Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0499.Seq
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          80   5e-17
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          80   5e-17
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          80   5e-17
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           76   1e-15
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   6.1  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 80.2 bits (189), Expect = 5e-17
 Identities = 37/79 (46%), Positives = 56/79 (70%)
 Frame = +2

Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
           + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ EGY 
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 171

Query: 434 IGSCIKHIPIAGRNITSFI 490
           +   I  + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190



 Score = 67.7 bits (158), Expect = 3e-13
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +3

Query: 54  DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
           D ++GDEA    G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PL
Sbjct: 52  DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111

Query: 231 NTPENRE 251
           N   NRE
Sbjct: 112 NPKANRE 118


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 80.2 bits (189), Expect = 5e-17
 Identities = 37/79 (46%), Positives = 56/79 (70%)
 Frame = +2

Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
           + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ EGY 
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 171

Query: 434 IGSCIKHIPIAGRNITSFI 490
           +   I  + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190



 Score = 67.7 bits (158), Expect = 3e-13
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +3

Query: 54  DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
           D ++GDEA    G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PL
Sbjct: 52  DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111

Query: 231 NTPENRE 251
           N   NRE
Sbjct: 112 NPKANRE 118


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 80.2 bits (189), Expect = 5e-17
 Identities = 37/79 (46%), Positives = 56/79 (70%)
 Frame = +2

Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
           + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ EGY 
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 171

Query: 434 IGSCIKHIPIAGRNITSFI 490
           +   I  + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190



 Score = 67.7 bits (158), Expect = 3e-13
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +3

Query: 54  DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
           D ++GDEA    G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PL
Sbjct: 52  DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111

Query: 231 NTPENRE 251
           N   NRE
Sbjct: 112 NPKANRE 118


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 75.8 bits (178), Expect = 1e-15
 Identities = 35/79 (44%), Positives = 55/79 (69%)
 Frame = +2

Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
           + +IMFE+F  P +Y+A+QAVL+L AS ++        TG+V+DSGDGV+H VP+ EGY 
Sbjct: 120 MTQIMFETFAAPAVYVAIQAVLSLYASGRT--------TGVVLDSGDGVSHTVPIYEGYA 171

Query: 434 IGSCIKHIPIAGRNITSFI 490
           +   I  + +AGR++T ++
Sbjct: 172 LPHAILRMDLAGRDLTDYL 190



 Score = 67.7 bits (158), Expect = 3e-13
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +3

Query: 54  DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
           D ++GDEA    G  ++KYP+ HGI+ +WD ME+      +  LR  PE+H  L+TE PL
Sbjct: 52  DAYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111

Query: 231 NTPENRE 251
           N   NRE
Sbjct: 112 NPKSNRE 118


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 4/25 (16%)
 Frame = +1

Query: 358 THLHWHRSRQRRWRY----SHCSSC 420
           T +HWH   QRR  Y     H S C
Sbjct: 376 TTIHWHGLHQRRTPYMDGVPHVSQC 400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,787
Number of Sequences: 2352
Number of extensions: 12474
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)