Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0498.Seq
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   120   1e-29
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   120   1e-29
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    85   7e-19
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.14 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.1  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  120 bits (288), Expect = 1e-29
 Identities = 55/84 (65%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
           K+K D++ N RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N 
Sbjct: 76  KHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINM 135

Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
           D F+  ++PV+K L+DAK+ K+ +
Sbjct: 136 DYFKKCIDPVDKVLQDAKIGKSAV 159



 Score = 58.8 bits (136), Expect = 4e-11
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +1

Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 360
           +IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 161 EIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  120 bits (288), Expect = 1e-29
 Identities = 55/84 (65%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
           K+K D++ N RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N 
Sbjct: 76  KHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINM 135

Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
           D F+  ++PV+K L+DAK+ K+ +
Sbjct: 136 DYFKKCIDPVDKVLQDAKIGKSAV 159



 Score = 58.8 bits (136), Expect = 4e-11
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +1

Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 360
           +IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 161 EIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 84.6 bits (200), Expect = 7e-19
 Identities = 41/84 (48%), Positives = 59/84 (70%)
 Frame = +2

Query: 2   KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
           K+KKD+  +K+AL++LR   E+AKR LSS  + ++ I++L    DF  ++TRA+FEELN 
Sbjct: 75  KHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELNN 134

Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
           D F  T++PV+K L DA M K QI
Sbjct: 135 DQFLKTLKPVKKVLEDADMTKDQI 158



 Score = 64.9 bits (151), Expect = 6e-13
 Identities = 27/35 (77%), Positives = 34/35 (97%)
 Frame = +1

Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 360
           +IVLVGGSTRIPK+Q+L++DFF+GKELN+ INPDE
Sbjct: 160 EIVLVGGSTRIPKIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -1

Query: 254 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 153
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 304 LLQDFFNGKELNKSINPDE 360
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +1

Query: 181 RSVQVYHGASGEVSP*CQDG*GSNPDIVLVGGSTRIPKVQKLLQDFFNGKELN 339
           R V  +  A+G      +D   +NPDI +  G+  I  +QK  + ++  + +N
Sbjct: 727 RPVVTWKRATGVSPGDYKDFKPNNPDIKVEDGTLTINNIQKTNEGYYLCEAVN 779


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 641 QLEFTEQVVIFGHSTLTLKYLDEYSGLV 558
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,024
Number of Sequences: 336
Number of extensions: 3175
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)