Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0501.Seq
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen... 33 1.2
Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for ... 33 1.2
J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein. 33 1.2
BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha... 33 1.2
BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha... 33 1.2
AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein pr... 33 1.2
AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen... 33 1.2
AC002074-1|AAS02025.1| 162|Homo sapiens unknown protein. 33 1.2
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 32 1.5
Z47362-1|CAA87440.1| 380|Homo sapiens T cell factor 1 splice fo... 32 2.0
Z47361-1|CAA87439.1| 250|Homo sapiens T cell factor 1 splice fo... 32 2.0
X63901-1|CAB56795.1| 269|Homo sapiens TCF-1 protein. 32 2.0
X59871-1|CAA42528.1| 268|Homo sapiens T cell factor 1, splice ... 32 2.0
X59870-1|CAA42527.1| 269|Homo sapiens T cell factor 1 splice f... 32 2.0
X59869-1|CAA42526.1| 269|Homo sapiens T cell factor 1, splice ... 32 2.0
BC113380-1|AAI13381.1| 1147|Homo sapiens KIAA1429 protein. 32 2.0
BC112288-1|AAI12289.1| 1147|Homo sapiens hypothetical protein LO... 32 2.0
BC072023-1|AAH72023.1| 384|Homo sapiens transcription factor 7 ... 32 2.0
BC048769-1|AAH48769.1| 384|Homo sapiens transcription factor 7 ... 32 2.0
AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein. 32 2.0
Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protei... 31 3.6
CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein. 31 3.6
BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor, argini... 31 3.6
BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein. 31 3.6
AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein. 31 3.6
AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of white-apr... 31 3.6
AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white apr... 31 3.6
AK074590-1|BAC11078.1| 159|Homo sapiens protein ( Homo sapiens ... 30 8.2
>Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen
protein.
Length = 1366
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 597 LLQRTIRSKRPAEPQPRGTRRTEPPYPPFRDGNSDPHGVP 478
L + T+R + PRG R PP PP RDG P G P
Sbjct: 25 LQEETVRKGPAGDRGPRGERG--PPGPPGRDGEDGPTGPP 62
>Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for
prepro-alpha2(I) collagen (COL1A2). ).
Length = 765
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 597 LLQRTIRSKRPAEPQPRGTRRTEPPYPPFRDGNSDPHGVP 478
L + T+R + PRG R PP PP RDG P G P
Sbjct: 25 LQEETVRKGPAGDRGPRGERG--PPGPPGRDGEDGPTGPP 62
>J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein.
Length = 1366
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 597 LLQRTIRSKRPAEPQPRGTRRTEPPYPPFRDGNSDPHGVP 478
L + T+R + PRG R PP PP RDG P G P
Sbjct: 25 LQEETVRKGPAGDRGPRGERG--PPGPPGRDGEDGPTGPP 62
>BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 597 LLQRTIRSKRPAEPQPRGTRRTEPPYPPFRDGNSDPHGVP 478
L + T+R + PRG R PP PP RDG P G P
Sbjct: 25 LQEETVRKGPAGDRGPRGERG--PPGPPGRDGEDGPTGPP 62
>BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 597 LLQRTIRSKRPAEPQPRGTRRTEPPYPPFRDGNSDPHGVP 478
L + T+R + PRG R PP PP RDG P G P
Sbjct: 25 LQEETVRKGPAGDRGPRGERG--PPGPPGRDGEDGPTGPP 62
>AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein
protein.
Length = 264
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 428 PCQSRSRTPR--S*RDAATGTPWGSELPSRKGGYGGSVRRV--PLGCGSA 565
PC R R P S DAA+GTP GS +GG G + R P G GSA
Sbjct: 11 PCPIRGRAPAALSGHDAASGTP-GSSAAQARGGGGPVIARSYGPPGGGSA 59
>AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen
protein.
Length = 1366
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 597 LLQRTIRSKRPAEPQPRGTRRTEPPYPPFRDGNSDPHGVP 478
L + T+R + PRG R PP PP RDG P G P
Sbjct: 25 LQEETVRKGPAGDRGPRGERG--PPGPPGRDGEDGPTGPP 62
>AC002074-1|AAS02025.1| 162|Homo sapiens unknown protein.
Length = 162
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 597 LLQRTIRSKRPAEPQPRGTRRTEPPYPPFRDGNSDPHGVP 478
L + T+R + PRG R PP PP RDG P G P
Sbjct: 25 LQEETVRKGPAGDRGPRGERG--PPGPPGRDGEDGPTGPP 62
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -3
Query: 579 RSKRPAEPQPR-GTRRTEPPYPPFRDGNSDPHGVPVAASLQLRGVRLR 439
R RP P P+ R+ PP PP G+ P G P A +L G LR
Sbjct: 500 RRTRPTMPPPQVSGSRSSPPAPPLPPGSGSP-GTPQALPRRLVGSSLR 546
>Z47362-1|CAA87440.1| 380|Homo sapiens T cell factor 1 splice form
E protein.
Length = 380
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVP 478
P P G + P PP N PHGVP
Sbjct: 17 PPPSGAGQHPQPQPPLHKANQPPHGVP 43
>Z47361-1|CAA87439.1| 250|Homo sapiens T cell factor 1 splice form
D protein.
Length = 250
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVP 478
P P G + P PP N PHGVP
Sbjct: 17 PPPSGAGQHPQPQPPLHKANQPPHGVP 43
>X63901-1|CAB56795.1| 269|Homo sapiens TCF-1 protein.
Length = 269
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVP 478
P P G + P PP N PHGVP
Sbjct: 17 PPPSGAGQHPQPQPPLHKANQPPHGVP 43
>X59871-1|CAA42528.1| 268|Homo sapiens T cell factor 1, splice
form C protein.
Length = 268
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVP 478
P P G + P PP N PHGVP
Sbjct: 17 PPPSGAGQHPQPQPPLHKANQPPHGVP 43
>X59870-1|CAA42527.1| 269|Homo sapiens T cell factor 1 splice form
B protein.
Length = 269
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVP 478
P P G + P PP N PHGVP
Sbjct: 17 PPPSGAGQHPQPQPPLHKANQPPHGVP 43
>X59869-1|CAA42526.1| 269|Homo sapiens T cell factor 1, splice
form A protein.
Length = 269
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVP 478
P P G + P PP N PHGVP
Sbjct: 17 PPPSGAGQHPQPQPPLHKANQPPHGVP 43
>BC113380-1|AAI13381.1| 1147|Homo sapiens KIAA1429 protein.
Length = 1147
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -3
Query: 567 PAEPQPRGTRRTEPPYPPFRDGNSDPHGVPVA 472
P PQPRG RT P PP D DP +PV+
Sbjct: 174 PPRPQPRGP-RTPPGPPPPDDDEDDPVPLPVS 204
>BC112288-1|AAI12289.1| 1147|Homo sapiens hypothetical protein
LOC25962, isoform 2 protein.
Length = 1147
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -3
Query: 567 PAEPQPRGTRRTEPPYPPFRDGNSDPHGVPVA 472
P PQPRG RT P PP D DP +PV+
Sbjct: 174 PPRPQPRGP-RTPPGPPPPDDDEDDPVPLPVS 204
>BC072023-1|AAH72023.1| 384|Homo sapiens transcription factor 7
(T-cell specific, HMG-box) protein.
Length = 384
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVP 478
P P G + P PP N PHGVP
Sbjct: 132 PPPSGAGQHPQPQPPLHKANQPPHGVP 158
>BC048769-1|AAH48769.1| 384|Homo sapiens transcription factor 7
(T-cell specific, HMG-box) protein.
Length = 384
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVP 478
P P G + P PP N PHGVP
Sbjct: 132 PPPSGAGQHPQPQPPLHKANQPPHGVP 158
>AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.
Length = 1795
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -3
Query: 567 PAEPQPRGTRRTEPPYPPFRDGNSDPHGVPVA 472
P PQPRG RT P PP D DP +PV+
Sbjct: 172 PPRPQPRGP-RTPPGPPPPDDDEDDPVPLPVS 202
>Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protein 1
protein.
Length = 701
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 570 RPAEPQPR-GTRRTEPPYPPFRDGNSDPHGVPVAASLQLRGVRLR 439
RP P P+ R+ PP PP G+ P G P A +L G LR
Sbjct: 572 RPTMPPPQVSGSRSSPPAPPLPPGSGSP-GTPQALPRRLVGSSLR 615
>CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein.
Length = 701
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 570 RPAEPQPR-GTRRTEPPYPPFRDGNSDPHGVPVAASLQLRGVRLR 439
RP P P+ R+ PP PP G+ P G P A +L G LR
Sbjct: 572 RPTMPPPQVSGSRSSPPAPPLPPGSGSP-GTPQALPRRLVGSSLR 615
>BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor,
arginine/serine-rich 16 protein.
Length = 659
Score = 31.1 bits (67), Expect = 3.6
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 341 RGGECWMSGSAKKTAKRTWRSAALIP*RNPCQSRSRTPRS*RDAATGTPWG---SELPSR 511
RGG + SG ++ R+W + R+ SRSR+ R R + G+ G S P+R
Sbjct: 389 RGGGYYRSGRHARSRSRSWSRSRS---RSRRYSRSRS-RGRRHSGGGSRDGHRYSRSPAR 444
Query: 512 KGGYGGSVRRVPLGCGSAGRFER 580
+GGYG RR S R+ R
Sbjct: 445 RGGYGPR-RRSRSRSHSGDRYRR 466
>BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein.
Length = 621
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 570 RPAEPQPR-GTRRTEPPYPPFRDGNSDPHGVPVAASLQLRGVRLR 439
RP P P+ R+ PP PP G+ P G P A +L G LR
Sbjct: 492 RPTMPPPQVSGSRSSPPAPPLPPGSGSP-GTPQALPRRLVGSSLR 535
>AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein.
Length = 594
Score = 31.1 bits (67), Expect = 3.6
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 341 RGGECWMSGSAKKTAKRTWRSAALIP*RNPCQSRSRTPRS*RDAATGTPWG---SELPSR 511
RGG + SG ++ R+W + R+ SRSR+ R R + G+ G S P+R
Sbjct: 404 RGGGYYRSGRHARSRSRSWSRSRS---RSRRYSRSRS-RGRRHSGGGSRDGHRYSRSPAR 459
Query: 512 KGGYGGSVRRVPLGCGSAGRFER 580
+GGYG RR S R+ R
Sbjct: 460 RGGYGPR-RRSRSRSHSGDRYRR 481
>AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of
white-apricot homolog 2 protein.
Length = 659
Score = 31.1 bits (67), Expect = 3.6
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 341 RGGECWMSGSAKKTAKRTWRSAALIP*RNPCQSRSRTPRS*RDAATGTPWG---SELPSR 511
RGG + SG ++ R+W + R+ SRSR+ R R + G+ G S P+R
Sbjct: 389 RGGGYYRSGRHARSRSRSWSRSRS---RSRRYSRSRS-RGRRHSGGGSRDGHRYSRSPAR 444
Query: 512 KGGYGGSVRRVPLGCGSAGRFER 580
+GGYG RR S R+ R
Sbjct: 445 RGGYGPR-RRSRSRSHSGDRYRR 466
>AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white
apricot homolog 2 protein.
Length = 659
Score = 31.1 bits (67), Expect = 3.6
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 341 RGGECWMSGSAKKTAKRTWRSAALIP*RNPCQSRSRTPRS*RDAATGTPWG---SELPSR 511
RGG + SG ++ R+W + R+ SRSR+ R R + G+ G S P+R
Sbjct: 389 RGGGYYRSGRHARSRSRSWSRSRS---RSRRYSRSRS-RGRRHSGGGSRDGHRYSRSPAR 444
Query: 512 KGGYGGSVRRVPLGCGSAGRFER 580
+GGYG RR S R+ R
Sbjct: 445 RGGYGPR-RRSRSRSHSGDRYRR 466
>AK074590-1|BAC11078.1| 159|Homo sapiens protein ( Homo sapiens
cDNA FLJ90109 fis, clone HEMBA1006544. ).
Length = 159
Score = 29.9 bits (64), Expect = 8.2
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 341 RGGECWMSGSAKKTAKRTWRSAALIP*RNPCQSRSRTPRS*RDAATGTPWG---SELPSR 511
RGG + SG ++ R+W R+ SRSR+ R R + G+ G S P+R
Sbjct: 55 RGGGYYRSGRHARSRSRSWSRPRS---RSRRYSRSRS-RGRRHSGGGSRDGHRYSRSPAR 110
Query: 512 KGGYG 526
+GGYG
Sbjct: 111 RGGYG 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,619,384
Number of Sequences: 237096
Number of extensions: 2668947
Number of successful extensions: 14235
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 12748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14153
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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