Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0499.Seq
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 143 1e-34
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 82 4e-16
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 82 4e-16
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 81 5e-16
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 81 5e-16
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 81 5e-16
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 81 5e-16
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 81 5e-16
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 81 5e-16
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 81 5e-16
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 81 5e-16
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 80 1e-15
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 52 3e-07
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 41 8e-04
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 41 8e-04
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 41 8e-04
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 38 0.006
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 36 0.018
U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane r... 29 3.7
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 29 3.7
AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell... 29 3.7
AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical ... 28 6.4
AC024793-2|AAT39976.1| 338|Caenorhabditis elegans Hypothetical ... 28 6.4
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z29094-1|CAA82338.1| 147|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF303257-1|AAG50215.1| 147|Caenorhabditis elegans G10 protein h... 27 8.4
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 143 bits (346), Expect = 1e-34
Identities = 67/103 (65%), Positives = 81/103 (78%)
Frame = +2
Query: 257 AEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVI 436
AEIMFESFNVPGLYIAVQAVLAL ASW SR + ER+ TG+V+DSGDGVTH +PVA+GYVI
Sbjct: 134 AEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVI 193
Query: 437 GSCIKHIPIAGRNITSFIQXXXXXXXXXXXXXKVWKLPKLLKQ 565
GSCIKHIPIAGR+IT FIQ + +++ K++K+
Sbjct: 194 GSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKE 236
Score = 140 bits (338), Expect = 1e-33
Identities = 61/78 (78%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
Frame = +3
Query: 27 RMTKAVEDLDFFIGDEAFE--ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPED 200
R+ ++DLDFFIGDEA AT Y+VKYP+RHGIVEDWDLMERY EQC+FKYLRAEPED
Sbjct: 55 RVGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPED 114
Query: 201 HHFLMTEPPLNTPENREY 254
H FL+TEPPLNTPENREY
Sbjct: 115 HFFLLTEPPLNTPENREY 132
Score = 67.3 bits (157), Expect = 9e-12
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +1
Query: 478 YFIYSIITP*REVGIPPEQSLETAKAIKAKYSYICPDIAKEFAKYDSDPGKW 633
YFI S++ RE IP EQS E AK IK K+ Y+CPD+ KEF KYD+D KW
Sbjct: 209 YFIQSLLRD-REHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAAKW 259
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIYEGYA 171
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 231 NTPENRE 251
N NRE
Sbjct: 112 NPKANRE 118
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIYEGYA 171
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 231 NTPENRE 251
N NRE
Sbjct: 112 NPKANRE 118
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 231 NTPENRE 251
N NRE
Sbjct: 112 NPKANRE 118
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 231 NTPENRE 251
N NRE
Sbjct: 112 NPKANRE 118
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 231 NTPENRE 251
N NRE
Sbjct: 112 NPKANRE 118
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 231 NTPENRE 251
N NRE
Sbjct: 112 NPKANRE 118
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 231 NTPENRE 251
N NRE
Sbjct: 112 NPKANRE 118
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 76 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 127
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 128 LPHAILRLDLAGRDLTDYL 146
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 8 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 67
Query: 231 NTPENRE 251
N NRE
Sbjct: 68 NPKANRE 74
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 106 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 157
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 158 LPHAILRLDLAGRDLTDYL 176
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 38 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 97
Query: 231 NTPENRE 251
N NRE
Sbjct: 98 NPKANRE 104
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 172 LPHAILRLDLAGRDLTDYL 190
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
Query: 231 NTPENRE 251
N NRE
Sbjct: 112 NPKANRE 118
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 80.2 bits (189), Expect = 1e-15
Identities = 42/120 (35%), Positives = 70/120 (58%)
Frame = +2
Query: 257 AEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVI 436
AEI FE+FNVP LYI +QAVL+L A+ ++ TG+V+DSGDGVTH VP+ +G+ +
Sbjct: 124 AEIFFETFNVPALYIQMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIVKGFAM 175
Query: 437 GSCIKHIPIAGRNITSFIQXXXXXXXXXXXXXKVWKLPKLLKQNTVISVLTLLKNLPNTI 616
I+ + +AGR++T +++ +++ + +K+N L K N++
Sbjct: 176 KHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALDPTKVENNSV 235
Score = 58.4 bits (135), Expect = 4e-09
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +3
Query: 6 VGDQSTRRMTKAVEDLDFFIGDEAFEATG-YSVKYPVRHGIVEDWDLMERYIEQCVF--K 176
VG R+ D D FIG +A G +S++YP+ HGIV +W ME+ I + +F
Sbjct: 38 VGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEK-IWEYIFGQD 96
Query: 177 YLRAEPEDHHFLMTEPPLNTPENRE 251
L+ PE+H L+T+ PLN +NRE
Sbjct: 97 QLKIFPEEHPVLLTDAPLNPLKNRE 121
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+ +QAVL+L AS ++ TGIV+D+GDGVTH VP+ EGY
Sbjct: 119 MTQIMFETFNTPAMYVNIQAVLSLYASGRT--------TGIVLDTGDGVTHTVPIYEGYA 170
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I+ + +AGR++T ++
Sbjct: 171 LPHAIQRLDLAGRDLTDYM 189
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 51 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 110
Query: 231 NTPENRE 251
N NRE
Sbjct: 111 NPKSNRE 117
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 70.9 bits (166), Expect = 7e-13
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +2
Query: 233 HSRKQRILAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIV 412
+S ++++ ++MFE + +Y+AVQAVL L A + TG+VVDSGDGVTHI
Sbjct: 117 NSNREKMF-QVMFEQYGFNSIYVAVQAVLTLYA--------QGLLTGVVVDSGDGVTHIC 167
Query: 413 PVAEGYVIGSCIKHIPIAGRNITSFI 490
PV EG+ + + + IAGR+IT ++
Sbjct: 168 PVYEGFALHHLTRRLDIAGRDITKYL 193
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 15 QSTRRMTKAVEDLDFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVF-KYLRA 188
+ST+R+ +E D +G+E + + YP+ +GIV +WD M + + L
Sbjct: 42 RSTQRVGN-IEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDI 100
Query: 189 EPEDHHFLMTEPPLNTPENRE 251
+P++ L+TEPPLN NRE
Sbjct: 101 DPKECKLLLTEPPLNPNSNRE 121
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/90 (37%), Positives = 48/90 (53%)
Frame = +2
Query: 212 NDRASAQHSRKQRILAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSG 391
NDRA R+++ L EIMFE F VP Y++ VL+ A ++ G++VDSG
Sbjct: 134 NDRA-----RREK-LTEIMFEKFQVPAYYLSKNVVLSCFAQGRTH--------GLMVDSG 179
Query: 392 DGVTHIVPVAEGYVIGSCIKHIPIAGRNIT 481
T +VPV +GY + + PI G IT
Sbjct: 180 ATQTSVVPVFDGYAVTHAVVKCPIGGDLIT 209
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 111 VRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENRE 251
++ G++EDW+L E+ +E L + P +H L +E N RE
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARRE 140
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMER 152
D ++GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMER 152
D ++GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMER 152
D ++GDEA G ++KYP+ HGIV +WD ME+
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLM 146
D ++GDEA G ++KYP+ HGIV +WD M
Sbjct: 52 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 368 TGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGRNI 478
TG+VVD G+ V +IVPV +GYV+ S I IP + +
Sbjct: 322 TGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQM 357
>U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane
receptor LIN-17 protein.
Length = 558
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 448 KTHPYCW*KHYFIYSIITP*REVGIPPEQSLETAKAIKAKYSYICPDIAKEF 603
K HP+ H+FI S+ P +G+P Q++ + K++ + C I +EF
Sbjct: 72 KCHPHI---HFFICSVFAPMCPIGMP--QAVTSCKSVCEQVKADCFSILEEF 118
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 448 KTHPYCW*KHYFIYSIITP*REVGIPPEQSLETAKAIKAKYSYICPDIAKEF 603
K HP+ H+FI S+ P +G+P Q++ + K++ + C I +EF
Sbjct: 72 KCHPHI---HFFICSVFAPMCPIGMP--QAVTSCKSVCEQVKADCFSILEEF 118
>AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform a protein.
Length = 558
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 448 KTHPYCW*KHYFIYSIITP*REVGIPPEQSLETAKAIKAKYSYICPDIAKEF 603
K HP+ H+FI S+ P +G+P Q++ + K++ + C I +EF
Sbjct: 72 KCHPHI---HFFICSVFAPMCPIGMP--QAVTSCKSVCEQVKADCFSILEEF 118
>AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical
protein M70.4 protein.
Length = 822
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 204 DDLRVPHGDT*TRTVRCTFPLNPSLLRYRGAQDTLQSI 91
+DL +P G+ + +F L SL ++ G +DT S+
Sbjct: 418 EDLNIPQGNNWANPIHTSFCLPKSLHKWAGRRDTSSSM 455
>AC024793-2|AAT39976.1| 338|Caenorhabditis elegans Hypothetical
protein Y48G1BL.7 protein.
Length = 338
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 474 FLPAIGMCFIHDPITYPSATGTM 406
FL AI MCF+HDP T+ + T+
Sbjct: 96 FLTAI-MCFLHDPQTFKDSNRTL 117
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 283 CARPLHCCTSRSCF-GCVMEVTYV 351
CA PL C S CF GCV YV
Sbjct: 582 CANPLGRCGSGQCFSGCVCRQPYV 605
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 283 CARPLHCCTSRSCF-GCVMEVTYV 351
CA PL C S CF GCV YV
Sbjct: 373 CANPLGRCGSGQCFSGCVCRQPYV 396
>Z29094-1|CAA82338.1| 147|Caenorhabditis elegans Hypothetical
protein C07A9.2 protein.
Length = 147
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 111 VRHGIVEDWDLMERYIEQCVFKYLRAEPEDH 203
VR E WDL+E +EQ K AE E H
Sbjct: 10 VRKSPPEGWDLIEPTLEQFEAKMREAETEPH 40
>AF303257-1|AAG50215.1| 147|Caenorhabditis elegans G10 protein
homolog protein.
Length = 147
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 111 VRHGIVEDWDLMERYIEQCVFKYLRAEPEDH 203
VR E WDL+E +EQ K AE E H
Sbjct: 10 VRKSPPEGWDLIEPTLEQFEAKMREAETEPH 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,383,286
Number of Sequences: 27780
Number of extensions: 297738
Number of successful extensions: 726
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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