Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0499.Seq
(633 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 114 5e-26
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 80 1e-15
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 80 1e-15
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 79 3e-15
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 79 3e-15
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 78 4e-15
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 78 4e-15
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 77 1e-14
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 77 1e-14
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 77 1e-14
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 75 3e-14
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 74 7e-14
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 69 2e-12
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 65 3e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 53 1e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 52 3e-07
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 47 9e-06
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 46 2e-05
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 36 0.017
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 36 0.017
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 34 0.090
At1g56240.1 68414.m06465 SKP1 interacting partner 3-related cont... 30 1.5
At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone... 29 1.9
At2g02640.1 68415.m00203 DC1 domain-containing protein contain... 29 2.6
At2g02610.1 68415.m00200 DC1 domain-containing protein contain... 29 2.6
At5g58610.1 68418.m07345 PHD finger transcription factor, putative 27 7.8
At4g12870.1 68417.m02015 gamma interferon responsive lysosomal t... 27 7.8
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 114 bits (274), Expect = 5e-26
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = +2
Query: 185 CGTRRSSFLNDRASAQHSRKQRILAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERT 364
C FL + + EI+FE+FNVPGLYIAV +VLALAA + T+++
Sbjct: 115 CDPEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGY---TTSKCE 171
Query: 365 FTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQ 493
TG+VVD GDG TH+VPVAEGYVIGSCIK IPIAG+++T FIQ
Sbjct: 172 MTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQ 214
Score = 103 bits (247), Expect = 1e-22
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Frame = +3
Query: 21 TRRMTKAVEDLDFFIGDEAF----EATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRA 188
T+ DLDF+IGDEA ++ +++ YP+ HG VEDWD MERY +QC+F YLR
Sbjct: 56 TQHNAGVAADLDFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRC 115
Query: 189 EPEDHHFLMTEPPLNTPENREY 254
+PEDH+FL+TE PL PE+REY
Sbjct: 116 DPEDHYFLLTESPLTPPESREY 137
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 508 REVGIPPEQSLETAKAIKAKYSYICPDIAKEFAKYDSDPGKW 633
R IPPE S + A+ +K Y Y C DI KEF K+D +P K+
Sbjct: 220 RGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKY 261
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 172
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 173 LPHAILRLDLAGRDLTDYL 191
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 79.8 bits (188), Expect = 1e-15
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FNVP +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 172
Query: 434 IGSCIKHIPIAGRNIT 481
+ I + +AGR++T
Sbjct: 173 LPHAILRLDLAGRDLT 188
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 78.6 bits (185), Expect = 3e-15
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 172
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T +
Sbjct: 173 LPHAILRLDLAGRDLTDHL 191
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 78.6 bits (185), Expect = 3e-15
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 172
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T +
Sbjct: 173 LPHAILRLDLAGRDLTDHL 191
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 78.2 bits (184), Expect = 4e-15
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 172
Query: 434 IGSCIKHIPIAGRNIT 481
+ I + +AGR++T
Sbjct: 173 LPHAILRLDLAGRDLT 188
Score = 68.5 bits (160), Expect = 3e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 78.2 bits (184), Expect = 4e-15
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EGY
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 172
Query: 434 IGSCIKHIPIAGRNIT 481
+ I + +AGR++T
Sbjct: 173 LPHAILRLDLAGRDLT 188
Score = 68.5 bits (160), Expect = 3e-12
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EG+
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGFS 172
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 173 LPHAILRLDLAGRDLTDYL 191
Score = 67.3 bits (157), Expect = 8e-12
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HG+V +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EG+
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGFS 172
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 173 LPHAILRLDLAGRDLTDYL 191
Score = 67.3 bits (157), Expect = 8e-12
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HG+V +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGV+H VP+ EG+
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGFS 172
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 173 LPHAILRLDLAGRDLTDYL 191
Score = 67.3 bits (157), Expect = 8e-12
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D ++GDEA G ++KYP+ HG+V +WD ME+ + LR PE+H L+TE PL
Sbjct: 53 DAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 112
Query: 231 NTPENRE 251
N NRE
Sbjct: 113 NPKANRE 119
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFESF P +YI +QAVL+L +S ++ TGIV+DSGDGV+H VP+ EGY
Sbjct: 122 MTQIMFESFAFPSMYIGIQAVLSLYSSGRT--------TGIVLDSGDGVSHTVPIYEGYA 173
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T ++
Sbjct: 174 LPHAILRLDLAGRDLTEYL 192
Score = 74.9 bits (176), Expect = 4e-14
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 VGDQSTRRMTKAVEDLDFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYL 182
VG R + +++ D F+GDEA G S+KYP+ HG+V +WD ME+ + L
Sbjct: 38 VGRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNEL 97
Query: 183 RAEPEDHHFLMTEPPLNTPENRE 251
R EPE+H L+TE PLN NRE
Sbjct: 98 RLEPEEHPILLTEAPLNPKVNRE 120
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +2
Query: 236 SRKQRILAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVP 415
S+ + + E MFE +N G++I +QAVL L A + TG+V+DSGDGVTH+VP
Sbjct: 114 SKNREKMIETMFEKYNFAGVFIQIQAVLTLYA--------QGLLTGLVIDSGDGVTHVVP 165
Query: 416 VAEGYVIGSCIKHIPIAGRNITSFI 490
V +GY K + +AGR+IT+++
Sbjct: 166 VVDGYSFPHLTKRMNVAGRHITAYL 190
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D +G+ E + YPV +GIV++WD ME + + L+ P D L+T+PPL
Sbjct: 52 DIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPL 111
Query: 231 NTPENRE 251
N +NRE
Sbjct: 112 NPSKNRE 118
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFE+F VP +YI +QA L+L AS ++ TG V+DSGDGV++IVP+ EG
Sbjct: 76 MTQIMFETFAVPSMYIGMQAALSLHASGRT--------TGTVLDSGDGVSYIVPIYEGSA 127
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + +AGR++T+++
Sbjct: 128 LPHAILRLDLAGRHLTNYL 146
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 230
D F+GD+A +G ++ YP+ HG+V +WD ME+ + LR PE+H L+TE PL
Sbjct: 8 DLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPL 67
Query: 231 NTPENRE 251
N +RE
Sbjct: 68 NPKADRE 74
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/79 (39%), Positives = 53/79 (67%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
+ +IMFESF+VP +Y+++Q+VL L +S ++ TG+V+D G+ V+H VPV EGY
Sbjct: 110 MTQIMFESFDVPAMYVSMQSVLYLYSSGRT--------TGVVLDLGERVSHTVPVYEGYA 161
Query: 434 IGSCIKHIPIAGRNITSFI 490
+ I + + GR++T ++
Sbjct: 162 LPHGILRLDLGGRDLTDYL 180
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 FIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNT 236
++G+E ++K P+ HGIV +WD ME+ + LR +PE+H L+TE P N
Sbjct: 44 YVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNP 103
Query: 237 PENRE 251
NRE
Sbjct: 104 KANRE 108
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 FIGDEA--FEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLN 233
++G +A + V P++ GIV DWDL++ E L +P +H L+ EPPLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 234 TPENRE 251
T + RE
Sbjct: 136 TQQQRE 141
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +2
Query: 257 AEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVI 436
AE+MFE + VP L++A VL A+ ++ T +VVD G G T I PV +GYV+
Sbjct: 144 AELMFEKYKVPALFMAKNPVLTSFATGRA--------TSLVVDCGGGSTTISPVHDGYVL 195
Query: 437 GSCIKHIPIAGRNIT 481
+ P+ G +T
Sbjct: 196 QKAVVSSPLGGEFLT 210
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 52.0 bits (119), Expect = 3e-07
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2
Query: 200 SSFLNDRASAQHSRKQRILAEIMFESFNVPGLYIA-VQAVLAL-AASWKSRTSAERTFTG 373
SS L A QR E++FE F LYIA Q+++ L AS + + +T
Sbjct: 95 SSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCS 154
Query: 374 IVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGRNITSFIQ 493
+VVD G TH VPV + + IK I + G+ T++++
Sbjct: 155 LVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLK 194
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +3
Query: 63 IGDEAFEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTP 239
+ DE + T +V+ P+ G + + DL L P L+TE PL+ P
Sbjct: 50 LSDE-IDLTSAAVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIP 107
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 FIGDEA--FEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLN 233
+ G +A F + P + GIV DWD+++ + L +P +H L+ EPPLN
Sbjct: 70 YTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLN 129
Query: 234 TPENRE 251
+ + RE
Sbjct: 130 SQQQRE 135
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/76 (38%), Positives = 38/76 (50%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 433
L ++MFE+FNV G Y + QAVL+L A + +G VD G G I PV EG V
Sbjct: 107 LVQLMFETFNVSGFYASEQAVLSLYAVGR--------ISGCTVDIGHGKIDIAPVLEGAV 158
Query: 434 IGSCIKHIPIAGRNIT 481
K + G +T
Sbjct: 159 QHIASKRFELGGTELT 174
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 108 PVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPE 242
P+ G++ DWD ME + V+ L E + ++ PL TP+
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPK 101
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 36.3 bits (80), Expect = 0.017
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +2
Query: 212 NDRASAQHSRKQRILA--EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVD 385
+D SA+ SR+Q A ++F+ NVP + QAVLAL A A RT +GIVV+
Sbjct: 206 DDTESAKASRRQLKTAIFNVLFD-MNVPAVCAVNQAVLALYA-------ARRT-SGIVVN 256
Query: 386 SGDGVTHIVPVAEGYVIGSC-IKHIPIAGRNITSFIQ 493
G V I+P+ G V+ ++ I +T F++
Sbjct: 257 IGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLK 293
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 36.3 bits (80), Expect = 0.017
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +2
Query: 212 NDRASAQHSRKQRILA--EIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVD 385
+D SA+ SR+Q A ++F+ NVP + QAVLAL A A RT +GIVV+
Sbjct: 206 DDTESAKASRRQLKTAIFNVLFD-MNVPAVCAVNQAVLALYA-------ARRT-SGIVVN 256
Query: 386 SGDGVTHIVPVAEGYVIGSC-IKHIPIAGRNITSFIQ 493
G V I+P+ G V+ ++ I +T F++
Sbjct: 257 IGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLK 293
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 33.9 bits (74), Expect = 0.090
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 LAEIMFESFNVPGLYIAVQAVLALAASWK-SRTSAERTFTGIVVDSGDGVTHIVPVAEGY 430
+AE++FE++ VP + V A A S+K ++ GIV+ G TH +P +G
Sbjct: 135 MAELLFETYGVPAVAFGVDA----AFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGE 190
Query: 431 VIGSCIKHIPIAGRNITSFIQ 493
I I G ++T +++
Sbjct: 191 PIYKGSSRTNIGGYHVTDYLK 211
>At1g56240.1 68414.m06465 SKP1 interacting partner 3-related
contains similarity to SKP1 interacting partner 3
GI:10716951 from [Arabidopsis thaliana]
Length = 284
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3
Query: 466 SNRDVFYT*SNNISFCNWNNVSNA 395
S RD+ T S++ S+C+W+NVS++
Sbjct: 100 SARDISITYSDHASYCSWSNVSDS 123
>At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone
isomerase (CHI) identical to SP|P41088
Length = 246
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 269 FESFNVPGLYIAVQAVLALAASWKSRTSAERT 364
F F V G+Y+ AV +L+ WK +T+ E T
Sbjct: 55 FVIFTVIGVYLEGNAVPSLSVKWKGKTTEELT 86
>At2g02640.1 68415.m00203 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 627
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 313 RSCFGCVMEVTYVC*THLHWHRSRQRRWRYSHCSSCRRICYWIMY 447
+ C C +E++Y T H + ++R+ HC CR+ +++Y
Sbjct: 143 KECVECPLEISYPTHTK-HSLQLFYSKYRFDHCIYCRKRATYMIY 186
>At2g02610.1 68415.m00200 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 627
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 313 RSCFGCVMEVTYVC*THLHWHRSRQRRWRYSHCSSCRRICYWIMY 447
+ C C +E++Y T H + ++R+ HC CR+ +++Y
Sbjct: 143 KECVECPLEISYPTHTK-HSLQLFYSKYRFDHCIYCRKRATYMIY 186
>At5g58610.1 68418.m07345 PHD finger transcription factor, putative
Length = 1065
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 159 RCTFPLNPSLLRYRGAQDTLQSIL 88
+C +PS LRY GA D+L IL
Sbjct: 763 QCELKYHPSCLRYDGACDSLDKIL 786
>At4g12870.1 68417.m02015 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 229
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 125 DTVAHRILYRVSC-GFKSFITDEKIQIFDS 39
D V + Y C G +SFI DE +++FDS
Sbjct: 31 DKVELNLYYESLCPGCQSFIVDELVKVFDS 60
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,571,247
Number of Sequences: 28952
Number of extensions: 274177
Number of successful extensions: 715
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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