Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0501.Seq
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 32 0.41
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 31 0.54
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin ... 29 2.9
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 2.9
Z78410-8|CAB01642.1| 556|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z78410-7|CAB01635.1| 652|Caenorhabditis elegans Hypothetical pr... 28 5.0
U04995-1|AAA56868.1| 652|Caenorhabditis elegans prohormone conv... 28 5.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 5.0
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 28 6.6
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 27 8.7
U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 591 QRTIRSKRPAEPQPRGTRRTEPPYPPFRD 505
Q+ ++ K P+ P R R+ PPYPP D
Sbjct: 285 QQHMKRKTPSSPSRRSRSRSPPPYPPGHD 313
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 521 YGGSVRRVPLGCGSAGRFERIVRWSKSLIH---PQVVMTGAHIAY 646
YGG V +P+GC + R+ SLI P AH+AY
Sbjct: 27 YGGKVEDLPMGCEETAEYARLANSFASLIPSPLPSPSTPAAHLAY 71
>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
protein T24A11.1b protein.
Length = 1006
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 280 VPYYLCNKNNEGVDVNNASMTGWGVLDVRFGEEDCQENLEICCTNPITEPVPKPQPDPSK 459
+P +L ++ ++ + G+ + F EN E+C T P VPK D
Sbjct: 240 LPSWLLRADSVAQEITHIDFNRLGMSE-HFQISSVNENFEVCPTYPEKIIVPKGITDDDI 298
Query: 460 LKGCGYRN 483
KG YR+
Sbjct: 299 RKGAPYRS 306
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical
protein T24A11.1a protein.
Length = 938
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 280 VPYYLCNKNNEGVDVNNASMTGWGVLDVRFGEEDCQENLEICCTNPITEPVPKPQPDPSK 459
+P +L ++ ++ + G+ + F EN E+C T P VPK D
Sbjct: 236 LPSWLLRADSVAQEITHIDFNRLGMSE-HFQISSVNENFEVCPTYPEKIIVPKGITDDDI 294
Query: 460 LKGCGYRN 483
KG YR+
Sbjct: 295 RKGAPYRS 302
>AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin
homologous protein 1 protein.
Length = 930
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 280 VPYYLCNKNNEGVDVNNASMTGWGVLDVRFGEEDCQENLEICCTNPITEPVPKPQPDPSK 459
+P +L ++ ++ + G+ + F EN E+C T P VPK D
Sbjct: 240 LPSWLLRADSVAQEITHIDFNRLGMSE-HFQISSVNENFEVCPTYPEKIIVPKGITDDDI 298
Query: 460 LKGCGYRN 483
KG YR+
Sbjct: 299 RKGAPYRS 306
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 564 AEPQPRGTRRTEPPYPPFRDGNSDPHG 484
A+P P GT PP PP +DG + P G
Sbjct: 256 AQPSPAGT--PGPPGPPGKDGEAGPDG 280
>Z78410-8|CAB01642.1| 556|Caenorhabditis elegans Hypothetical
protein C51E3.7b protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -3
Query: 507 DGNSDPHGVPVAASLQLRGVRLRLWHGFRYGISAADLQVLLAVFFAEPDIQHSPPRH--- 337
D + D HG Q+ GV L H F +G+ A V+LA+ + + SPPR+
Sbjct: 347 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAW-----KTSPPRYHCT 401
Query: 336 AGVIN 322
AG+I+
Sbjct: 402 AGLID 406
>Z78410-7|CAB01635.1| 652|Caenorhabditis elegans Hypothetical
protein C51E3.7a protein.
Length = 652
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -3
Query: 507 DGNSDPHGVPVAASLQLRGVRLRLWHGFRYGISAADLQVLLAVFFAEPDIQHSPPRH--- 337
D + D HG Q+ GV L H F +G+ A V+LA+ + + SPPR+
Sbjct: 443 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAW-----KTSPPRYHCT 497
Query: 336 AGVIN 322
AG+I+
Sbjct: 498 AGLID 502
>U04995-1|AAA56868.1| 652|Caenorhabditis elegans prohormone
convertase 2 protein.
Length = 652
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -3
Query: 507 DGNSDPHGVPVAASLQLRGVRLRLWHGFRYGISAADLQVLLAVFFAEPDIQHSPPRH--- 337
D + D HG Q+ GV L H F +G+ A V+LA+ + + SPPR+
Sbjct: 443 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAW-----KTSPPRYHCT 497
Query: 336 AGVIN 322
AG+I+
Sbjct: 498 AGLID 502
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 558 PQPRGTRRTEPPYPPFRDGNSDPHGVPVAASLQLRG 451
P PRG PP P FR G HG P RG
Sbjct: 772 PPPRGGMHHMPPPPSFRGGRGG-HGGPPPPHFDRRG 806
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 397 EICCTNPITEPVPKPQPDP 453
++ T P+ EPVP+P P+P
Sbjct: 107 KVAVTLPVPEPVPEPVPEP 125
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 579 RSKRPAEPQPRGTRRTEPPYPP 514
R P+ P P G RR+ PP PP
Sbjct: 59 RRSLPSTPLPNGHRRSLPPTPP 80
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 591 QRTIRSKRPAEPQPRGTRRTEPPYPP 514
QR RS +P+EP T T PP PP
Sbjct: 383 QRNSRSMKPSEPD-YNTYSTHPPRPP 407
>U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical
protein W06A11.4 protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 594 LQRTIRSKRPAEPQPRGTRRTEPPYPP 514
+Q+TI S +PA P P +++ P PP
Sbjct: 229 VQQTINSAQPAAPNPIAQYKSKMPPPP 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,616,628
Number of Sequences: 27780
Number of extensions: 369927
Number of successful extensions: 1653
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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