Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0503X.Seq
         (514 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050677-1|AAH50677.1|  585|Homo sapiens proline rich 14 protein.      31   1.8  
BC021934-1|AAH21934.1|  585|Homo sapiens PRR14 protein protein.        31   1.8  
BC010232-1|AAH10232.1|  558|Homo sapiens PRR14 protein protein.        31   1.8  
BC000119-1|AAH00119.1|  585|Homo sapiens proline rich 14 protein.      31   1.8  
AK074783-1|BAC11207.1|  585|Homo sapiens protein ( Homo sapiens ...    31   1.8  

>BC050677-1|AAH50677.1|  585|Homo sapiens proline rich 14 protein.
          Length = 585

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = -1

Query: 487 RTARETVXXXXXXXXXXXASESIRPEANRVETVGVTVIMITSCSTTAPISASRPWSRRLG 308
           R  R TV               +R E   +  VG +  + TSCS+TA  S S P   RLG
Sbjct: 358 RPRRHTVGGGEMARAPPPPRPCLRKEVFPLGGVGASPSLTTSCSSTASTSFSEPAEPRLG 417

Query: 307 VKAPSGAKAYTGTVIS 260
                  +A    V+S
Sbjct: 418 STKGKEPRASKDQVLS 433


>BC021934-1|AAH21934.1|  585|Homo sapiens PRR14 protein protein.
          Length = 585

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = -1

Query: 487 RTARETVXXXXXXXXXXXASESIRPEANRVETVGVTVIMITSCSTTAPISASRPWSRRLG 308
           R  R TV               +R E   +  VG +  + TSCS+TA  S S P   RLG
Sbjct: 358 RLRRHTVGGGEMARAPPPPRPCLRKEVFPLGGVGASPSLTTSCSSTASTSFSEPAEPRLG 417

Query: 307 VKAPSGAKAYTGTVIS 260
                  +A    V+S
Sbjct: 418 STKGKEPRASKDQVLS 433


>BC010232-1|AAH10232.1|  558|Homo sapiens PRR14 protein protein.
          Length = 558

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = -1

Query: 487 RTARETVXXXXXXXXXXXASESIRPEANRVETVGVTVIMITSCSTTAPISASRPWSRRLG 308
           R  R TV               +R E   +  VG +  + TSCS+TA  S S P   RLG
Sbjct: 331 RPRRHTVGGGEMARAPPPPRPCLRKEVFPLGGVGASPSLTTSCSSTASTSFSEPAEPRLG 390

Query: 307 VKAPSGAKAYTGTVIS 260
                  +A    V+S
Sbjct: 391 STKGKEPRASKDQVLS 406


>BC000119-1|AAH00119.1|  585|Homo sapiens proline rich 14 protein.
          Length = 585

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = -1

Query: 487 RTARETVXXXXXXXXXXXASESIRPEANRVETVGVTVIMITSCSTTAPISASRPWSRRLG 308
           R  R TV               +R E   +  VG +  + TSCS+TA  S S P   RLG
Sbjct: 358 RPRRHTVGGGEMARAPPPPRPCLRKEVFPLGGVGASPSLTTSCSSTASTSFSEPAEPRLG 417

Query: 307 VKAPSGAKAYTGTVIS 260
                  +A    V+S
Sbjct: 418 STKGKEPRASKDQVLS 433


>AK074783-1|BAC11207.1|  585|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90302 fis, clone NT2RP2000616, weakly similar to
           EXTENSIN PRECURSOR. ).
          Length = 585

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = -1

Query: 487 RTARETVXXXXXXXXXXXASESIRPEANRVETVGVTVIMITSCSTTAPISASRPWSRRLG 308
           R  R TV               +R E   +  VG +  + TSCS+TA  S S P   RLG
Sbjct: 358 RPRRHTVGGGEMARAPPPPRPCLRKEVFPLGGVGASPSLTTSCSSTASTSFSEPAEPRLG 417

Query: 307 VKAPSGAKAYTGTVIS 260
                  +A    V+S
Sbjct: 418 STKGKEPRASKDQVLS 433


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,681,780
Number of Sequences: 237096
Number of extensions: 936599
Number of successful extensions: 1751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1751
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)