 2189 ASGRTTGTV 2197
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/48 (50%), Positives = 32/48 (66%)
Frame = +1
Query: 16 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVG
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVG 2125
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 103 bits (246), Expect = 1e-22
Identities = 44/87 (50%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 433
P+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE +
Sbjct: 73 PMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQ 132
Query: 434 SPAMYVAIQAVLSLYASGRTTGIVLTS 514
+Y+AIQAVL+LYA G TG+V+ S
Sbjct: 133 FEGVYIAIQAVLTLYAQGLLTGVVIDS 159
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 67 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
+ +V DNG+G K G+AG + P +FPS+VG
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVG 37
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 90.6 bits (215), Expect = 7e-19
Identities = 38/54 (70%), Positives = 49/54 (90%)
Frame = +2
Query: 347 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 508
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VL
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVL 179
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 78.2 bits (184), Expect = 4e-15
Identities = 33/86 (38%), Positives = 57/86 (66%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PA ++ +VL+ +A+GR+ G+V+ S
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDS 88
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 77.0 bits (181), Expect = 9e-15
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVG 36
Score = 70.5 bits (165), Expect = 8e-13
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +2
Query: 392 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLTS 514
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+ S
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS 118
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
Score = 44.0 bits (99), Expect = 8e-05
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTF 319
PIEHGI+TNWDDMEKI TF
Sbjct: 70 PIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2
Query: 413 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLTS 514
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V S
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDS 34
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 47.2 bits (107), Expect = 8e-06
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 73 LVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
LV+D GS M K GFAGDDAP+ VFP IVG
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVG 1387
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = -1
Query: 153 DGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 55
DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 7 DGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +1
Query: 10 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGS 162
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG+
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGN 732
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 364
PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 302 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 481
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 482 SGRTTGIV 505
+GIV
Sbjct: 572 YSAVSGIV 579
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 67 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGSL 165
+ +++D GS KAGFA ++A + + S++G L
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGIL 514
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 36.3 bits (80), Expect = 0.016
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 131 PAPSSRPSWVASPPGRDGRYGPERLL--RGIRGPEQDRYPQSEDPIE--HGIITNWDDME 298
P P P P G G GPE + +GIRGPE + PQ +E G++ WD+
Sbjct: 122 PGPQGPPG-PQGPTGAKGDQGPEGIQGPQGIRGPEGPQGPQGPQGLEGKAGVVKYWDEKH 180
Query: 299 K 301
+
Sbjct: 181 R 181
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.34
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 44 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 148
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 31.1 bits (67), Expect = 0.60
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 377 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLTSEMV 523
+ PK ++ ++F F P M +A++ + A+G TGI+ T V
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGIIFTERHV 222
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 31.1 bits (67), Expect = 0.60
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 131 PAPSSRPSWVASPPGR---DGRYGPERLLRG 214
P+ +SRP W+ PPG +G PER RG
Sbjct: 775 PSGASRPDWIECPPGSYCGEGSGAPERCPRG 805
>SB_36221| Best HMM Match : Rz1 (HMM E-Value=1.2)
Length = 205
Score = 30.7 bits (66), Expect = 0.79
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 107 PVSPATTRPAPSSRPSWVASPPGRDGRYGPERLLRGIRGPEQD-RYPQSEDPIEHGII 277
P P T RP P R W+ P D + E L+ + E D Y +S+ + G I
Sbjct: 37 PAFPQTHRPRPRPRDYWIGEQPENDDNF-MEELMDAMSHSETDVTYDESKRGLPPGAI 93
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.79
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 389 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 505
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_15225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 30.7 bits (66), Expect = 0.79
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -3
Query: 523 HHLRSEHDTGGTTG-GVQREHGLNGDVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQHG 353
H R +H GG G G+ R G + GGG+ G G + G+G G GE G
Sbjct: 17 HGWRGQHSRGGMAGEGMGRGGIAGGRMGGGGMAGEGMGRGGMAGEGMGGGGMAGEGMG 74
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 148
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNE 328
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 64 VAALVVDNGSGMCKAGFAGDDAPRAV 141
+A LV+D G+ K GFA + APR++
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI 258
>SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28)
Length = 834
Score = 26.2 bits (55), Expect(2) = 1.7
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 113 SPATTRPAPSSRPSWVASPPGRDGRYGPERLLRGI-RGPEQD 235
SP T+P PSS V PP R + P RL R I R P D
Sbjct: 529 SPLATKP-PSSA-GHVNPPPSRPQTHHPSRLPRKISRDPSTD 568
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 212 GIRGPEQDRYPQSEDPIEHGIITNW 286
G+R P QD YP D +W
Sbjct: 596 GMRFPRQDSYPTGYDADLESSTRSW 620
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 35 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 148
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 400
P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 134 PFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -3
Query: 529 GRHHLRSEHDTGGTT---GGVQREHGLNGDVHGG 437
GR H + D GGT GG R+HG G HGG
Sbjct: 45 GRDHGGTGRDHGGTGRDHGGTGRDHGGTGRDHGG 78
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = -3
Query: 526 RHHLRSEHDTGGTT---GGVQREHGLNGDVHGGGVEGLKHDLGHLLPVGLGVE-GGFGEQ 359
R H + D GGT GG +R+HG HGG G H G G + GG G
Sbjct: 4 RDHGSTRRDHGGTGRDHGGTRRDHGGTRRDHGG--TGRDHGGTGRDHGGTGRDHGGTGRD 61
Query: 358 HG 353
HG
Sbjct: 62 HG 63
Score = 28.7 bits (61), Expect = 3.2
Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = -3
Query: 526 RHHLRSEHDTGGTT---GGVQREHGLNGDVHGGGVEGLKHDLGHLLPVGLGVE-GGFGEQ 359
R H + D GGT GG R+HG G HGG G H G G + GG G
Sbjct: 25 RDHGGTRRDHGGTGRDHGGTGRDHGGTGRDHGG--TGRDHG-------GTGRDHGGTGRD 75
Query: 358 HG 353
HG
Sbjct: 76 HG 77
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 29 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS--WVASPPG 175
K T ++ ATT +T PA P P TT P ++ P+ +PPG
Sbjct: 77 KPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPG 127
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 29 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRP--SWVASPP 172
K T ++ ATT + +T PA P P TT P ++ P S +PP
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 29 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 154
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026)
Length = 197
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -1
Query: 531 VEDTISEVSTIPVVRPEAYSESTA*MATYMAGELKVSNMIWVIFSLL 391
V T+ + VV + Y + +ATY+ L VSN++ V+ +L
Sbjct: 17 VVTTLGNAVVVVVVYKDPYKQLKKNLATYLIAGLAVSNLLLVVGEIL 63
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 44 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 148
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -3
Query: 493 GTTGGVQREHGLNGDVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQHG 353
GT GG Q G +G + GGG+ G G P GFG G
Sbjct: 629 GTPGGQQS--GFHGGIGGGGMGGGFSGQGGGFPTSQAQADGFGTSQG 673
>SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04)
Length = 1223
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 71 RL*STMAPACARPVSPATTRPAPSSRPSWVASPPGR 178
R+ + CARP P TT+ A + PS V PGR
Sbjct: 758 RVTGSTTEVCARPF-PTTTKAATPAIPSSVKGSPGR 792
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSS----RPSWVASPPGRDGRYGPERLLRGIRGPEQDR 238
S +A ARPV+P P P + P V + P R+ P R RG+ PE+ R
Sbjct: 758 SVVAMPAARPVTPKPVTPKPVTPKPVTPKPVTTRPVEAVRHSPRR-DRGVVPPEKKR 813
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 251 EDPIEHGIITNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN 382
E +E G W+D+ + HTF +L + A E +P L+E PLN
Sbjct: 45 EVKLEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLN 87
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 104 RPVSPATTRPAPSSRPSWVASPPGRDGRYGPERLLRGIRGPEQDRYP 244
+P P PAP P PPG DG G L G +GP+ + P
Sbjct: 1651 QPWYPVFHYPAPPPPPPPAPGPPGPDGPMG----LPGPQGPDGPKGP 1693
>SB_53274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 203 LLRGIRGPEQDRYPQSEDPIEHGIITNWDDMEKIWHHTFYNELR--VAPEEHPVLLTEAP 376
L RGI + + DP HGIIT+ +D +KI+ + ++ +H +EA
Sbjct: 299 LHRGITDDIGESFINKPDPKIHGIITSSNDEKKIFWRSPSRRIKRQEKSSQHMHHASEAQ 358
Query: 377 LNPK 388
L P+
Sbjct: 359 LEPR 362
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPAT 124
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPAT 124
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_34438| Best HMM Match : Ribosomal_L23eN (HMM E-Value=2)
Length = 772
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 131 PAPSSRPSWVASPPGRDGRYGPERLLRGIRGPEQDRYPQSEDPIEHG 271
P+ P+ +ASP G YGP G P DR+ Q + P G
Sbjct: 601 PSQGYTPNRLASPSG----YGPSDSRPGSSQPGMDRFGQGQKPSRFG 643
>SB_28771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3
Query: 502 DTGGTTGGVQREHGLNGDVHGGG 434
D GG GGV E G +GDV GGG
Sbjct: 46 DDGGD-GGVDCERGGDGDVDGGG 67
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPAT 124
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_4780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -2
Query: 254 LQIEDTCLALGLVSHVGVFLAHTDHHALVARLPTMDGKTARGASS 120
L+ T +LGL G L D P +DGK ARG +S
Sbjct: 247 LRNRGTSRSLGLTKTRGKILERFDKKLATTGRPLLDGKEARGKAS 291
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRPSWVASPPGRDG 184
+T P P++PA T PAP+ P ASPP G
Sbjct: 160 ATGGPPPPPPIAPAATVPAPAV-PLAAASPPPPSG 193
>SB_49188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 716
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 89 APACAR-PVSPATTRPAPSSRPSWVAS 166
A ACAR P P+ P P S +W AS
Sbjct: 607 AKACARAPKMPSAHTPVPESNSAWSAS 633
>SB_45177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 143 SRPSWVASPPGRD--GRYGPERLLRGIRGPEQDRYPQSEDPIEHGIITNWDDMEKIWH 310
S+ SW + G+ + P+ +R EQD P S+ + +IT DD+ K+WH
Sbjct: 563 SKFSWCVTDEGKQQLSKLLPQYYTILLRQIEQD--PMSKSSFD-ALITATDDLSKMWH 617
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 46 KMCDDDVAALVVDNG-SGMCKAGFAGD 123
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_56590| Best HMM Match : Pox_A32 (HMM E-Value=6.1)
Length = 740
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 89 APACAR-PVSPATTRPAPSSRPSWVAS 166
A ACAR P P+ P P S +W AS
Sbjct: 502 ARACARAPKMPSAHTPVPESNSAWSAS 528
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 146 GKTARGASSPAKPALHMPEP 87
G T R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05)
Length = 1081
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 89 APACAR-PVSPATTRPAPSSRPSWVAS 166
A ACAR P P+ P P S +W AS
Sbjct: 716 ARACARAPKMPSAHTPVPESNSAWSAS 742
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 27.1 bits (57), Expect = 9.7
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 20 PQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSR-PSWVASPPGRDGRYGP 196
P+ + R M+++ + PA + PV +PA + V +PP R P
Sbjct: 267 PESPKEEKPRTWAAMVIQ--PSPTPAGSAPVVKPAPKPAQQTHIGQMVQTPPPRPQPQRP 324
Query: 197 ERLLRGIRGPEQDR 238
R G GP DR
Sbjct: 325 PRAGPGTAGPAPDR 338
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 44 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 148
S C T+++R T+ APA P SPAT P R
Sbjct: 51 SSCLATLVVRPLETIPAPAPTTPTSPATPASGPPIR 86
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPAT 124
S C T L+R L +T APA P SPAT
Sbjct: 523 SSCLATFLVRTLETTPAPAPTTPTSPAT 550
>SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 263 RWGLQIEDTCLALGLVSHVGVFLAH 189
RW L++ TCL L ++ H+G L H
Sbjct: 446 RWELRLT-TCLELSVIEHIGPQLMH 469
>SB_36025| Best HMM Match : LHC (HMM E-Value=2.9)
Length = 671
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 89 APACAR-PVSPATTRPAPSSRPSWVAS 166
A ACAR P P+ P P S +W AS
Sbjct: 421 ARACARAPKMPSAHTPVPESNSAWSAS 447
>SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 754
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 89 APACAR-PVSPATTRPAPSSRPSWVAS 166
A ACAR P P+ P P S +W AS
Sbjct: 570 ARACARAPKMPSAHTPVPESNSAWSAS 596
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 146 GKTARGASSPAKPALHMPEP 87
G T R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,767,626
Number of Sequences: 59808
Number of extensions: 395472
Number of successful extensions: 2239
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2216
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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