SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0502.Seq
         (520 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.    33   0.60 
BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.     33   0.60 
AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated prot...    33   0.60 
AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated prot...    32   1.0  
BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated prot...    31   1.8  
BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated prot...    31   1.8  
BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated prot...    31   1.8  
AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated prot...    31   1.8  
AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated prot...    31   3.2  
AF348671-1|AAL83902.1|   61|Homo sapiens metallothionein 1M prot...    30   4.2  
U95031-1|AAB65151.1|  879|Homo sapiens sublingual gland mucin pr...    30   5.6  
BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated prot...    30   5.6  
AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.           30   5.6  
AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated prot...    30   5.6  
Y09788-1|CAA70926.1|  845|Homo sapiens mucin protein.                  29   9.8  
X76717-1|CAA54136.1|   61|Homo sapiens MT-1l protein protein.          29   9.8  
X65607-1|CAA46557.1|   61|Homo sapiens metallothionein IX protein.     29   9.8  
U78551-1|AAC51343.1|  390|Homo sapiens mucin MUC5B protein.            29   9.8  
BC130317-1|AAI30318.1|   49|Homo sapiens metallothionein 1D (pse...    29   9.8  
BC130315-1|AAI30316.1|   49|Homo sapiens metallothionein 1D (pse...    29   9.8  
BC037298-1|AAH37298.1|  872|Homo sapiens chromosome 5 open readi...    29   9.8  
BC032338-1|AAH32338.1|   61|Homo sapiens metallothionein 1X prot...    29   9.8  
AK127208-1|BAC86884.1|  168|Homo sapiens protein ( Homo sapiens ...    29   9.8  
AK126204-1|BAC86485.1|  326|Homo sapiens protein ( Homo sapiens ...    29   9.8  
AF348999-1|AAO32959.2|   49|Homo sapiens MTM protein.                  29   9.8  

>X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.
          Length = 175

 Score = 33.1 bits (72), Expect = 0.60
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
 Frame = +2

Query: 113 FCKLY*TCVSQNTGTCPESSC--ACPETSC---ACPETSC---ACPENSLC 241
           FC  Y +C    +GTC  S C  +C ETSC   +C ETSC   +C + S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSFC 55


>BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.
          Length = 177

 Score = 33.1 bits (72), Expect = 0.60
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
 Frame = +2

Query: 113 FCKLY*TCVSQNTGTCPESSC--ACPETSC---ACPETSC---ACPENSLC 241
           FC  Y +C    +GTC  S C  +C ETSC   +C ETSC   +C + S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSFC 55


>AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated protein
           1.8 protein.
          Length = 177

 Score = 33.1 bits (72), Expect = 0.60
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
 Frame = +2

Query: 113 FCKLY*TCVSQNTGTCPESSC--ACPETSC---ACPETSC---ACPENSLC 241
           FC  Y +C    +GTC  S C  +C ETSC   +C ETSC   +C + S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSFC 55


>AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated protein
           1.9 protein.
          Length = 141

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
 Frame = +2

Query: 113 FCKLY*TCVSQNTGTCPESSC--ACPETSC---ACPETSC---ACPENSLC 241
           FC  Y +C    +GTC  S C  +C ETSC   +C ETSC   +C + S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSCCQPSCCQTSSC 55


>BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +2

Query: 149 TGTCPESSC--ACPETSC---ACPETSCACP 226
           +GTC  S C  +C ETSC   +C ETSC  P
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSCCQP 83


>BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +2

Query: 149 TGTCPESSC--ACPETSC---ACPETSCACP 226
           +GTC  S C  +C ETSC   +C ETSC  P
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSCCQP 83


>BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +2

Query: 149 TGTCPESSC--ACPETSC---ACPETSCACP 226
           +GTC  S C  +C ETSC   +C ETSC  P
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSCCQP 83


>AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +2

Query: 149 TGTCPESSC--ACPETSC---ACPETSCACP 226
           +GTC  S C  +C ETSC   +C ETSC  P
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSCCQP 83


>AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated protein
           protein.
          Length = 202

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +2

Query: 134 CVSQNTGTCPESSCACPETSCACPETSC--ACPENSLC 241
           C S   G+C +SSC  P   C C  + C   C ++S C
Sbjct: 149 CCSSGCGSCCQSSCCNP---CCCQSSCCVPVCCQSSCC 183


>AF348671-1|AAL83902.1|   61|Homo sapiens metallothionein 1M
           protein.
          Length = 61

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +2

Query: 131 TCVSQNTGTCPESSC-ACPETSCACPETSCA-CPENSLC 241
           +C    + TC E  C +C ++ C+C    CA C    +C
Sbjct: 12  SCACTGSCTCKECKCTSCKKSCCSCCPVGCAKCAHGCVC 50


>U95031-1|AAB65151.1|  879|Homo sapiens sublingual gland mucin
           protein.
          Length = 879

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +2

Query: 149 TGTCPESSCACPETSCACPETSCACP--ENSLC 241
           T  CPE+ C C  T+  CP++   CP  + S+C
Sbjct: 608 TPCCPETVCVCNTTT--CPQSLPVCPPGQESIC 638


>BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated protein
           10-11 protein.
          Length = 298

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 137 VSQNTGTCPESSCACPETSCACPETSCACP 226
           V ++T   P SSC  P +SC   ++SC CP
Sbjct: 244 VCRSTCCVPVSSCCAPTSSC---QSSCCCP 270


>AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.
          Length = 814

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
 Frame = +2

Query: 143 QNTGTCPESSCACPETSC---ACPETSCACP 226
           Q  G C   SC   E SC    CP T CA P
Sbjct: 384 QERGLCVRCSCQAGEVSCEEQECPVTPCALP 414


>AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated protein
           protein.
          Length = 298

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 137 VSQNTGTCPESSCACPETSCACPETSCACP 226
           V ++T   P SSC  P +SC   ++SC CP
Sbjct: 244 VCRSTCCVPVSSCCAPTSSC---QSSCCCP 270


>Y09788-1|CAA70926.1|  845|Homo sapiens mucin protein.
          Length = 845

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 158 CPESSCACPETSCACPETSCACP--ENSLC 241
           CPE+ C C  T+  CP++   CP  + S+C
Sbjct: 561 CPETVCVCNTTT--CPQSLPVCPPGQESIC 588


>X76717-1|CAA54136.1|   61|Homo sapiens MT-1l protein protein.
          Length = 61

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 146 NTGTCPESSCACPETSCACPETSCACPENSLC 241
           N    P  SCAC   SC C E  C   + S C
Sbjct: 4   NCSCSPVGSCACAG-SCKCKECKCTSCKKSCC 34


>X65607-1|CAA46557.1|   61|Homo sapiens metallothionein IX protein.
          Length = 61

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 146 NTGTCPESSCACPETSCACPETSCACPENSLC 241
           N    P  SCAC   SC C E  C   + S C
Sbjct: 4   NCSCSPVGSCACAG-SCKCKECKCTSCKKSCC 34


>U78551-1|AAC51343.1|  390|Homo sapiens mucin MUC5B protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 158 CPESSCACPETSCACPETSCACP--ENSLC 241
           CPE+ C C  T+  CP++   CP  + S+C
Sbjct: 106 CPETVCVCNTTT--CPQSLPVCPPGQESIC 133


>BC130317-1|AAI30318.1|   49|Homo sapiens metallothionein 1D
           (pseudogene) protein.
          Length = 49

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 131 TCVSQNTGTCPESSCACPETSC-ACPETSCAC 223
           +C +  + TC  SSC C E  C +C +  C+C
Sbjct: 6   SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSC 36


>BC130315-1|AAI30316.1|   49|Homo sapiens metallothionein 1D
           (pseudogene) protein.
          Length = 49

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 131 TCVSQNTGTCPESSCACPETSC-ACPETSCAC 223
           +C +  + TC  SSC C E  C +C +  C+C
Sbjct: 6   SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSC 36


>BC037298-1|AAH37298.1|  872|Homo sapiens chromosome 5 open reading
           frame 25 protein.
          Length = 872

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 158 CPESSCACPETSCACPETSCACPENSL 238
           CP  +  CP  + +CP  + +CP  ++
Sbjct: 209 CPPRASPCPPRASSCPPRALSCPSQTM 235


>BC032338-1|AAH32338.1|   61|Homo sapiens metallothionein 1X
           protein.
          Length = 61

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 146 NTGTCPESSCACPETSCACPETSCACPENSLC 241
           N    P  SCAC   SC C E  C   + S C
Sbjct: 4   NCSCSPVGSCACAG-SCKCKECKCTSCKKSCC 34


>AK127208-1|BAC86884.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45275 fis, clone BRHIP3000859. ).
          Length = 168

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 164 ESSCACPETSCACPETSCACPENSL 238
           E SCA PE+S    E S   PE+SL
Sbjct: 131 EGSCAAPESSPPASEASLPAPESSL 155


>AK126204-1|BAC86485.1|  326|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44216 fis, clone THYMU3003763. ).
          Length = 326

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 158 CPESSCACPETSCACPETSCACPENSL 238
           CP  +  CP  + +CP  + +CP  ++
Sbjct: 120 CPPRASPCPPRASSCPPRALSCPSQTM 146


>AF348999-1|AAO32959.2|   49|Homo sapiens MTM protein.
          Length = 49

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 131 TCVSQNTGTCPESSCACPETSC-ACPETSCAC 223
           +C +  + TC  SSC C E  C +C +  C+C
Sbjct: 6   SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSC 36


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,108,022
Number of Sequences: 237096
Number of extensions: 272757
Number of successful extensions: 1920
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -