Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0504.Seq
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 183 8e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 183 8e-47
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 182 1e-46
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 182 1e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 182 1e-46
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 182 1e-46
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 182 1e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 182 1e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 182 1e-46
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 182 1e-46
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 178 2e-45
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 132 1e-31
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 106 9e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 94 7e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 86 1e-17
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 83 1e-16
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 83 1e-16
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 81 4e-16
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 81 4e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.011
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.011
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.13
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 31 0.53
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 31 0.69
AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical... 31 0.69
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.69
Z81058-3|CAB62800.1| 345|Caenorhabditis elegans Hypothetical pr... 30 0.92
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 28 3.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 3.7
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 28 3.7
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 28 3.7
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 28 3.7
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 3.7
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 4.9
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 4.9
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 4.9
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 4.9
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 4.9
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 4.9
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 4.9
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 4.9
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 27 6.5
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 27 6.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 27 6.5
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 8.6
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 8.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 27 8.6
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 8.6
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 8.6
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 8.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 27 8.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 183 bits (445), Expect = 8e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTGIVL S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDS 156
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 183 bits (445), Expect = 8e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTGIVL S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDS 156
Score = 81.4 bits (192), Expect = 4e-16
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTG+VL S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTG+VL S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTG+VL S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTG+VL S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTG+VL S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 27 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 86
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTG+VL S
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLDS 112
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3
Query: 180 MVGMGQKDSYVGYEAQSKTGILNLKTP 260
MVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYP 27
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 57 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTG+VL S
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDS 142
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 57
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 103 KAGFAGDDAPRAVFPSIVG 159
+AGFAGDDAPRAVFPSIVG
Sbjct: 5 RAGFAGDDAPRAVFPSIVG 23
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLTS 514
PAMYVAIQAVLSLYASGRTTG+VL S
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDS 156
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 178 bits (434), Expect = 2e-45
Identities = 82/93 (88%), Positives = 88/93 (94%), Gaps = 1/93 (1%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNT 129
Query: 437 PAMYVAIQAVLSLYASGRTTGIVL-TSEMVSST 532
PAMYV IQAVLSLYASGRTTGIVL T + V+ T
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT 162
Score = 72.1 bits (169), Expect = 2e-13
Identities = 31/35 (88%), Positives = 35/35 (100%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 36
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 132 bits (320), Expect = 1e-31
Identities = 58/89 (65%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = +2
Query: 251 EDPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 427
E P+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 428 FNSPAMYVAIQAVLSLYASGRTTGIVLTS 514
FN PA+Y+ +QAVLSLYA+GRTTG+VL S
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDS 159
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Frame = +1
Query: 55 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
D DV A +V+DNGSG+ KAGFAG+ P+ F + VG
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVG 39
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 106 bits (255), Expect = 9e-24
Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 433
P+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE +
Sbjct: 73 PMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYG 132
Query: 434 SPAMYVAIQAVLSLYASGRTTGIVLTS 514
++YVA+QAVL+LYA G TG+V+ S
Sbjct: 133 FNSIYVAVQAVLTLYAQGLLTGVVVDS 159
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 73 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGSLATRA 177
+VVDNG+G K G+AG + P +FPS+VG R+
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRS 43
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.9 bits (223), Expect = 7e-20
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 436
PI HGI+ +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FN
Sbjct: 84 PIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNV 143
Query: 437 PAMYVAIQAVLSLYAS 484
P +Y+A+QAVL+L AS
Sbjct: 144 PGLYIAVQAVLALTAS 159
Score = 35.5 bits (78), Expect = 0.024
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 156
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 86.2 bits (204), Expect = 1e-17
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +2
Query: 251 EDPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 430
E ++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F
Sbjct: 91 ESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKF 150
Query: 431 NSPAMYVAIQAVLSLYASGRTTGIVLTS 514
PA Y++ VLS +A GRT G+++ S
Sbjct: 151 QVPAYYLSKNVVLSCFAQGRTHGLMVDS 178
Score = 33.9 bits (74), Expect = 0.075
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 156
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Score = 40.3 bits (90), Expect = 9e-04
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKI 304
PIEHGI+TNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Score = 34.7 bits (76), Expect = 0.043
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDM 295
PIEHGI+TNWDDM
Sbjct: 71 PIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Score = 40.3 bits (90), Expect = 9e-04
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKI 304
PIEHGI+TNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 159
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 37
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +3
Query: 162 PRHQGVMVGMGQKDSYVGYEAQSKTGILNLKTP 260
PRHQGVMVGMGQKDSYVG EAQSK GIL LK P
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Score = 40.3 bits (90), Expect = 9e-04
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKI 304
PIEHGI+TNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 430
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 257 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 430
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.13
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRPSWVASPPGRDGRY 190
+T AP PATTRPAP+S+P V P D Y
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQPP-VREPETPDSGY 352
Score = 30.3 bits (65), Expect = 0.92
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +2
Query: 101 ARPVSPATTRPAPSSR---PSWVASPPGRDGRYGPERL--LRGIRGPE-QDRYPQSE 253
A +S ATT P P A PPG DG GPE L+G GP +D P E
Sbjct: 121 ASGISLATTHDIPGGCIKCPEGPAGPPGPDGDSGPEGFPGLQGQSGPSGEDGAPGQE 177
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSS-RPSWVASPPGRD 181
+T AP R PATTR P++ RP+ + PP R+
Sbjct: 311 ATRAPPATR-APPATTRAPPATTRPAPASQPPVRE 344
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.1 bits (67), Expect = 0.53
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 326 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 505
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 506 L-TSEMVSSTP 535
+ E V+ P
Sbjct: 326 VDIGERVNIVP 336
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 30.7 bits (66), Expect = 0.69
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 511 SEHDTGGTTGGVQREHGLNGDVHGGG 434
S H GG GG HG G HGGG
Sbjct: 185 SHHHGGGGGGGGHHHHGGGGHYHGGG 210
>AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical
protein Y59A8B.26 protein.
Length = 258
Score = 30.7 bits (66), Expect = 0.69
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 496 GGTTGGVQREHGLNGDVHG---GGVEGLKHDLGHLLPVGLGVEGGFGEQHGVLLGGDT 332
GG TGG+ G+ G G G + GL +G L G GG G G+ LGG T
Sbjct: 129 GGATGGLGGLSGILGGATGGATGALGGLTGTVGGLTNALEGATGGLGGLSGI-LGGAT 185
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 493 GTTGGVQREHGLNGDVHGGG---VEGLKHDLGHLLPVGLGVEGGFGEQHGVLLG 341
G TGG+ G+ G GG + GL +G L G GG G G+L G
Sbjct: 169 GATGGLGGLSGILGGATGGATGALGGLTGTVGGLTNALGGATGGLGGLSGILGG 222
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 0.69
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 107 PVSPATTRPAPSSRPSWVASPPGRDGRYGP 196
P++P +P P P A PPG DG GP
Sbjct: 131 PLTPPPCKPCPEGPPG-PAGPPGPDGNKGP 159
>Z81058-3|CAB62800.1| 345|Caenorhabditis elegans Hypothetical
protein F11E6.3 protein.
Length = 345
Score = 30.3 bits (65), Expect = 0.92
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = +2
Query: 101 ARPVSPATTRPAPSSRPSWVASPPGRDGRYGPERLLRGIRGPE------QDRYPQSEDPI 262
A P +PA T P P ++ P +D Y +R + G E ++ P +E P+
Sbjct: 45 AEPSAPAETAPEPVAQEETAPEAPAQDAGYRSKRQAQNSYGDEAAAPAVEESAPAAEQPV 104
Query: 263 E 265
E
Sbjct: 105 E 105
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = -1
Query: 222 PRIPRRS---LSGPYRPSRPGGEATHDGRED 139
PRIP S S P+RP+RP G +DG ED
Sbjct: 258 PRIPEPSPVIKSRPFRPNRPFGR-LNDGEED 287
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 107 PVSPATTRPAPSSRPSWVASPPGRDGRYG 193
PV P +P P RP PPGR G G
Sbjct: 143 PVVPTPCKPCPGGRPG-PPGPPGRPGSDG 170
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 28.3 bits (60), Expect = 3.7
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = -3
Query: 511 SEHDTGGTTGGVQREHGLNGDVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQHGVLLG 341
S+ GG GG + G G GG G G G +GGFG Q G G
Sbjct: 49 SQQGFGGMQGGFGGQSGFGGGSSQGGFGGFGQQGGF----GGNSQGGFGGQQGGFSG 101
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 481 GVQREHGLNGDVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 365
G + E G++G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 131 PAPSSRPSWVASPPGRDGRYGPERLLRGIRGPEQDRYPQSEDPI 262
P P +P PPG G GP +G+ GP+ D +D +
Sbjct: 145 PGPPPKPPCQKCPPGPPGPAGPPG-PKGLPGPQGDAGTSGQDGV 187
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 222 AQSKTGILNLKTPSSTVSSPTGMTWRRSGTTPSTMSCV 335
A S + + KT +S SPT T SGTT S S V
Sbjct: 658 APSTSTSVQTKTTTSPTKSPTSTTITTSGTTTSATSSV 695
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 481 GVQREHGLNGDVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 365
G + E G++G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 481 GVQREHGLNGDVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 365
G + E G++G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 3.7
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -3
Query: 529 GRHHLRSEHDTGGTTGGVQREHGLNGDVHGGGVEGLKHDL---GHLLPVGLGVEGGFGEQ 359
G HH + H G HG +G GV H+ GH P G G G
Sbjct: 553 GSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVH 612
Query: 358 HG 353
HG
Sbjct: 613 HG 614
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRPSWVASPP 172
ST +PA PV P P P P + +PP
Sbjct: 958 STRSPALPPPVPPREAPPIPKRNPPPLGAPP 988
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = +2
Query: 107 PVSPATTRPAPSSRPSWVASPPGRDGRYGPERLLRGIRGPEQDRYPQSE 253
PV PA PA P PPG G GP G RGP PQ E
Sbjct: 145 PVGPAG--PAGGPGPKGPPGPPGGHGEPGPAG-RGGPRGPPGPGGPQGE 190
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 92 PACARPVSPATTRPAPSSRPSWVASPPGRDGRYGP 196
PA + P++P A + P+ PPG G GP
Sbjct: 211 PAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGP 245
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRPSWVASPP 172
ST +PA PV P P P P + +PP
Sbjct: 958 STRSPALPPPVPPREAPPIPKRNPPPLGAPP 988
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRPSWVASPP 172
ST +PA PV P P P P + +PP
Sbjct: 958 STRSPALPPPVPPREAPPIPKRNPPPLGAPP 988
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 92 PACARPVSP-ATTRPAPSSRPSWVASPPGRDGRYGPE 199
P A P A +P+P+ P PPG+DG GP+
Sbjct: 244 PGPAGPAGEDAYAQPSPAGTPG-PPGPPGKDGEAGPD 279
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 71 RL*STMAPACARPVSPATTRPAPSSRPSWVA 163
RL S +AP A P S A TR APS + VA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVA 261
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 92 PACARPVSPATTRPAPSSRPSWVASPPGRDGRYGP 196
PA + P++P A + P+ PPG G GP
Sbjct: 211 PAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGP 245
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 529 GRHHLRSEHDTGGTTGGVQREHGLNGDVHGGGVEGLKHD 413
G H +EHD G + GG HG + G HD
Sbjct: 385 GHSHDHNEHDHGHSHGGNNDNHGHSHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 529 GRHHLRSEHDTGGTTGGVQREHGLNGDVHGGGVEGLKHD 413
G H +EHD G + GG HG + G HD
Sbjct: 403 GHSHDHNEHDHGHSHGGNNDNHGHSHSAGSDNHHGHSHD 441
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -3
Query: 496 GGTTGGVQREHGLNGDVHGGGVEGL--KHDLGHLLPVGLGVEGGFG 365
GG GG G G V GGG G H GH VG G GG G
Sbjct: 81 GGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGG 126
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 92 PACARPVSPATTRPAPSSRPSWVASPPGRDGRYGP 196
PA + P++P S P PPG G GP
Sbjct: 209 PAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGP 243
>Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical
protein C35A5.10 protein.
Length = 286
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 201 DSYVGYEAQSKTGILNLKTPSSTVSSPTGMTWRRSGTTPSTMSCV 335
+ Y+ Y AQ TG + P+G R +G PS SCV
Sbjct: 168 NQYLPYGAQQFTGTYQNGQFFCGATEPSGGVCRNNGVCPSGHSCV 212
>Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical
protein F14E5.4 protein.
Length = 408
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 233 DRYPQSEDPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVL-LTEAPLNPKANR 397
D+YP+ I I W D K + FY + + E+H ++ +T+ N K R
Sbjct: 303 DKYPEYNSMI---IFETWKDNGKYFVKVFYKKEEITAEDHELIDVTKFVRNCKRER 355
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -1
Query: 243 GYLSCSGPRIPRRSLSGPYRPSRPGGEATHDGREDGAGRVVAGETGLAHAGAI 85
GY GP P + GP P PG E + D + G G++ I
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGI 439
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -1
Query: 243 GYLSCSGPRIPRRSLSGPYRPSRPGGEATHDGREDGAGRVVAGETGLAHAGAI 85
GY GP P + GP P PG E + D + G G++ I
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGI 438
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 92 PACARPVSPATTRPAPSSRPSWVASPPGRDGRYGP 196
PA + P++P S P PPG G GP
Sbjct: 204 PAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGP 238
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -1
Query: 243 GYLSCSGPRIPRRSLSGPYRPSRPGGEATHDGREDGAGRVVAGETGLAHAGAI 85
GY GP P + GP P PG E + D + G G++ I
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGI 438
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -1
Query: 243 GYLSCSGPRIPRRSLSGPYRPSRPGGEATHDGREDGAGRVVAGETGLAHAGAI 85
GY GP P + GP P PG E + D + G G++ I
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGI 439
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -1
Query: 243 GYLSCSGPRIPRRSLSGPYRPSRPGGEATHDGREDGAGRVVAGETGLAHAGAI 85
GY GP P + GP P PG E + D + G G++ I
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKGDGGIPGAPGVSGPSGI 475
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 92 PACARPVSPATTRPAPSSRPSWVASPPGRDGRYGP 196
PA + P++P S P PPG G GP
Sbjct: 204 PAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGP 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,556,248
Number of Sequences: 27780
Number of extensions: 284719
Number of successful extensions: 1521
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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