Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0498.Seq
(680 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 141 1e-34
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 140 2e-34
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 108 8e-25
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 83 5e-17
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 61 2e-10
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 60 4e-10
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 59 7e-10
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 58 1e-09
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.47
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 4.4
SPCC4B3.06c |||NADPH-dependent FMN reductase |Schizosaccharomyce... 26 5.8
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 7.7
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 25 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 141 bits (341), Expect = 1e-34
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
K KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL A
Sbjct: 246 KNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCA 305
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
DLFR TMEPVE+ LRD+K+DKA +
Sbjct: 306 DLFRKTMEPVERVLRDSKVDKASV 329
Score = 97.9 bits (233), Expect = 1e-21
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXX 435
+IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE +L GD SE+ QD
Sbjct: 331 EIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLL 390
Query: 436 XXXXXXXXXGIETAGGVMTTLIKRTLPSPLNR 531
GIETAGGVMT LIKR P +
Sbjct: 391 LLDVAPLSMGIETAGGVMTPLIKRNTTIPTKK 422
Score = 89.4 bits (212), Expect = 4e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 549 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQI
Sbjct: 429 YSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQI 472
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 140 bits (339), Expect = 2e-34
Identities = 68/84 (80%), Positives = 76/84 (90%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
K KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL A
Sbjct: 246 KNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCA 305
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
DLFR+TMEPVEK LRD+K+DK+ +
Sbjct: 306 DLFRNTMEPVEKVLRDSKIDKSSV 329
Score = 97.5 bits (232), Expect = 2e-21
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXX 435
+IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE IL GD SE+ QD
Sbjct: 331 EIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLL 390
Query: 436 XXXXXXXXXGIETAGGVMTTLIKRTLPSPLNR 531
GIETAGGVMT LIKR P +
Sbjct: 391 LLDVAPLSLGIETAGGVMTPLIKRNTTIPTKK 422
Score = 88.2 bits (209), Expect = 1e-18
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +3
Query: 549 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQI
Sbjct: 429 YADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQI 472
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 108 bits (259), Expect = 8e-25
Identities = 50/84 (59%), Positives = 68/84 (80%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
K K D++ + RALRRLR+ACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA
Sbjct: 250 KQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINA 309
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
F++T++PV K L+D+K+ KA +
Sbjct: 310 TTFKATIDPVAKVLKDSKVPKADV 333
Score = 72.9 bits (171), Expect = 4e-14
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDX 432
DIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE +L + S++ QD
Sbjct: 335 DIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDL 394
Query: 433 XXXXXXXXXXGIETAGGVMTTLIKRTLPSPLNRLR 537
G+ G V + R P P + R
Sbjct: 395 LLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKR 429
Score = 49.6 bits (113), Expect = 4e-07
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 552 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
+DNQ V V++GER +N LG+F+LTGIPP PRG ++
Sbjct: 435 ADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAEL 477
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 82.6 bits (195), Expect = 5e-17
Identities = 37/84 (44%), Positives = 59/84 (70%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
K D+ + +A+ +L+ E+AKRTLSS IEI+S F G DF +++RA+FEE+N
Sbjct: 278 KNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINM 337
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
DLF+ T++PVE+ L+D+ + K++I
Sbjct: 338 DLFKKTLKPVEQVLKDSNLKKSEI 361
Score = 78.2 bits (184), Expect = 1e-15
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3
Query: 555 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQI
Sbjct: 460 DNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQI 501
Score = 77.0 bits (181), Expect = 2e-15
Identities = 43/92 (46%), Positives = 53/92 (57%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXX 435
DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE +L G++ + +
Sbjct: 363 DIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIV 419
Query: 436 XXXXXXXXXGIETAGGVMTTLIKRTLPSPLNR 531
GIET GGVMT LI R P P +
Sbjct: 420 LLDVIPLTLGIETTGGVMTKLIGRNTPIPTRK 451
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 60.9 bits (141), Expect = 2e-10
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
K+ DL+ N RAL RL R K LS++++A I+ L +GIDF ITR+ E L
Sbjct: 282 KHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCK 341
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
D+ + +EP+ K+L+ A + ++I
Sbjct: 342 DMEDAAVEPINKALKKANLTFSEI 365
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 259 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 360
I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 368 IILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 59.7 bits (138), Expect = 4e-10
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +3
Query: 552 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
+D Q V I+VF+GER + +DN L+G F+LTGI PAP+G PQI
Sbjct: 473 ADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQI 515
Score = 54.0 bits (124), Expect = 2e-08
Identities = 32/92 (34%), Positives = 45/92 (48%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXX 435
+++LVGG TR+P+V + ++ F +E KS+NPDE +L G V+D
Sbjct: 379 EVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLV 433
Query: 436 XXXXXXXXXGIETAGGVMTTLIKRTLPSPLNR 531
GIET GGV T LI R P +
Sbjct: 434 LLDVTPLSLGIETLGGVFTRLINRNTTIPTRK 465
Score = 48.0 bits (109), Expect = 1e-06
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +2
Query: 14 DLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNA 181
DL+ ++ A++R+R A E+AK LSS ++ I + + I+RA+FE+L
Sbjct: 294 DLSKDRLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVD 353
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
L R T++P +++L+DA + ++I
Sbjct: 354 PLVRRTIDPCKRALKDANLQTSEI 377
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 58.8 bits (136), Expect = 7e-10
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
KYK D+ +N +A RL TA ER K+ LS++ A + ++ + ID + I R+ FEEL
Sbjct: 254 KYKIDVLSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIK 313
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
L P+EK+L A + K +
Sbjct: 314 PLLERLTPPIEKALELAGIKKEDL 337
Score = 33.5 bits (73), Expect = 0.029
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +1
Query: 259 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 360
I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 340 IEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 58.0 bits (134), Expect = 1e-09
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +2
Query: 14 DLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFR 193
D N R+L +LR CE KR LS+ T AS +DSL +GIDF++SI R R++ +
Sbjct: 276 DPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLN 335
Query: 194 STMEPVEKSLRDAKMDKAQI 253
+ V +++ A M+ I
Sbjct: 336 RMADLVTEAVEKANMEPFDI 355
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.47
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 128
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 508 TLPSPLNRLRHSPPTLITNPEYSSKYLR 591
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPCC4B3.06c |||NADPH-dependent FMN reductase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 200
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 548 GGECLSLFSGDGSVRLMSVVMTPPAVSIPRER 453
GG+C S M V T PA+++PR++
Sbjct: 131 GGDCASQLKHVAGFLKMRVAPTMPALTLPRDK 162
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.4 bits (53), Expect = 7.7
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 248 EPYPSWHHGETSPLAP 201
+P P+ HG+TSPL+P
Sbjct: 423 KPMPTSIHGQTSPLSP 438
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 116 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 247
SL G+D+YT I E +A +S+ E +K D + D++
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRS 372
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,815,210
Number of Sequences: 5004
Number of extensions: 55562
Number of successful extensions: 220
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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